RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 PDE3BQ13370 1112 aa18.01■□□□□ 0.47
GTF3C1-203ENST00000562609 CENPQQ7L2Z9 268 aaPredicted RBP18■□□□□ 0.47
GTF3C1-203ENST00000562609 RGS3P49796 1198 aa17.99■□□□□ 0.47
GTF3C1-203ENST00000562609 IDI1Q13907 227 aa17.99■□□□□ 0.47
GTF3C1-203ENST00000562609 C20orf194Q5TEA3 1177 aa17.98■□□□□ 0.47
GTF3C1-203ENST00000562609 RICTORQ6R327 1708 aa17.98■□□□□ 0.47
GTF3C1-203ENST00000562609 EIF3AQ14152 1382 aaKnown RBP17.98■□□□□ 0.47
GTF3C1-203ENST00000562609 FBXO31Q5XUX0 539 aaPredicted RBP17.98■□□□□ 0.47
GTF3C1-203ENST00000562609 PDCL3Q9H2J4 239 aa17.98■□□□□ 0.47
GTF3C1-203ENST00000562609 SIGLEC1Q9BZZ2 1709 aa17.97■□□□□ 0.47
GTF3C1-203ENST00000562609 MLECQ14165 292 aa17.97■□□□□ 0.47
GTF3C1-203ENST00000562609 CDCA8Q53HL2 280 aa17.97■□□□□ 0.47
GTF3C1-203ENST00000562609 MYOM2P54296 1465 aa17.97■□□□□ 0.47
GTF3C1-203ENST00000562609 FSD2A1L4K1 749 aa17.96■□□□□ 0.47
GTF3C1-203ENST00000562609 AMER1Q5JTC6 1135 aaPredicted RBP17.96■□□□□ 0.47
GTF3C1-203ENST00000562609 GZF1Q9H116 711 aaPredicted RBP17.96■□□□□ 0.47
GTF3C1-203ENST00000562609 ADGRB3O60242 1522 aa17.96■□□□□ 0.47
GTF3C1-203ENST00000562609 SAFB2Q14151 953 aaKnown RBP eCLIP17.95■□□□□ 0.46
GTF3C1-203ENST00000562609 IFT172Q9UG01 1749 aa17.94■□□□□ 0.46
GTF3C1-203ENST00000562609 CALD1Q05682 793 aaKnown RBP17.94■□□□□ 0.46
GTF3C1-203ENST00000562609 AAMPQ13685 434 aa17.94■□□□□ 0.46
GTF3C1-203ENST00000562609 PRDM4Q9UKN5 801 aa17.94■□□□□ 0.46
GTF3C1-203ENST00000562609 CAMSAP1Q5T5Y3 1602 aa17.94■□□□□ 0.46
GTF3C1-203ENST00000562609 ESPNB1AK53 854 aa17.93■□□□□ 0.46
GTF3C1-203ENST00000562609 C14orf93Q9H972 538 aaKnown RBP17.93■□□□□ 0.46
GTF3C1-203ENST00000562609 CENPJQ9HC77 1338 aaPredicted RBP17.93■□□□□ 0.46
GTF3C1-203ENST00000562609 PPP2R1AP30153 589 aa17.93■□□□□ 0.46
GTF3C1-203ENST00000562609 ERVK-7P63135 1459 aa17.92■□□□□ 0.46
GTF3C1-203ENST00000562609 BECN1Q14457 450 aa17.92■□□□□ 0.46
GTF3C1-203ENST00000562609 TPM2P07951 284 aa17.91■□□□□ 0.46
GTF3C1-203ENST00000562609 CARD14Q9BXL6 1004 aa17.91■□□□□ 0.46
GTF3C1-203ENST00000562609 STK26Q9P289 416 aa17.91■□□□□ 0.46
GTF3C1-203ENST00000562609 ADAMTS8Q9UP79 889 aa17.91■□□□□ 0.46
GTF3C1-203ENST00000562609 KIAA1210Q9ULL0 1709 aa17.91■□□□□ 0.46
GTF3C1-203ENST00000562609 SYNMO15061 1565 aa17.91■□□□□ 0.46
GTF3C1-203ENST00000562609 ERBB4Q15303 1308 aa17.91■□□□□ 0.46
GTF3C1-203ENST00000562609 PIK3C2GO75747 1445 aa17.91■□□□□ 0.46
GTF3C1-203ENST00000562609 NEURL4Q96JN8 1562 aa17.9■□□□□ 0.46
GTF3C1-203ENST00000562609 NRXN1Q9ULB1 1477 aa17.9■□□□□ 0.46
GTF3C1-203ENST00000562609 USP19O94966 1318 aa17.9■□□□□ 0.46
GTF3C1-203ENST00000562609 DIP2BQ9P265 1576 aa17.9■□□□□ 0.46
GTF3C1-203ENST00000562609 SLC12A5Q9H2X9 1139 aa17.9■□□□□ 0.46
GTF3C1-203ENST00000562609 PPLO60437 1756 aa17.89■□□□□ 0.45
GTF3C1-203ENST00000562609 MYOM1P52179 1685 aa17.88■□□□□ 0.45
GTF3C1-203ENST00000562609 MYH16Q9H6N6 1097 aa17.88■□□□□ 0.45
GTF3C1-203ENST00000562609 ANTXR1Q9H6X2 564 aa17.88■□□□□ 0.45
GTF3C1-203ENST00000562609 VGFO15240 615 aaPredicted RBP17.88■□□□□ 0.45
GTF3C1-203ENST00000562609 TNNT2P45379 298 aaPredicted RBP17.88■□□□□ 0.45
GTF3C1-203ENST00000562609 MRE11P49959 708 aa17.87■□□□□ 0.45
GTF3C1-203ENST00000562609 GLI2P10070 1586 aa17.87■□□□□ 0.45
GTF3C1-203ENST00000562609 KDM5AP29375 1690 aaKnown RBP17.86■□□□□ 0.45
GTF3C1-203ENST00000562609 FGD1P98174 961 aa17.86■□□□□ 0.45
GTF3C1-203ENST00000562609 RPGRIP1LQ68CZ1 1315 aa17.85■□□□□ 0.45
GTF3C1-203ENST00000562609 STAG3Q9UJ98 1225 aa17.85■□□□□ 0.45
GTF3C1-203ENST00000562609 SEC24BO95487 1268 aa17.84■□□□□ 0.45
GTF3C1-203ENST00000562609 ASXL1Q8IXJ9 1541 aa17.84■□□□□ 0.45
GTF3C1-203ENST00000562609 WDR43Q15061 677 aaKnown RBP eCLIP17.84■□□□□ 0.45
GTF3C1-203ENST00000562609 SLC52A1Q9NWF4 448 aa17.84■□□□□ 0.45
GTF3C1-203ENST00000562609 ADGRB1O14514 1584 aa17.83■□□□□ 0.45
GTF3C1-203ENST00000562609 CCDC146Q8IYE0 955 aa17.83■□□□□ 0.45
GTF3C1-203ENST00000562609 MYO5BQ9ULV0 1848 aa17.83■□□□□ 0.44
GTF3C1-203ENST00000562609 MCM4P33991 863 aa17.83■□□□□ 0.44
GTF3C1-203ENST00000562609 TRIM44Q96DX7 344 aaPredicted RBP17.83■□□□□ 0.44
GTF3C1-203ENST00000562609 KIAA1211Q6ZU35 1233 aa17.82■□□□□ 0.44
GTF3C1-203ENST00000562609 GRPEL1Q9HAV7 217 aa17.82■□□□□ 0.44
GTF3C1-203ENST00000562609 CABP2Q9NPB3 220 aa17.82■□□□□ 0.44
GTF3C1-203ENST00000562609 NEXMIFQ5QGS0 1516 aa17.81■□□□□ 0.44
GTF3C1-203ENST00000562609 PIK3C2BO00750 1634 aa17.81■□□□□ 0.44
GTF3C1-203ENST00000562609 ARHGAP31Q2M1Z3 1444 aa17.81■□□□□ 0.44
GTF3C1-203ENST00000562609 TRAK2O60296 914 aa17.8■□□□□ 0.44
GTF3C1-203ENST00000562609 SETBP1Q9Y6X0 1596 aa17.79■□□□□ 0.44
GTF3C1-203ENST00000562609 SPRYD3Q8NCJ5 442 aa17.78■□□□□ 0.44
GTF3C1-203ENST00000562609 QRICH2Q9H0J4 1663 aa17.78■□□□□ 0.44
GTF3C1-203ENST00000562609 PREX1Q8TCU6 1659 aa17.78■□□□□ 0.44
GTF3C1-203ENST00000562609 NSD3Q9BZ95 1437 aa17.77■□□□□ 0.44
GTF3C1-203ENST00000562609 SBNO2Q9Y2G9 1366 aa17.77■□□□□ 0.44
GTF3C1-203ENST00000562609 BLMP54132 1417 aaPredicted RBP17.77■□□□□ 0.43
GTF3C1-203ENST00000562609 MINK1Q8N4C8 1332 aaPredicted RBP17.77■□□□□ 0.43
GTF3C1-203ENST00000562609 TBC1D2Q9BYX2 928 aa17.76■□□□□ 0.43
GTF3C1-203ENST00000562609 ZMYM4Q5VZL5 1548 aa17.76■□□□□ 0.43
GTF3C1-203ENST00000562609 ZC3H13Q5T200 1668 aaKnown RBP17.75■□□□□ 0.43
GTF3C1-203ENST00000562609 MYO3AQ8NEV4 1616 aa17.75■□□□□ 0.43
GTF3C1-203ENST00000562609 SRPK2P78362 688 aaKnown RBP17.75■□□□□ 0.43
GTF3C1-203ENST00000562609 MORC1Q86VD1 984 aa17.74■□□□□ 0.43
GTF3C1-203ENST00000562609 PRAM1Q96QH2 718 aa17.74■□□□□ 0.43
GTF3C1-203ENST00000562609 PLEKHH1Q9ULM0 1364 aa17.74■□□□□ 0.43
GTF3C1-203ENST00000562609 EVC2Q86UK5 1308 aa17.73■□□□□ 0.43
GTF3C1-203ENST00000562609 TMEM131LA2VDJ0 1609 aa17.73■□□□□ 0.43
GTF3C1-203ENST00000562609 APAF1O14727 1248 aa17.72■□□□□ 0.43
GTF3C1-203ENST00000562609 CLTCQ00610 1675 aaKnown RBP17.72■□□□□ 0.43
GTF3C1-203ENST00000562609 NPC1L1Q9UHC9 1359 aa17.72■□□□□ 0.43
GTF3C1-203ENST00000562609 RIPK4P57078 832 aa17.72■□□□□ 0.43
GTF3C1-203ENST00000562609 PDE4CQ08493 712 aa17.72■□□□□ 0.43
GTF3C1-203ENST00000562609 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.72■□□□□ 0.43
GTF3C1-203ENST00000562609 PLPPR3Q6T4P5 718 aa17.71■□□□□ 0.43
GTF3C1-203ENST00000562609 FAM13BQ9NYF5 915 aa17.71■□□□□ 0.43
GTF3C1-203ENST00000562609 ESF1Q9H501 851 aaKnown RBP17.71■□□□□ 0.43
GTF3C1-203ENST00000562609 ARHGEF28Q8N1W1 1705 aaKnown RBP17.7■□□□□ 0.42
GTF3C1-203ENST00000562609 NLRP1Q9C000 1473 aa17.7■□□□□ 0.42
GTF3C1-203ENST00000562609 TULP4Q9NRJ4 1543 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms