RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 CCER2I3L3R5 266 aa19.62■□□□□ 0.73
COMMD4-205ENST00000562310 NPHP4O75161 1426 aaPredicted RBP19.61■□□□□ 0.73
COMMD4-205ENST00000562310 NINLQ9Y2I6 1382 aa19.61■□□□□ 0.73
COMMD4-205ENST00000562310 CHD2O14647 1828 aaKnown RBP19.6■□□□□ 0.73
COMMD4-205ENST00000562310 ATAD2Q6PL18 1390 aa19.59■□□□□ 0.73
COMMD4-205ENST00000562310 SLC26A8Q96RN1 970 aa19.59■□□□□ 0.73
COMMD4-205ENST00000562310 PTPRUQ92729 1446 aa19.59■□□□□ 0.73
COMMD4-205ENST00000562310 PRKRIP1Q9H875 184 aaPredicted RBP19.58■□□□□ 0.72
COMMD4-205ENST00000562310 ROBO2Q9HCK4 1378 aa19.57■□□□□ 0.72
COMMD4-205ENST00000562310 PLEKHH1Q9ULM0 1364 aa19.57■□□□□ 0.72
COMMD4-205ENST00000562310 MINK1Q8N4C8 1332 aaPredicted RBP19.56■□□□□ 0.72
COMMD4-205ENST00000562310 USP32Q8NFA0 1604 aa19.56■□□□□ 0.72
COMMD4-205ENST00000562310 SAFB2Q14151 953 aaKnown RBP eCLIP19.56■□□□□ 0.72
COMMD4-205ENST00000562310 PANK3Q9H999 370 aa19.56■□□□□ 0.72
COMMD4-205ENST00000562310 NWD1Q149M9 1564 aa19.54■□□□□ 0.72
COMMD4-205ENST00000562310 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.54■□□□□ 0.72
COMMD4-205ENST00000562310 PER1O15534 1290 aaPredicted RBP19.53■□□□□ 0.72
COMMD4-205ENST00000562310 WAPLQ7Z5K2 1190 aa19.53■□□□□ 0.72
COMMD4-205ENST00000562310 AMOTL2Q9Y2J4 779 aa19.53■□□□□ 0.72
COMMD4-205ENST00000562310 NPC1L1Q9UHC9 1359 aa19.53■□□□□ 0.72
COMMD4-205ENST00000562310 SRPK2P78362 688 aaKnown RBP19.52■□□□□ 0.72
COMMD4-205ENST00000562310 LMTK3Q96Q04 1460 aa19.52■□□□□ 0.72
COMMD4-205ENST00000562310 RALBP1Q15311 655 aa19.51■□□□□ 0.71
COMMD4-205ENST00000562310 KNSTRNQ9Y448 316 aa19.51■□□□□ 0.71
COMMD4-205ENST00000562310 ANKRD36BQ8N2N9 1353 aa19.5■□□□□ 0.71
COMMD4-205ENST00000562310 PARD3Q8TEW0 1356 aa19.5■□□□□ 0.71
COMMD4-205ENST00000562310 CDK19Q9BWU1 502 aa19.49■□□□□ 0.71
COMMD4-205ENST00000562310 CABP2Q9NPB3 220 aa19.49■□□□□ 0.71
COMMD4-205ENST00000562310 ATP7BP35670 1465 aa19.48■□□□□ 0.71
COMMD4-205ENST00000562310 WASLO00401 505 aaPredicted RBP19.48■□□□□ 0.71
COMMD4-205ENST00000562310 TOPAZ1Q8N9V7 1692 aa19.48■□□□□ 0.71
COMMD4-205ENST00000562310 ITSN1Q15811 1721 aa19.48■□□□□ 0.71
COMMD4-205ENST00000562310 TMC1Q8TDI8 760 aa19.47■□□□□ 0.71
COMMD4-205ENST00000562310 NCKAP5LQ9HCH0 1330 aa19.47■□□□□ 0.71
COMMD4-205ENST00000562310 NKTRP30414 1462 aaKnown RBP19.46■□□□□ 0.71
COMMD4-205ENST00000562310 MYBBP1AQ9BQG0 1328 aaKnown RBP19.45■□□□□ 0.7
COMMD4-205ENST00000562310 CDC42BPGQ6DT37 1551 aa19.44■□□□□ 0.7
COMMD4-205ENST00000562310 NSD3Q9BZ95 1437 aa19.44■□□□□ 0.7
COMMD4-205ENST00000562310 SLC12A5Q9H2X9 1139 aa19.44■□□□□ 0.7
COMMD4-205ENST00000562310 TERF2IPQ9NYB0 399 aa19.44■□□□□ 0.7
COMMD4-205ENST00000562310 NALCNQ8IZF0 1738 aa19.44■□□□□ 0.7
COMMD4-205ENST00000562310 FMN2Q9NZ56 1722 aa19.43■□□□□ 0.7
COMMD4-205ENST00000562310 KCNA6P17658 529 aa19.43■□□□□ 0.7
COMMD4-205ENST00000562310 AMER1Q5JTC6 1135 aaPredicted RBP19.43■□□□□ 0.7
COMMD4-205ENST00000562310 NSD2O96028 1365 aa19.43■□□□□ 0.7
COMMD4-205ENST00000562310 AKAP12Q02952 1782 aa19.42■□□□□ 0.7
COMMD4-205ENST00000562310 ANKRD26Q9UPS8 1709 aa19.42■□□□□ 0.7
COMMD4-205ENST00000562310 STRCQ7RTU9 1775 aa19.42■□□□□ 0.7
COMMD4-205ENST00000562310 CD163L1Q9NR16 1453 aa19.41■□□□□ 0.7
COMMD4-205ENST00000562310 MON2Q7Z3U7 1717 aa19.41■□□□□ 0.7
COMMD4-205ENST00000562310 KIF20BQ96Q89 1820 aa19.41■□□□□ 0.7
COMMD4-205ENST00000562310 A0A1W2PP64 1363 aa19.41■□□□□ 0.7
COMMD4-205ENST00000562310 BRD4O60885 1362 aaPredicted RBP19.41■□□□□ 0.7
COMMD4-205ENST00000562310 HDGFL2Q7Z4V5 671 aaPredicted RBP19.4■□□□□ 0.7
COMMD4-205ENST00000562310 CARD14Q9BXL6 1004 aa19.4■□□□□ 0.7
COMMD4-205ENST00000562310 PPIP5K1Q6PFW1 1433 aa19.4■□□□□ 0.7
COMMD4-205ENST00000562310 ANKARQ7Z5J8 1434 aa19.4■□□□□ 0.7
COMMD4-205ENST00000562310 CC2D1BQ5T0F9 858 aaKnown RBP19.39■□□□□ 0.69
COMMD4-205ENST00000562310 CGNL1Q0VF96 1302 aa19.39■□□□□ 0.69
COMMD4-205ENST00000562310 ADGRL3Q9HAR2 1447 aa19.39■□□□□ 0.69
COMMD4-205ENST00000562310 NLRP13Q86W25 1043 aa19.38■□□□□ 0.69
COMMD4-205ENST00000562310 NUDT16Q96DE0 195 aaKnown RBP19.38■□□□□ 0.69
COMMD4-205ENST00000562310 MRS2Q9HD23 443 aa19.38■□□□□ 0.69
COMMD4-205ENST00000562310 CCDC61Q9Y6R9 512 aa19.37■□□□□ 0.69
COMMD4-205ENST00000562310 HSPA2P54652 639 aa19.36■□□□□ 0.69
COMMD4-205ENST00000562310 CPSF1Q10570 1443 aaKnown RBP19.35■□□□□ 0.69
COMMD4-205ENST00000562310 CNGB1Q14028 1251 aaPredicted RBP19.35■□□□□ 0.69
COMMD4-205ENST00000562310 CABP1Q9NZU7 370 aa19.35■□□□□ 0.69
COMMD4-205ENST00000562310 EDC4Q6P2E9 1401 aaKnown RBP19.34■□□□□ 0.69
COMMD4-205ENST00000562310 PRR36Q9H6K5 1346 aa19.33■□□□□ 0.69
COMMD4-205ENST00000562310 ILDR2Q71H61 639 aa19.33■□□□□ 0.68
COMMD4-205ENST00000562310 YTHDC1Q96MU7 727 aaKnown RBP19.33■□□□□ 0.68
COMMD4-205ENST00000562310 STRCP1A6NGW2 1772 aa19.33■□□□□ 0.68
COMMD4-205ENST00000562310 NCOA3Q9Y6Q9 1424 aa19.33■□□□□ 0.68
COMMD4-205ENST00000562310 NRKQ7Z2Y5 1582 aa19.32■□□□□ 0.68
COMMD4-205ENST00000562310 RGPD8O14715 1765 aaPredicted RBP19.32■□□□□ 0.68
COMMD4-205ENST00000562310 CENPBP07199 599 aaPredicted RBP19.32■□□□□ 0.68
COMMD4-205ENST00000562310 PLEKHG3A1L390 1219 aa19.3■□□□□ 0.68
COMMD4-205ENST00000562310 SOCS7O14512 581 aa19.29■□□□□ 0.68
COMMD4-205ENST00000562310 CCDC184Q52MB2 194 aa19.29■□□□□ 0.68
COMMD4-205ENST00000562310 ZNF692Q9BU19 519 aaPredicted RBP19.29■□□□□ 0.68
COMMD4-205ENST00000562310 PPP2R1AP30153 589 aa19.28■□□□□ 0.68
COMMD4-205ENST00000562310 DCCP43146 1447 aa19.27■□□□□ 0.68
COMMD4-205ENST00000562310 MORC1Q86VD1 984 aa19.27■□□□□ 0.68
COMMD4-205ENST00000562310 PROSER2Q86WR7 435 aaPredicted RBP19.27■□□□□ 0.68
COMMD4-205ENST00000562310 POLR3AO14802 1390 aaPredicted RBP19.26■□□□□ 0.67
COMMD4-205ENST00000562310 USP6P35125 1406 aa19.25■□□□□ 0.67
COMMD4-205ENST00000562310 INSRP06213 1382 aa19.24■□□□□ 0.67
COMMD4-205ENST00000562310 C14orf37Q86TY3 774 aa19.24■□□□□ 0.67
COMMD4-205ENST00000562310 DMRT2Q9Y5R5 561 aa19.24■□□□□ 0.67
COMMD4-205ENST00000562310 KIF1AQ12756 1690 aa19.24■□□□□ 0.67
COMMD4-205ENST00000562310 ACEP12821 1306 aa19.23■□□□□ 0.67
COMMD4-205ENST00000562310 PNISRQ8TF01 805 aaKnown RBP19.22■□□□□ 0.67
COMMD4-205ENST00000562310 TMEM94Q12767 1356 aa19.21■□□□□ 0.67
COMMD4-205ENST00000562310 XIRP1Q702N8 1843 aaKnown RBP19.21■□□□□ 0.67
COMMD4-205ENST00000562310 FYB1O15117 783 aa19.21■□□□□ 0.67
COMMD4-205ENST00000562310 FAM9BQ8IZU0 186 aa19.21■□□□□ 0.67
COMMD4-205ENST00000562310 NUTM2FA1L443 756 aa19.2■□□□□ 0.66
COMMD4-205ENST00000562310 C19orf44Q9H6X5 657 aa19.2■□□□□ 0.66
COMMD4-205ENST00000562310 USP54Q70EL1 1684 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms