RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 STK26Q9P289 416 aa23.58■■□□□ 1.36
LMX1B-204ENST00000561065 ADGRB1O14514 1584 aa23.56■■□□□ 1.36
LMX1B-204ENST00000561065 WAPLQ7Z5K2 1190 aa23.56■■□□□ 1.36
LMX1B-204ENST00000561065 HRCP23327 699 aa23.55■■□□□ 1.36
LMX1B-204ENST00000561065 ORAI2Q96SN7 254 aa23.55■■□□□ 1.36
LMX1B-204ENST00000561065 PNPLA6Q8IY17 1366 aa23.54■■□□□ 1.36
LMX1B-204ENST00000561065 C14orf93Q9H972 538 aaKnown RBP23.54■■□□□ 1.36
LMX1B-204ENST00000561065 CFAP70Q5T0N1 1121 aa23.53■■□□□ 1.36
LMX1B-204ENST00000561065 RGPD8O14715 1765 aaPredicted RBP23.49■■□□□ 1.35
LMX1B-204ENST00000561065 DLC1Q96QB1 1528 aa23.49■■□□□ 1.35
LMX1B-204ENST00000561065 SOS2Q07890 1332 aaPredicted RBP23.48■■□□□ 1.35
LMX1B-204ENST00000561065 PXDNQ92626 1479 aa23.48■■□□□ 1.35
LMX1B-204ENST00000561065 COL22A1Q8NFW1 1626 aaPredicted RBP23.48■■□□□ 1.35
LMX1B-204ENST00000561065 DHX57Q6P158 1386 aaKnown RBP23.48■■□□□ 1.35
LMX1B-204ENST00000561065 LRRC59Q96AG4 307 aaKnown RBP23.47■■□□□ 1.35
LMX1B-204ENST00000561065 KIF1AQ12756 1690 aa23.46■■□□□ 1.35
LMX1B-204ENST00000561065 NUTM2BA6NNL0 878 aaPredicted RBP23.46■■□□□ 1.35
LMX1B-204ENST00000561065 NUTM2EB1AL46 878 aaPredicted RBP23.46■■□□□ 1.35
LMX1B-204ENST00000561065 NUTM2AQ8IVF1 878 aaPredicted RBP23.46■■□□□ 1.35
LMX1B-204ENST00000561065 MEX3CQ5U5Q3 659 aaKnown RBP23.45■■□□□ 1.34
LMX1B-204ENST00000561065 ADGRB2O60241 1585 aa23.45■■□□□ 1.34
LMX1B-204ENST00000561065 USP32Q8NFA0 1604 aa23.44■■□□□ 1.34
LMX1B-204ENST00000561065 NUTM2FA1L443 756 aa23.43■■□□□ 1.34
LMX1B-204ENST00000561065 SIRT1Q96EB6 747 aa23.42■■□□□ 1.34
LMX1B-204ENST00000561065 ARHGEF28Q8N1W1 1705 aaKnown RBP23.42■■□□□ 1.34
LMX1B-204ENST00000561065 ESCO1Q5FWF5 840 aa23.41■■□□□ 1.34
LMX1B-204ENST00000561065 DCAF11Q8TEB1 546 aa23.4■■□□□ 1.34
LMX1B-204ENST00000561065 KDM2AQ9Y2K7 1162 aa23.4■■□□□ 1.34
LMX1B-204ENST00000561065 PRAM1Q96QH2 718 aa23.39■■□□□ 1.34
LMX1B-204ENST00000561065 NPHP3Q7Z494 1330 aa23.39■■□□□ 1.33
LMX1B-204ENST00000561065 MARF1Q9Y4F3 1742 aaKnown RBP23.38■■□□□ 1.33
LMX1B-204ENST00000561065 XPCQ01831 940 aaPredicted RBP23.37■■□□□ 1.33
LMX1B-204ENST00000561065 SAFB2Q14151 953 aaKnown RBP eCLIP23.37■■□□□ 1.33
LMX1B-204ENST00000561065 AFF2P51816 1311 aa23.37■■□□□ 1.33
LMX1B-204ENST00000561065 KIAA1210Q9ULL0 1709 aa23.36■■□□□ 1.33
LMX1B-204ENST00000561065 FOXO3O43524 673 aa23.35■■□□□ 1.33
LMX1B-204ENST00000561065 ZNF772Q68DY9 489 aaPredicted RBP23.35■■□□□ 1.33
LMX1B-204ENST00000561065 C8orf37Q96NL8 207 aa23.33■■□□□ 1.33
LMX1B-204ENST00000561065 TRAK1Q9UPV9 953 aa23.33■■□□□ 1.32
LMX1B-204ENST00000561065 ABCA3Q99758 1704 aa23.31■■□□□ 1.32
LMX1B-204ENST00000561065 ADAMTS2O95450 1211 aa23.31■■□□□ 1.32
LMX1B-204ENST00000561065 ANKARQ7Z5J8 1434 aa23.3■■□□□ 1.32
LMX1B-204ENST00000561065 STAC3Q96MF2 364 aa23.3■■□□□ 1.32
LMX1B-204ENST00000561065 TULP4Q9NRJ4 1543 aa23.29■■□□□ 1.32
LMX1B-204ENST00000561065 POGKQ9P215 609 aa23.29■■□□□ 1.32
LMX1B-204ENST00000561065 TRPM3Q9HCF6 1732 aaPredicted RBP23.29■■□□□ 1.32
LMX1B-204ENST00000561065 CDK12Q9NYV4 1490 aaPredicted RBP23.28■■□□□ 1.32
LMX1B-204ENST00000561065 HIRIP3Q9BW71 556 aaPredicted RBP23.27■■□□□ 1.32
LMX1B-204ENST00000561065 SPATA31A3Q5VYP0 1347 aa23.26■■□□□ 1.31
LMX1B-204ENST00000561065 MINK1Q8N4C8 1332 aaPredicted RBP23.26■■□□□ 1.31
LMX1B-204ENST00000561065 PRR36Q9H6K5 1346 aa23.26■■□□□ 1.31
LMX1B-204ENST00000561065 PHF8Q9UPP1 1060 aa23.26■■□□□ 1.31
LMX1B-204ENST00000561065 RGS12O14924 1447 aa23.25■■□□□ 1.31
LMX1B-204ENST00000561065 TNS3Q68CZ2 1445 aa23.25■■□□□ 1.31
LMX1B-204ENST00000561065 ITSN1Q15811 1721 aa23.24■■□□□ 1.31
LMX1B-204ENST00000561065 ATP7BP35670 1465 aa23.23■■□□□ 1.31
LMX1B-204ENST00000561065 RXRBP28702 533 aa23.23■■□□□ 1.31
LMX1B-204ENST00000561065 TOPAZ1Q8N9V7 1692 aa23.23■■□□□ 1.31
LMX1B-204ENST00000561065 ALS2Q96Q42 1657 aa23.23■■□□□ 1.31
LMX1B-204ENST00000561065 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.22■■□□□ 1.31
LMX1B-204ENST00000561065 KRT28Q7Z3Y7 464 aa23.22■■□□□ 1.31
LMX1B-204ENST00000561065 NGLY1Q96IV0 654 aa23.22■■□□□ 1.31
LMX1B-204ENST00000561065 ATRNO75882 1429 aa23.19■■□□□ 1.3
LMX1B-204ENST00000561065 CRYBG1Q9Y4K1 1723 aa23.19■■□□□ 1.3
LMX1B-204ENST00000561065 FNBP4Q8N3X1 1017 aaPredicted RBP23.19■■□□□ 1.3
LMX1B-204ENST00000561065 PMFBP1Q8TBY8 1022 aa23.19■■□□□ 1.3
LMX1B-204ENST00000561065 QTRT2Q9H974 415 aaKnown RBP23.19■■□□□ 1.3
LMX1B-204ENST00000561065 SBNO1A3KN83 1393 aa23.19■■□□□ 1.3
LMX1B-204ENST00000561065 BCL9LQ86UU0 1499 aa23.19■■□□□ 1.3
LMX1B-204ENST00000561065 TRPM1Q7Z4N2 1603 aa23.19■■□□□ 1.3
LMX1B-204ENST00000561065 PLCH1Q4KWH8 1693 aa23.18■■□□□ 1.3
LMX1B-204ENST00000561065 EIF3AQ14152 1382 aaKnown RBP23.18■■□□□ 1.3
LMX1B-204ENST00000561065 WASLO00401 505 aaPredicted RBP23.18■■□□□ 1.3
LMX1B-204ENST00000561065 NBPF1Q3BBV0 1214 aa23.18■■□□□ 1.3
LMX1B-204ENST00000561065 USP21Q9UK80 565 aa23.17■■□□□ 1.3
LMX1B-204ENST00000561065 RBM6P78332 1123 aaKnown RBP23.16■■□□□ 1.3
LMX1B-204ENST00000561065 QRICH2Q9H0J4 1663 aa23.16■■□□□ 1.3
LMX1B-204ENST00000561065 SLIT2O94813 1529 aa23.15■■□□□ 1.3
LMX1B-204ENST00000561065 SIN3AQ96ST3 1273 aa23.15■■□□□ 1.3
LMX1B-204ENST00000561065 L3MBTL2Q969R5 705 aa23.13■■□□□ 1.29
LMX1B-204ENST00000561065 CABLES1Q8TDN4 633 aa23.12■■□□□ 1.29
LMX1B-204ENST00000561065 GLI3P10071 1580 aa23.12■■□□□ 1.29
LMX1B-204ENST00000561065 ARHGEF10O15013 1369 aa23.12■■□□□ 1.29
LMX1B-204ENST00000561065 NWD2Q9ULI1 1742 aa23.12■■□□□ 1.29
LMX1B-204ENST00000561065 PSME1Q06323 249 aa23.11■■□□□ 1.29
LMX1B-204ENST00000561065 TRPC5Q9UL62 973 aaPredicted RBP23.11■■□□□ 1.29
LMX1B-204ENST00000561065 UPF1Q92900 1129 aaKnown RBP eCLIP23.1■■□□□ 1.29
LMX1B-204ENST00000561065 NRAPQ86VF7 1730 aa23.09■■□□□ 1.29
LMX1B-204ENST00000561065 PLEKHG5O94827 1062 aa23.08■■□□□ 1.28
LMX1B-204ENST00000561065 EP400Q96L91 3159 aa23.07■■□□□ 1.28
LMX1B-204ENST00000561065 PHRF1Q9P1Y6 1649 aaKnown RBP23.07■■□□□ 1.28
LMX1B-204ENST00000561065 GPRASP1Q5JY77 1395 aa23.07■■□□□ 1.28
LMX1B-204ENST00000561065 LMOD2Q6P5Q4 547 aa23.07■■□□□ 1.28
LMX1B-204ENST00000561065 NUDT16Q96DE0 195 aaKnown RBP23.07■■□□□ 1.28
LMX1B-204ENST00000561065 CDK19Q9BWU1 502 aa23.06■■□□□ 1.28
LMX1B-204ENST00000561065 RALGAPBQ86X10 1494 aa23.05■■□□□ 1.28
LMX1B-204ENST00000561065 NEUROD1Q13562 356 aa23.04■■□□□ 1.28
LMX1B-204ENST00000561065 POLR3AO14802 1390 aaPredicted RBP23.03■■□□□ 1.28
LMX1B-204ENST00000561065 CENPJQ9HC77 1338 aaPredicted RBP23.03■■□□□ 1.28
LMX1B-204ENST00000561065 NGDNQ8NEJ9 315 aaKnown RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms