RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 TBX22Q9Y458 520 aa19.76■□□□□ 0.75
ZEB1-218ENST00000560196 NINLQ9Y2I6 1382 aa19.75■□□□□ 0.75
ZEB1-218ENST00000560196 BCANQ96GW7 911 aa19.73■□□□□ 0.75
ZEB1-218ENST00000560196 KNSTRNQ9Y448 316 aa19.73■□□□□ 0.75
ZEB1-218ENST00000560196 MYBBP1AQ9BQG0 1328 aaKnown RBP19.73■□□□□ 0.75
ZEB1-218ENST00000560196 ATAD2Q6PL18 1390 aa19.72■□□□□ 0.75
ZEB1-218ENST00000560196 AMER1Q5JTC6 1135 aaPredicted RBP19.7■□□□□ 0.74
ZEB1-218ENST00000560196 BRD4O60885 1362 aaPredicted RBP19.7■□□□□ 0.74
ZEB1-218ENST00000560196 PIK3R4Q99570 1358 aa19.7■□□□□ 0.74
ZEB1-218ENST00000560196 MRS2Q9HD23 443 aa19.69■□□□□ 0.74
ZEB1-218ENST00000560196 MINK1Q8N4C8 1332 aaPredicted RBP19.69■□□□□ 0.74
ZEB1-218ENST00000560196 PLEKHH1Q9ULM0 1364 aa19.69■□□□□ 0.74
ZEB1-218ENST00000560196 SAFB2Q14151 953 aaKnown RBP eCLIP19.68■□□□□ 0.74
ZEB1-218ENST00000560196 ANKLE2Q86XL3 938 aa19.68■□□□□ 0.74
ZEB1-218ENST00000560196 CCDC184Q52MB2 194 aa19.67■□□□□ 0.74
ZEB1-218ENST00000560196 WAPLQ7Z5K2 1190 aa19.67■□□□□ 0.74
ZEB1-218ENST00000560196 PTPRUQ92729 1446 aa19.67■□□□□ 0.74
ZEB1-218ENST00000560196 NLRP13Q86W25 1043 aa19.66■□□□□ 0.74
ZEB1-218ENST00000560196 CARD14Q9BXL6 1004 aa19.66■□□□□ 0.74
ZEB1-218ENST00000560196 ANKRD36BQ8N2N9 1353 aa19.66■□□□□ 0.74
ZEB1-218ENST00000560196 PTCH1Q13635 1447 aa19.66■□□□□ 0.74
ZEB1-218ENST00000560196 USP32Q8NFA0 1604 aa19.65■□□□□ 0.74
ZEB1-218ENST00000560196 SLC26A8Q96RN1 970 aa19.65■□□□□ 0.74
ZEB1-218ENST00000560196 CDK19Q9BWU1 502 aa19.65■□□□□ 0.74
ZEB1-218ENST00000560196 SLC12A5Q9H2X9 1139 aa19.65■□□□□ 0.74
ZEB1-218ENST00000560196 CABP2Q9NPB3 220 aa19.65■□□□□ 0.74
ZEB1-218ENST00000560196 SRPK2P78362 688 aaKnown RBP19.64■□□□□ 0.73
ZEB1-218ENST00000560196 ROBO2Q9HCK4 1378 aa19.64■□□□□ 0.73
ZEB1-218ENST00000560196 ADGRB2O60241 1585 aa19.64■□□□□ 0.73
ZEB1-218ENST00000560196 CC2D1BQ5T0F9 858 aaKnown RBP19.63■□□□□ 0.73
ZEB1-218ENST00000560196 TMC1Q8TDI8 760 aa19.63■□□□□ 0.73
ZEB1-218ENST00000560196 XRN1Q8IZH2 1706 aaKnown RBP19.62■□□□□ 0.73
ZEB1-218ENST00000560196 WASLO00401 505 aaPredicted RBP19.62■□□□□ 0.73
ZEB1-218ENST00000560196 NSD3Q9BZ95 1437 aa19.61■□□□□ 0.73
ZEB1-218ENST00000560196 AMOTL2Q9Y2J4 779 aa19.6■□□□□ 0.73
ZEB1-218ENST00000560196 CNGB1Q14028 1251 aaPredicted RBP19.59■□□□□ 0.73
ZEB1-218ENST00000560196 NSD2O96028 1365 aa19.58■□□□□ 0.73
ZEB1-218ENST00000560196 PNISRQ8TF01 805 aaKnown RBP19.58■□□□□ 0.72
ZEB1-218ENST00000560196 TERF2IPQ9NYB0 399 aa19.58■□□□□ 0.72
ZEB1-218ENST00000560196 NPHP4O75161 1426 aaPredicted RBP19.58■□□□□ 0.72
ZEB1-218ENST00000560196 ATP7BP35670 1465 aa19.57■□□□□ 0.72
ZEB1-218ENST00000560196 CGNL1Q0VF96 1302 aa19.56■□□□□ 0.72
ZEB1-218ENST00000560196 CD163L1Q9NR16 1453 aa19.56■□□□□ 0.72
ZEB1-218ENST00000560196 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.56■□□□□ 0.72
ZEB1-218ENST00000560196 A0A1W2PP64 1363 aa19.56■□□□□ 0.72
ZEB1-218ENST00000560196 PPP2R1AP30153 589 aa19.55■□□□□ 0.72
ZEB1-218ENST00000560196 INSRP06213 1382 aa19.55■□□□□ 0.72
ZEB1-218ENST00000560196 HDGFL2Q7Z4V5 671 aaPredicted RBP19.54■□□□□ 0.72
ZEB1-218ENST00000560196 FAM9BQ8IZU0 186 aa19.54■□□□□ 0.72
ZEB1-218ENST00000560196 CHD2O14647 1828 aaKnown RBP19.53■□□□□ 0.72
ZEB1-218ENST00000560196 NUDT16Q96DE0 195 aaKnown RBP19.52■□□□□ 0.72
ZEB1-218ENST00000560196 CABP1Q9NZU7 370 aa19.51■□□□□ 0.71
ZEB1-218ENST00000560196 CCDC61Q9Y6R9 512 aa19.51■□□□□ 0.71
ZEB1-218ENST00000560196 CPSF1Q10570 1443 aaKnown RBP19.51■□□□□ 0.71
ZEB1-218ENST00000560196 KCNA6P17658 529 aa19.5■□□□□ 0.71
ZEB1-218ENST00000560196 PPIP5K1Q6PFW1 1433 aa19.5■□□□□ 0.71
ZEB1-218ENST00000560196 KDM4FA0A1W2PPD8 638 aa19.49■□□□□ 0.71
ZEB1-218ENST00000560196 HNRNPUQ00839 825 aaKnown RBP eCLIP19.49■□□□□ 0.71
ZEB1-218ENST00000560196 CDC42BPGQ6DT37 1551 aa19.49■□□□□ 0.71
ZEB1-218ENST00000560196 TOPAZ1Q8N9V7 1692 aa19.47■□□□□ 0.71
ZEB1-218ENST00000560196 MORC1Q86VD1 984 aa19.47■□□□□ 0.71
ZEB1-218ENST00000560196 NWD1Q149M9 1564 aa19.47■□□□□ 0.71
ZEB1-218ENST00000560196 PRR36Q9H6K5 1346 aa19.47■□□□□ 0.71
ZEB1-218ENST00000560196 NCKAP5LQ9HCH0 1330 aa19.47■□□□□ 0.71
ZEB1-218ENST00000560196 PLEKHG3A1L390 1219 aa19.46■□□□□ 0.71
ZEB1-218ENST00000560196 EDC4Q6P2E9 1401 aaKnown RBP19.45■□□□□ 0.7
ZEB1-218ENST00000560196 ZNF692Q9BU19 519 aaPredicted RBP19.45■□□□□ 0.7
ZEB1-218ENST00000560196 ZBED9Q6R2W3 1325 aa19.45■□□□□ 0.7
ZEB1-218ENST00000560196 ANKARQ7Z5J8 1434 aa19.44■□□□□ 0.7
ZEB1-218ENST00000560196 ANKRD26Q9UPS8 1709 aa19.44■□□□□ 0.7
ZEB1-218ENST00000560196 POLR3AO14802 1390 aaPredicted RBP19.44■□□□□ 0.7
ZEB1-218ENST00000560196 AKAP12Q02952 1782 aa19.42■□□□□ 0.7
ZEB1-218ENST00000560196 FYB1O15117 783 aa19.42■□□□□ 0.7
ZEB1-218ENST00000560196 MON2Q7Z3U7 1717 aa19.42■□□□□ 0.7
ZEB1-218ENST00000560196 KIF20BQ96Q89 1820 aa19.4■□□□□ 0.7
ZEB1-218ENST00000560196 BLMP54132 1417 aaPredicted RBP19.4■□□□□ 0.7
ZEB1-218ENST00000560196 NKTRP30414 1462 aaKnown RBP19.4■□□□□ 0.7
ZEB1-218ENST00000560196 ITSN1Q15811 1721 aa19.39■□□□□ 0.7
ZEB1-218ENST00000560196 ADGRL3Q9HAR2 1447 aa19.39■□□□□ 0.69
ZEB1-218ENST00000560196 FMN2Q9NZ56 1722 aa19.39■□□□□ 0.69
ZEB1-218ENST00000560196 LMTK3Q96Q04 1460 aa19.38■□□□□ 0.69
ZEB1-218ENST00000560196 SCAF1Q9H7N4 1312 aaKnown RBP19.37■□□□□ 0.69
ZEB1-218ENST00000560196 WDR43Q15061 677 aaKnown RBP eCLIP19.36■□□□□ 0.69
ZEB1-218ENST00000560196 GGNBP2Q9H3C7 697 aa19.36■□□□□ 0.69
ZEB1-218ENST00000560196 NALCNQ8IZF0 1738 aa19.36■□□□□ 0.69
ZEB1-218ENST00000560196 ACEP12821 1306 aa19.35■□□□□ 0.69
ZEB1-218ENST00000560196 USP6P35125 1406 aa19.34■□□□□ 0.69
ZEB1-218ENST00000560196 NRKQ7Z2Y5 1582 aa19.34■□□□□ 0.69
ZEB1-218ENST00000560196 SSH2Q76I76 1423 aa19.34■□□□□ 0.69
ZEB1-218ENST00000560196 NCOA3Q9Y6Q9 1424 aa19.34■□□□□ 0.69
ZEB1-218ENST00000560196 CFAP53Q96M91 514 aa19.33■□□□□ 0.68
ZEB1-218ENST00000560196 MTHFSP49914 203 aa19.32■□□□□ 0.68
ZEB1-218ENST00000560196 ADAMTS8Q9UP79 889 aa19.32■□□□□ 0.68
ZEB1-218ENST00000560196 TTC21BQ7Z4L5 1316 aa19.31■□□□□ 0.68
ZEB1-218ENST00000560196 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.31■□□□□ 0.683e-6■■■■□ 22.7
ZEB1-218ENST00000560196 TTC21AQ8NDW8 1320 aa19.3■□□□□ 0.68
ZEB1-218ENST00000560196 TNNT2P45379 298 aaPredicted RBP19.3■□□□□ 0.68
ZEB1-218ENST00000560196 HSPA2P54652 639 aa19.3■□□□□ 0.68
ZEB1-218ENST00000560196 AATKQ6ZMQ8 1374 aa19.3■□□□□ 0.68
ZEB1-218ENST00000560196 SHPRHQ149N8 1683 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms