RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 TNNT2P45379 298 aaPredicted RBP14.72□□□□□ -0.05
SNRPA1-211ENST00000560433 NLRP13Q86W25 1043 aa14.72□□□□□ -0.05
SNRPA1-211ENST00000560433 EID1Q9Y6B2 187 aa14.72□□□□□ -0.05
SNRPA1-211ENST00000560433 CDK19Q9BWU1 502 aa14.71□□□□□ -0.05
SNRPA1-211ENST00000560433 SALL2Q9Y467 1007 aaPredicted RBP14.7□□□□□ -0.06
SNRPA1-211ENST00000560433 NSD3Q9BZ95 1437 aa14.7□□□□□ -0.06
SNRPA1-211ENST00000560433 THEMISQ8N1K5 641 aaPredicted RBP14.7□□□□□ -0.06
SNRPA1-211ENST00000560433 BRD4O60885 1362 aaPredicted RBP14.69□□□□□ -0.06
SNRPA1-211ENST00000560433 LRPPRCP42704 1394 aaKnown RBP14.69□□□□□ -0.06
SNRPA1-211ENST00000560433 PPP2R1AP30153 589 aa14.69□□□□□ -0.06
SNRPA1-211ENST00000560433 ADAMTS13Q76LX8 1427 aa14.69□□□□□ -0.06
SNRPA1-211ENST00000560433 NCKAP5LQ9HCH0 1330 aa14.68□□□□□ -0.06
SNRPA1-211ENST00000560433 NUTM2FA1L443 756 aa14.68□□□□□ -0.06
SNRPA1-211ENST00000560433 ABCC11Q96J66 1382 aa14.67□□□□□ -0.06
SNRPA1-211ENST00000560433 CABP1Q9NZU7 370 aa14.67□□□□□ -0.06
SNRPA1-211ENST00000560433 PLEKHG1Q9ULL1 1385 aa14.66□□□□□ -0.06
SNRPA1-211ENST00000560433 ROBO2Q9HCK4 1378 aa14.65□□□□□ -0.06
SNRPA1-211ENST00000560433 A0A1W2PP64 1363 aa14.65□□□□□ -0.06
SNRPA1-211ENST00000560433 ADAMTSL3P82987 1691 aa14.64□□□□□ -0.07
SNRPA1-211ENST00000560433 PTPRUQ92729 1446 aa14.64□□□□□ -0.07
SNRPA1-211ENST00000560433 AMOTL2Q9Y2J4 779 aa14.63□□□□□ -0.07
SNRPA1-211ENST00000560433 CEP170BQ9Y4F5 1589 aaPredicted RBP14.63□□□□□ -0.07
SNRPA1-211ENST00000560433 MORC1Q86VD1 984 aa14.63□□□□□ -0.07
SNRPA1-211ENST00000560433 WASLO00401 505 aaPredicted RBP14.62□□□□□ -0.07
SNRPA1-211ENST00000560433 RBM33Q96EV2 1170 aaKnown RBP14.62□□□□□ -0.07
SNRPA1-211ENST00000560433 GGNBP2Q9H3C7 697 aa14.62□□□□□ -0.07
SNRPA1-211ENST00000560433 ANKRD36BQ8N2N9 1353 aa14.62□□□□□ -0.07
SNRPA1-211ENST00000560433 ARHGAP23Q9P227 1491 aa14.62□□□□□ -0.07
SNRPA1-211ENST00000560433 SLIT1O75093 1534 aa14.62□□□□□ -0.07
SNRPA1-211ENST00000560433 DLC1Q96QB1 1528 aa14.61□□□□□ -0.07
SNRPA1-211ENST00000560433 ZBED9Q6R2W3 1325 aa14.61□□□□□ -0.07
SNRPA1-211ENST00000560433 ADAMTS8Q9UP79 889 aa14.61□□□□□ -0.07
SNRPA1-211ENST00000560433 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.61□□□□□ -0.07
SNRPA1-211ENST00000560433 ATAD2Q6PL18 1390 aa14.6□□□□□ -0.07
SNRPA1-211ENST00000560433 PUS7Q96PZ0 661 aaKnown RBP14.6□□□□□ -0.07
SNRPA1-211ENST00000560433 CGNL1Q0VF96 1302 aa14.6□□□□□ -0.07
SNRPA1-211ENST00000560433 CD163L1Q9NR16 1453 aa14.59□□□□□ -0.07
SNRPA1-211ENST00000560433 NPC1L1Q9UHC9 1359 aa14.59□□□□□ -0.07
SNRPA1-211ENST00000560433 FBLN1P23142 703 aa14.58□□□□□ -0.07
SNRPA1-211ENST00000560433 SUPT16HQ9Y5B9 1047 aaKnown RBP14.58□□□□□ -0.07
SNRPA1-211ENST00000560433 MED14O60244 1454 aa14.58□□□□□ -0.08
SNRPA1-211ENST00000560433 ANKLE2Q86XL3 938 aa14.58□□□□□ -0.08
SNRPA1-211ENST00000560433 NUDT16Q96DE0 195 aaKnown RBP14.58□□□□□ -0.08
SNRPA1-211ENST00000560433 TERF2IPQ9NYB0 399 aa14.58□□□□□ -0.08
SNRPA1-211ENST00000560433 TBX22Q9Y458 520 aa14.58□□□□□ -0.08
SNRPA1-211ENST00000560433 KCNA6P17658 529 aa14.57□□□□□ -0.08
SNRPA1-211ENST00000560433 TECPR2O15040 1411 aa14.57□□□□□ -0.08
SNRPA1-211ENST00000560433 PRR36Q9H6K5 1346 aa14.57□□□□□ -0.08
SNRPA1-211ENST00000560433 FYB1O15117 783 aa14.56□□□□□ -0.08
SNRPA1-211ENST00000560433 IRX6P78412 446 aaPredicted RBP14.56□□□□□ -0.08
SNRPA1-211ENST00000560433 WDR43Q15061 677 aaKnown RBP eCLIP14.56□□□□□ -0.08
SNRPA1-211ENST00000560433 HDGFL2Q7Z4V5 671 aaPredicted RBP14.56□□□□□ -0.08
SNRPA1-211ENST00000560433 CCDC146Q8IYE0 955 aa14.56□□□□□ -0.08
SNRPA1-211ENST00000560433 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.56□□□□□ -0.08
SNRPA1-211ENST00000560433 FAM135BQ49AJ0 1406 aa14.56□□□□□ -0.08
SNRPA1-211ENST00000560433 CPS1P31327 1500 aa14.56□□□□□ -0.08
SNRPA1-211ENST00000560433 PPIP5K1Q6PFW1 1433 aa14.56□□□□□ -0.08
SNRPA1-211ENST00000560433 FKBP8Q14318 412 aa14.55□□□□□ -0.08
SNRPA1-211ENST00000560433 KNDC1Q76NI1 1749 aa14.55□□□□□ -0.08
SNRPA1-211ENST00000560433 MTHFSP49914 203 aa14.55□□□□□ -0.08
SNRPA1-211ENST00000560433 SETD1BQ9UPS6 1966 aaKnown RBP14.55□□□□□ -0.08
SNRPA1-211ENST00000560433 KDM4FA0A1W2PPD8 638 aa14.54□□□□□ -0.08
SNRPA1-211ENST00000560433 SIRT1Q96EB6 747 aa14.54□□□□□ -0.08
SNRPA1-211ENST00000560433 ZRANB1Q9UGI0 708 aa14.54□□□□□ -0.08
SNRPA1-211ENST00000560433 CCDC61Q9Y6R9 512 aa14.53□□□□□ -0.08
SNRPA1-211ENST00000560433 NINLQ9Y2I6 1382 aa14.53□□□□□ -0.08
SNRPA1-211ENST00000560433 PMFBP1Q8TBY8 1022 aa14.52□□□□□ -0.08
SNRPA1-211ENST00000560433 CDCA7LQ96GN5 454 aa14.51□□□□□ -0.09
SNRPA1-211ENST00000560433 NME9Q86XW9 330 aa14.51□□□□□ -0.09
SNRPA1-211ENST00000560433 PPM1GO15355 546 aaPredicted RBP14.5□□□□□ -0.09
SNRPA1-211ENST00000560433 HSPA2P54652 639 aa14.5□□□□□ -0.09
SNRPA1-211ENST00000560433 ATP7BP35670 1465 aa14.49□□□□□ -0.09
SNRPA1-211ENST00000560433 ZNF142P52746 1687 aaPredicted RBP14.49□□□□□ -0.09
SNRPA1-211ENST00000560433 USP32Q8NFA0 1604 aa14.48□□□□□ -0.09
SNRPA1-211ENST00000560433 BLMP54132 1417 aaPredicted RBP14.48□□□□□ -0.09
SNRPA1-211ENST00000560433 ACEP12821 1306 aa14.47□□□□□ -0.09
SNRPA1-211ENST00000560433 APAF1O14727 1248 aa14.47□□□□□ -0.09
SNRPA1-211ENST00000560433 CPSF1Q10570 1443 aaKnown RBP14.47□□□□□ -0.09
SNRPA1-211ENST00000560433 POLR3AO14802 1390 aaPredicted RBP14.46□□□□□ -0.09
SNRPA1-211ENST00000560433 NSD2O96028 1365 aa14.46□□□□□ -0.09
SNRPA1-211ENST00000560433 NEFLP07196 543 aa14.46□□□□□ -0.09
SNRPA1-211ENST00000560433 NEUROD2Q15784 382 aa14.46□□□□□ -0.09
SNRPA1-211ENST00000560433 AEBP2Q6ZN18 517 aaPredicted RBP14.46□□□□□ -0.09
SNRPA1-211ENST00000560433 NUDCQ9Y266 331 aa14.46□□□□□ -0.09
SNRPA1-211ENST00000560433 RGPD8O14715 1765 aaPredicted RBP14.45□□□□□ -0.1
SNRPA1-211ENST00000560433 PTCH1Q13635 1447 aa14.45□□□□□ -0.1
SNRPA1-211ENST00000560433 DIP2AQ14689 1571 aa14.45□□□□□ -0.1
SNRPA1-211ENST00000560433 SOX12O15370 315 aa14.45□□□□□ -0.1
SNRPA1-211ENST00000560433 NKTRP30414 1462 aaKnown RBP14.45□□□□□ -0.1
SNRPA1-211ENST00000560433 NPHP4O75161 1426 aaPredicted RBP14.45□□□□□ -0.1
SNRPA1-211ENST00000560433 XRN1Q8IZH2 1706 aaKnown RBP14.44□□□□□ -0.1
SNRPA1-211ENST00000560433 RRP7AQ9Y3A4 280 aaKnown RBP14.44□□□□□ -0.1
SNRPA1-211ENST00000560433 U2SURPO15042 1029 aaKnown RBP14.44□□□□□ -0.1
SNRPA1-211ENST00000560433 C14orf37Q86TY3 774 aa14.43□□□□□ -0.1
SNRPA1-211ENST00000560433 CDC42BPGQ6DT37 1551 aa14.43□□□□□ -0.1
SNRPA1-211ENST00000560433 KIF20BQ96Q89 1820 aa14.43□□□□□ -0.1
SNRPA1-211ENST00000560433 U2AF1L5P0DN76 240 aaPredicted RBP14.43□□□□□ -0.1
SNRPA1-211ENST00000560433 U2AF1Q01081 240 aaKnown RBP eCLIP14.43□□□□□ -0.1
SNRPA1-211ENST00000560433 RRS1Q15050 365 aaKnown RBP14.43□□□□□ -0.1
SNRPA1-211ENST00000560433 CFAP53Q96M91 514 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms