RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', human

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRPA1-208	ENST00000559686	ZNF326	Q5BKZ1	582 aa	Known RBP	13.95	□□□□□ -0.18
SNRPA1-208	ENST00000559686	C1orf167	Q5SNV9	1468 aa		13.94	□□□□□ -0.18
SNRPA1-208	ENST00000559686	DEFB132	Q7Z7B7	95 aa		13.94	□□□□□ -0.18
SNRPA1-208	ENST00000559686	CCDC125	Q86Z20	511 aa		13.94	□□□□□ -0.18
SNRPA1-208	ENST00000559686	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.94	□□□□□ -0.18
SNRPA1-208	ENST00000559686	PTCH1	Q13635	1447 aa		13.93	□□□□□ -0.18
SNRPA1-208	ENST00000559686	MARF1	Q9Y4F3	1742 aa	Known RBP	13.93	□□□□□ -0.18
SNRPA1-208	ENST00000559686	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.92	□□□□□ -0.18
SNRPA1-208	ENST00000559686	LAMC1	P11047	1609 aa		13.91	□□□□□ -0.18
SNRPA1-208	ENST00000559686	PSD	A5PKW4	1024 aa	Predicted RBP	13.91	□□□□□ -0.18
SNRPA1-208	ENST00000559686	BRWD3	Q6RI45	1802 aa		13.91	□□□□□ -0.18
SNRPA1-208	ENST00000559686	SOS2	Q07890	1332 aa	Predicted RBP	13.9	□□□□□ -0.18
SNRPA1-208	ENST00000559686	IQGAP3	Q86VI3	1631 aa		13.9	□□□□□ -0.18
SNRPA1-208	ENST00000559686	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.9	□□□□□ -0.18
SNRPA1-208	ENST00000559686	XPC	Q01831	940 aa	Predicted RBP	13.9	□□□□□ -0.18
SNRPA1-208	ENST00000559686	GJD4	Q96KN9	370 aa	Predicted RBP	13.9	□□□□□ -0.18
SNRPA1-208	ENST00000559686	BCL9L	Q86UU0	1499 aa		13.9	□□□□□ -0.18
SNRPA1-208	ENST00000559686	LRP5	O75197	1615 aa		13.9	□□□□□ -0.19
SNRPA1-208	ENST00000559686	BLM	P54132	1417 aa	Predicted RBP	13.9	□□□□□ -0.19
SNRPA1-208	ENST00000559686	SF3B2	Q13435	895 aa	Known RBP	13.89	□□□□□ -0.19
SNRPA1-208	ENST00000559686	SPHKAP	Q2M3C7	1700 aa		13.87	□□□□□ -0.19
SNRPA1-208	ENST00000559686	DSG3	P32926	999 aa		13.87	□□□□□ -0.19
SNRPA1-208	ENST00000559686	GLI3	P10071	1580 aa		13.87	□□□□□ -0.19
SNRPA1-208	ENST00000559686	MYOM2	P54296	1465 aa		13.87	□□□□□ -0.19
SNRPA1-208	ENST00000559686	NUP155	O75694	1391 aa		13.86	□□□□□ -0.19
SNRPA1-208	ENST00000559686	PLEKHG5	O94827	1062 aa		13.86	□□□□□ -0.19
SNRPA1-208	ENST00000559686	RALGAPB	Q86X10	1494 aa		13.86	□□□□□ -0.19
SNRPA1-208	ENST00000559686	ESCO1	Q5FWF5	840 aa		13.85	□□□□□ -0.19
SNRPA1-208	ENST00000559686	ROBO2	Q9HCK4	1378 aa		13.84	□□□□□ -0.19
SNRPA1-208	ENST00000559686	SLC4A2	P04920	1241 aa		13.84	□□□□□ -0.19
SNRPA1-208	ENST00000559686	NEXMIF	Q5QGS0	1516 aa		13.84	□□□□□ -0.19
SNRPA1-208	ENST00000559686	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.84	□□□□□ -0.19
SNRPA1-208	ENST00000559686	NUTM2F	A1L443	756 aa		13.83	□□□□□ -0.2
SNRPA1-208	ENST00000559686	CCDC9	Q9Y3X0	531 aa	Known RBP	13.83	□□□□□ -0.2
SNRPA1-208	ENST00000559686	FOXO3	O43524	673 aa		13.82	□□□□□ -0.2
SNRPA1-208	ENST00000559686	UNC5CL	Q8IV45	518 aa		13.82	□□□□□ -0.2
SNRPA1-208	ENST00000559686	SEPT12	Q8IYM1	358 aa		13.82	□□□□□ -0.2
SNRPA1-208	ENST00000559686	NPHP3	Q7Z494	1330 aa		13.82	□□□□□ -0.2
SNRPA1-208	ENST00000559686	CLTCL1	P53675	1640 aa		13.82	□□□□□ -0.2
SNRPA1-208	ENST00000559686	PXDN	Q92626	1479 aa		13.81	□□□□□ -0.2
SNRPA1-208	ENST00000559686	ITGAE	P38570	1179 aa		13.81	□□□□□ -0.2
SNRPA1-208	ENST00000559686		A0A0G2JS52	829 aa		13.8	□□□□□ -0.2
SNRPA1-208	ENST00000559686	HRC	P23327	699 aa		13.8	□□□□□ -0.2
SNRPA1-208	ENST00000559686	MYT1	Q01538	1121 aa		13.8	□□□□□ -0.2
SNRPA1-208	ENST00000559686	KIF1B	O60333	1816 aa		13.79	□□□□□ -0.2
SNRPA1-208	ENST00000559686	HAP1	P54257	671 aa	Predicted RBP	13.78	□□□□□ -0.2
SNRPA1-208	ENST00000559686	SLIT2	O94813	1529 aa		13.78	□□□□□ -0.2
SNRPA1-208	ENST00000559686	BAG6	P46379	1132 aa		13.77	□□□□□ -0.21
SNRPA1-208	ENST00000559686	R3HDM1	Q15032	1099 aa	Known RBP	13.77	□□□□□ -0.21
SNRPA1-208	ENST00000559686	KRT27	Q7Z3Y8	459 aa		13.77	□□□□□ -0.21
SNRPA1-208	ENST00000559686	USP32	Q8NFA0	1604 aa		13.77	□□□□□ -0.21
SNRPA1-208	ENST00000559686	PLCH1	Q4KWH8	1693 aa		13.76	□□□□□ -0.21
SNRPA1-208	ENST00000559686	CABLES1	Q8TDN4	633 aa		13.75	□□□□□ -0.21
SNRPA1-208	ENST00000559686	CDC42BPG	Q6DT37	1551 aa		13.75	□□□□□ -0.21
SNRPA1-208	ENST00000559686	HFM1	A2PYH4	1435 aa		13.74	□□□□□ -0.21
SNRPA1-208	ENST00000559686	EN1	Q05925	392 aa	Predicted RBP	13.74	□□□□□ -0.21
SNRPA1-208	ENST00000559686	FAM182B	Q5T319	152 aa		13.74	□□□□□ -0.21
SNRPA1-208	ENST00000559686	YY1	P25490	414 aa		13.73	□□□□□ -0.21
SNRPA1-208	ENST00000559686	STK26	Q9P289	416 aa		13.73	□□□□□ -0.21
SNRPA1-208	ENST00000559686	NAIP	Q13075	1403 aa		13.73	□□□□□ -0.21
SNRPA1-208	ENST00000559686	LRPPRC	P42704	1394 aa	Known RBP	13.72	□□□□□ -0.21
SNRPA1-208	ENST00000559686	ROCK1	Q13464	1354 aa		13.72	□□□□□ -0.21
SNRPA1-208	ENST00000559686	SPATA31A3	Q5VYP0	1347 aa		13.72	□□□□□ -0.21
SNRPA1-208	ENST00000559686	VPS72	Q15906	364 aa		13.72	□□□□□ -0.21
SNRPA1-208	ENST00000559686	LMOD2	Q6P5Q4	547 aa		13.72	□□□□□ -0.21
SNRPA1-208	ENST00000559686	VGF	O15240	615 aa	Predicted RBP	13.71	□□□□□ -0.21
SNRPA1-208	ENST00000559686	FAM98C	Q17RN3	349 aa	Known RBP	13.71	□□□□□ -0.21
SNRPA1-208	ENST00000559686	WAPL	Q7Z5K2	1190 aa		13.71	□□□□□ -0.21
SNRPA1-208	ENST00000559686	RGPD1	P0DJD0	1748 aa		13.7	□□□□□ -0.22
SNRPA1-208	ENST00000559686	KRT28	Q7Z3Y7	464 aa		13.7	□□□□□ -0.22
SNRPA1-208	ENST00000559686	ABCA3	Q99758	1704 aa		13.7	□□□□□ -0.22
SNRPA1-208	ENST00000559686	NWD2	Q9ULI1	1742 aa		13.7	□□□□□ -0.22
SNRPA1-208	ENST00000559686	RGPD8	O14715	1765 aa	Predicted RBP	13.69	□□□□□ -0.22
SNRPA1-208	ENST00000559686	KIF1A	Q12756	1690 aa		13.69	□□□□□ -0.22
SNRPA1-208	ENST00000559686	PPL	O60437	1756 aa		13.68	□□□□□ -0.22
SNRPA1-208	ENST00000559686	FMN2	Q9NZ56	1722 aa		13.68	□□□□□ -0.22
SNRPA1-208	ENST00000559686	CCDC144A	A2RUR9	1427 aa		13.67	□□□□□ -0.22
SNRPA1-208	ENST00000559686	EZH2	Q15910	746 aa	Known RBP	13.67	□□□□□ -0.22
SNRPA1-208	ENST00000559686	TNS1	Q9HBL0	1735 aa	Known RBP	13.67	□□□□□ -0.22
SNRPA1-208	ENST00000559686	PRAG1	Q86YV5	1406 aa		13.66	□□□□□ -0.22
SNRPA1-208	ENST00000559686	ONECUT3	O60422	494 aa	Predicted RBP	13.66	□□□□□ -0.22
SNRPA1-208	ENST00000559686	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.66	□□□□□ -0.22
SNRPA1-208	ENST00000559686	PLEKHH1	Q9ULM0	1364 aa		13.66	□□□□□ -0.22
SNRPA1-208	ENST00000559686	TNS3	Q68CZ2	1445 aa		13.65	□□□□□ -0.22
SNRPA1-208	ENST00000559686	NRAP	Q86VF7	1730 aa		13.65	□□□□□ -0.22
SNRPA1-208	ENST00000559686	IFT172	Q9UG01	1749 aa		13.64	□□□□□ -0.23
SNRPA1-208	ENST00000559686	FAM83G	A6ND36	823 aa		13.64	□□□□□ -0.23
SNRPA1-208	ENST00000559686	TMEM132E	Q6IEE7	984 aa		13.63	□□□□□ -0.23
SNRPA1-208	ENST00000559686	BTG4	Q9NY30	223 aa		13.63	□□□□□ -0.23
SNRPA1-208	ENST00000559686	PSME1	Q06323	249 aa		13.62	□□□□□ -0.23
SNRPA1-208	ENST00000559686	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.62	□□□□□ -0.23
SNRPA1-208	ENST00000559686	PHF8	Q9UPP1	1060 aa		13.62	□□□□□ -0.23
SNRPA1-208	ENST00000559686	TRIM37	O94972	964 aa		13.61	□□□□□ -0.23
SNRPA1-208	ENST00000559686	ADGRF5	Q8IZF2	1346 aa		13.61	□□□□□ -0.23
SNRPA1-208	ENST00000559686	ABCB7	O75027	752 aa		13.6	□□□□□ -0.23
SNRPA1-208	ENST00000559686	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.6	□□□□□ -0.23
SNRPA1-208	ENST00000559686	RPGRIP1L	Q68CZ1	1315 aa		13.6	□□□□□ -0.23
SNRPA1-208	ENST00000559686	KNDC1	Q76NI1	1749 aa		13.59	□□□□□ -0.23
SNRPA1-208	ENST00000559686	RGL3	Q3MIN7	710 aa		13.59	□□□□□ -0.23
SNRPA1-208	ENST00000559686	POTEH	Q6S545	545 aa		13.59	□□□□□ -0.23

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