RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 ANKRD30BQ9BXX2 1392 aa30.41■■■□□ 2.46
TSPAN3-206ENST00000559373 AFF2P51816 1311 aa30.39■■■□□ 2.46
TSPAN3-206ENST00000559373 PLEKHH1Q9ULM0 1364 aa30.39■■■□□ 2.45
TSPAN3-206ENST00000559373 PIK3C2GO75747 1445 aa30.39■■■□□ 2.45
TSPAN3-206ENST00000559373 C8orf37Q96NL8 207 aa30.38■■■□□ 2.45
TSPAN3-206ENST00000559373 CDC42BPGQ6DT37 1551 aa30.37■■■□□ 2.45
TSPAN3-206ENST00000559373 ADAMTS2O95450 1211 aa30.36■■■□□ 2.45
TSPAN3-206ENST00000559373 ESCO1Q5FWF5 840 aa30.36■■■□□ 2.45
TSPAN3-206ENST00000559373 LRPPRCP42704 1394 aaKnown RBP30.35■■■□□ 2.45
TSPAN3-206ENST00000559373 XPCQ01831 940 aaPredicted RBP30.34■■■□□ 2.45
TSPAN3-206ENST00000559373 SOS2Q07890 1332 aaPredicted RBP30.33■■■□□ 2.45
TSPAN3-206ENST00000559373 FMN2Q9NZ56 1722 aa30.32■■■□□ 2.44
TSPAN3-206ENST00000559373 TECPR2O15040 1411 aa30.31■■■□□ 2.44
TSPAN3-206ENST00000559373 YTHDC2Q9H6S0 1430 aaKnown RBP30.31■■■□□ 2.44
TSPAN3-206ENST00000559373 RXRBP28702 533 aa30.31■■■□□ 2.44
TSPAN3-206ENST00000559373 CFAP70Q5T0N1 1121 aa30.31■■■□□ 2.44
TSPAN3-206ENST00000559373 ABCC11Q96J66 1382 aa30.29■■■□□ 2.44
TSPAN3-206ENST00000559373 FOXO3O43524 673 aa30.28■■■□□ 2.44
TSPAN3-206ENST00000559373 MARF1Q9Y4F3 1742 aaKnown RBP30.27■■■□□ 2.44
TSPAN3-206ENST00000559373 NGLY1Q96IV0 654 aa30.26■■■□□ 2.43
TSPAN3-206ENST00000559373 C14orf93Q9H972 538 aaKnown RBP30.26■■■□□ 2.43
TSPAN3-206ENST00000559373 COL22A1Q8NFW1 1626 aaPredicted RBP30.25■■■□□ 2.43
TSPAN3-206ENST00000559373 SAFB2Q14151 953 aaKnown RBP eCLIP30.25■■■□□ 2.43
TSPAN3-206ENST00000559373 QTRT2Q9H974 415 aaKnown RBP30.25■■■□□ 2.43
TSPAN3-206ENST00000559373 PXDNQ92626 1479 aa30.25■■■□□ 2.43
TSPAN3-206ENST00000559373 NRXN1Q9ULB1 1477 aa30.24■■■□□ 2.43
TSPAN3-206ENST00000559373 ACIN1Q9UKV3 1341 aaKnown RBP30.23■■■□□ 2.43
TSPAN3-206ENST00000559373 MYOM2P54296 1465 aa30.23■■■□□ 2.43
TSPAN3-206ENST00000559373 NPHP3Q7Z494 1330 aa30.22■■■□□ 2.43
TSPAN3-206ENST00000559373 KDM2AQ9Y2K7 1162 aa30.21■■■□□ 2.43
TSPAN3-206ENST00000559373 DHX57Q6P158 1386 aaKnown RBP30.19■■■□□ 2.42
TSPAN3-206ENST00000559373 KIF1AQ12756 1690 aa30.17■■■□□ 2.42
TSPAN3-206ENST00000559373 UPF1Q92900 1129 aaKnown RBP eCLIP30.17■■■□□ 2.42
TSPAN3-206ENST00000559373 PRAM1Q96QH2 718 aa30.16■■■□□ 2.42
TSPAN3-206ENST00000559373 RGS12O14924 1447 aa30.14■■■□□ 2.42
TSPAN3-206ENST00000559373 USP21Q9UK80 565 aa30.14■■■□□ 2.42
TSPAN3-206ENST00000559373 PLEKHG5O94827 1062 aa30.13■■■□□ 2.41
TSPAN3-206ENST00000559373 RBM6P78332 1123 aaKnown RBP30.13■■■□□ 2.41
TSPAN3-206ENST00000559373 DCAF11Q8TEB1 546 aa30.13■■■□□ 2.41
TSPAN3-206ENST00000559373 CDK12Q9NYV4 1490 aaPredicted RBP30.12■■■□□ 2.41
TSPAN3-206ENST00000559373 SIRT1Q96EB6 747 aa30.11■■■□□ 2.41
TSPAN3-206ENST00000559373 TRAK1Q9UPV9 953 aa30.11■■■□□ 2.41
TSPAN3-206ENST00000559373 POGKQ9P215 609 aa30.1■■■□□ 2.41
TSPAN3-206ENST00000559373 USP32Q8NFA0 1604 aa30.1■■■□□ 2.41
TSPAN3-206ENST00000559373 ADGRB1O14514 1584 aa30.09■■■□□ 2.41
TSPAN3-206ENST00000559373 KRT28Q7Z3Y7 464 aa30.08■■■□□ 2.41
TSPAN3-206ENST00000559373 HIRIP3Q9BW71 556 aaPredicted RBP30.08■■■□□ 2.41
TSPAN3-206ENST00000559373 PHF8Q9UPP1 1060 aa30.06■■■□□ 2.4
TSPAN3-206ENST00000559373 FNBP4Q8N3X1 1017 aaPredicted RBP30.05■■■□□ 2.4
TSPAN3-206ENST00000559373 DLC1Q96QB1 1528 aa30.05■■■□□ 2.4
TSPAN3-206ENST00000559373 SPATA31A3Q5VYP0 1347 aa30.04■■■□□ 2.4
TSPAN3-206ENST00000559373 PMFBP1Q8TBY8 1022 aa30.03■■■□□ 2.4
TSPAN3-206ENST00000559373 TRPC5Q9UL62 973 aaPredicted RBP30.03■■■□□ 2.4
TSPAN3-206ENST00000559373 MINK1Q8N4C8 1332 aaPredicted RBP30.02■■■□□ 2.4
TSPAN3-206ENST00000559373 CABLES1Q8TDN4 633 aa30.01■■■□□ 2.39
TSPAN3-206ENST00000559373 ARHGEF28Q8N1W1 1705 aaKnown RBP30.01■■■□□ 2.39
TSPAN3-206ENST00000559373 ABCA3Q99758 1704 aa30.01■■■□□ 2.39
TSPAN3-206ENST00000559373 BCL9LQ86UU0 1499 aa30■■■□□ 2.39
TSPAN3-206ENST00000559373 ATRNO75882 1429 aa30■■■□□ 2.39
TSPAN3-206ENST00000559373 LMOD2Q6P5Q4 547 aa30■■■□□ 2.39
TSPAN3-206ENST00000559373 ADGRB2O60241 1585 aa29.98■■■□□ 2.39
TSPAN3-206ENST00000559373 HRCP23327 699 aa29.98■■■□□ 2.39
TSPAN3-206ENST00000559373 PSME1Q06323 249 aa29.97■■■□□ 2.39
TSPAN3-206ENST00000559373 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.96■■■□□ 2.39
TSPAN3-206ENST00000559373 TNS3Q68CZ2 1445 aa29.96■■■□□ 2.39
TSPAN3-206ENST00000559373 HAP1P54257 671 aaPredicted RBP29.95■■■□□ 2.39
TSPAN3-206ENST00000559373 PLCH1Q4KWH8 1693 aa29.95■■■□□ 2.38
TSPAN3-206ENST00000559373 BRWD3Q6RI45 1802 aa29.94■■■□□ 2.38
TSPAN3-206ENST00000559373 TRPM3Q9HCF6 1732 aaPredicted RBP29.94■■■□□ 2.38
TSPAN3-206ENST00000559373 PRR36Q9H6K5 1346 aa29.92■■■□□ 2.38
TSPAN3-206ENST00000559373 EP400Q96L91 3159 aa29.91■■■□□ 2.38
TSPAN3-206ENST00000559373 ANKARQ7Z5J8 1434 aa29.89■■■□□ 2.38
TSPAN3-206ENST00000559373 GLI3P10071 1580 aa29.89■■■□□ 2.38
TSPAN3-206ENST00000559373 SLIT2O94813 1529 aa29.88■■■□□ 2.37
TSPAN3-206ENST00000559373 GJD4Q96KN9 370 aaPredicted RBP29.88■■■□□ 2.37
TSPAN3-206ENST00000559373 ALS2Q96Q42 1657 aa29.88■■■□□ 2.37
TSPAN3-206ENST00000559373 TULP4Q9NRJ4 1543 aa29.87■■■□□ 2.37
TSPAN3-206ENST00000559373 WASLO00401 505 aaPredicted RBP29.87■■■□□ 2.37
TSPAN3-206ENST00000559373 ITSN1Q15811 1721 aa29.87■■■□□ 2.37
TSPAN3-206ENST00000559373 SBNO1A3KN83 1393 aa29.87■■■□□ 2.37
TSPAN3-206ENST00000559373 UNC5CLQ8IV45 518 aa29.86■■■□□ 2.37
TSPAN3-206ENST00000559373 ATAD2Q6PL18 1390 aa29.85■■■□□ 2.37
TSPAN3-206ENST00000559373 NWD2Q9ULI1 1742 aa29.85■■■□□ 2.37
TSPAN3-206ENST00000559373 KIAA1210Q9ULL0 1709 aa29.84■■■□□ 2.37
TSPAN3-206ENST00000559373 RALGAPBQ86X10 1494 aa29.83■■■□□ 2.37
TSPAN3-206ENST00000559373 STAC3Q96MF2 364 aa29.83■■■□□ 2.37
TSPAN3-206ENST00000559373 ARHGEF10O15013 1369 aa29.81■■■□□ 2.36
TSPAN3-206ENST00000559373 NBPF1Q3BBV0 1214 aa29.8■■■□□ 2.36
TSPAN3-206ENST00000559373 CRYBG1Q9Y4K1 1723 aa29.79■■■□□ 2.36
TSPAN3-206ENST00000559373 NGDNQ8NEJ9 315 aaKnown RBP29.79■■■□□ 2.36
TSPAN3-206ENST00000559373 GPRASP1Q5JY77 1395 aa29.78■■■□□ 2.36
TSPAN3-206ENST00000559373 PAK3O75914 559 aaPredicted RBP29.78■■■□□ 2.36
TSPAN3-206ENST00000559373 CCDC9Q9Y3X0 531 aaKnown RBP29.78■■■□□ 2.36
TSPAN3-206ENST00000559373 EIF3AQ14152 1382 aaKnown RBP29.77■■■□□ 2.36
TSPAN3-206ENST00000559373 NRAPQ86VF7 1730 aa29.77■■■□□ 2.36
TSPAN3-206ENST00000559373 FAM83GA6ND36 823 aa29.77■■■□□ 2.36
TSPAN3-206ENST00000559373 NUDT16Q96DE0 195 aaKnown RBP29.76■■■□□ 2.35
TSPAN3-206ENST00000559373 ATP7BP35670 1465 aa29.75■■■□□ 2.35
TSPAN3-206ENST00000559373 CDK19Q9BWU1 502 aa29.75■■■□□ 2.35
TSPAN3-206ENST00000559373 TOPAZ1Q8N9V7 1692 aa29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms