RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 NEXMIFQ5QGS0 1516 aa16.17■□□□□ 0.18
TRAV33-201ENST00000557514 SPHKAPQ2M3C7 1700 aa16.16■□□□□ 0.18
TRAV33-201ENST00000557514 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.16■□□□□ 0.18
TRAV33-201ENST00000557514 NUP155O75694 1391 aa16.15■□□□□ 0.18
TRAV33-201ENST00000557514 ROCK1Q13464 1354 aa16.15■□□□□ 0.18
TRAV33-201ENST00000557514 FAM50AQ14320 339 aaKnown RBP16.15■□□□□ 0.18
TRAV33-201ENST00000557514 UNC5CLQ8IV45 518 aa16.15■□□□□ 0.18
TRAV33-201ENST00000557514 HFM1A2PYH4 1435 aa16.14■□□□□ 0.17
TRAV33-201ENST00000557514 HRCP23327 699 aa16.14■□□□□ 0.17
TRAV33-201ENST00000557514 APLP2Q06481 763 aa16.14■□□□□ 0.17
TRAV33-201ENST00000557514 SF3B2Q13435 895 aaKnown RBP16.14■□□□□ 0.17
TRAV33-201ENST00000557514 ZNF326Q5BKZ1 582 aaKnown RBP16.14■□□□□ 0.17
TRAV33-201ENST00000557514 CDC42BPGQ6DT37 1551 aa16.13■□□□□ 0.17
TRAV33-201ENST00000557514 PSDA5PKW4 1024 aaPredicted RBP16.11■□□□□ 0.17
TRAV33-201ENST00000557514 SEPT12Q8IYM1 358 aa16.1■□□□□ 0.17
TRAV33-201ENST00000557514 XPCQ01831 940 aaPredicted RBP16.09■□□□□ 0.17
TRAV33-201ENST00000557514 ESCO1Q5FWF5 840 aa16.09■□□□□ 0.17
TRAV33-201ENST00000557514 MARF1Q9Y4F3 1742 aaKnown RBP16.08■□□□□ 0.17
TRAV33-201ENST00000557514 LOC105371045A0A1W2PR82 267 aa16.08■□□□□ 0.16
TRAV33-201ENST00000557514 FOXO3O43524 673 aa16.08■□□□□ 0.16
TRAV33-201ENST00000557514 LRPPRCP42704 1394 aaKnown RBP16.08■□□□□ 0.16
TRAV33-201ENST00000557514 ONECUT3O60422 494 aaPredicted RBP16.07■□□□□ 0.16
TRAV33-201ENST00000557514 VPS72Q15906 364 aa16.07■□□□□ 0.16
TRAV33-201ENST00000557514 USP32Q8NFA0 1604 aa16.07■□□□□ 0.16
TRAV33-201ENST00000557514 CLTCL1P53675 1640 aa16.06■□□□□ 0.16
TRAV33-201ENST00000557514 BAG6P46379 1132 aa16.06■□□□□ 0.16
TRAV33-201ENST00000557514 KRT27Q7Z3Y8 459 aa16.06■□□□□ 0.16
TRAV33-201ENST00000557514 SPATA31A3Q5VYP0 1347 aa16.05■□□□□ 0.16
TRAV33-201ENST00000557514 CCDC144AA2RUR9 1427 aa16.03■□□□□ 0.16
TRAV33-201ENST00000557514 NAIPQ13075 1403 aa16.03■□□□□ 0.16
TRAV33-201ENST00000557514 DISP2A7MBM2 1401 aa16.02■□□□□ 0.16
TRAV33-201ENST00000557514 BRWD3Q6RI45 1802 aa16.02■□□□□ 0.16
TRAV33-201ENST00000557514 VGFO15240 615 aaPredicted RBP16.01■□□□□ 0.15
TRAV33-201ENST00000557514 TECPR2O15040 1411 aa16.01■□□□□ 0.15
TRAV33-201ENST00000557514 R3HDM1Q15032 1099 aaKnown RBP16■□□□□ 0.15
TRAV33-201ENST00000557514 TNS3Q68CZ2 1445 aa16■□□□□ 0.15
TRAV33-201ENST00000557514 YY1P25490 414 aa15.98■□□□□ 0.15
TRAV33-201ENST00000557514 EN1Q05925 392 aaPredicted RBP15.98■□□□□ 0.15
TRAV33-201ENST00000557514 CCDC9Q9Y3X0 531 aaKnown RBP15.96■□□□□ 0.15
TRAV33-201ENST00000557514 NWD2Q9ULI1 1742 aa15.96■□□□□ 0.15
TRAV33-201ENST00000557514 RPGRIP1LQ68CZ1 1315 aa15.95■□□□□ 0.14
TRAV33-201ENST00000557514 NUTM2FA1L443 756 aa15.95■□□□□ 0.14
TRAV33-201ENST00000557514 KIF1AQ12756 1690 aa15.95■□□□□ 0.14
TRAV33-201ENST00000557514 PLCH1Q4KWH8 1693 aa15.95■□□□□ 0.14
TRAV33-201ENST00000557514 HAP1P54257 671 aaPredicted RBP15.94■□□□□ 0.14
TRAV33-201ENST00000557514 CABLES1Q8TDN4 633 aa15.94■□□□□ 0.14
TRAV33-201ENST00000557514 A0A0G2JS52 829 aa15.93■□□□□ 0.14
TRAV33-201ENST00000557514 MYT1Q01538 1121 aa15.93■□□□□ 0.14
TRAV33-201ENST00000557514 FAM98CQ17RN3 349 aaKnown RBP15.93■□□□□ 0.14
TRAV33-201ENST00000557514 KRT28Q7Z3Y7 464 aa15.93■□□□□ 0.14
TRAV33-201ENST00000557514 SBNO1A3KN83 1393 aa15.92■□□□□ 0.14
TRAV33-201ENST00000557514 ARHGEF10O15013 1369 aa15.92■□□□□ 0.14
TRAV33-201ENST00000557514 PLEKHH1Q9ULM0 1364 aa15.92■□□□□ 0.14
TRAV33-201ENST00000557514 WAPLQ7Z5K2 1190 aa15.91■□□□□ 0.14
TRAV33-201ENST00000557514 RGPD1P0DJD0 1748 aa15.91■□□□□ 0.14
TRAV33-201ENST00000557514 ABCC11Q96J66 1382 aa15.9■□□□□ 0.14
TRAV33-201ENST00000557514 FAM83GA6ND36 823 aa15.9■□□□□ 0.14
TRAV33-201ENST00000557514 UTRNP46939 3433 aa15.9■□□□□ 0.14
TRAV33-201ENST00000557514 ADGRB2O60241 1585 aa15.9■□□□□ 0.14
TRAV33-201ENST00000557514 FMN2Q9NZ56 1722 aa15.9■□□□□ 0.14
TRAV33-201ENST00000557514 PARD3Q8TEW0 1356 aa15.89■□□□□ 0.13
TRAV33-201ENST00000557514 NRAPQ86VF7 1730 aa15.89■□□□□ 0.13
TRAV33-201ENST00000557514 ABCA3Q99758 1704 aa15.89■□□□□ 0.13
TRAV33-201ENST00000557514 EZH2Q15910 746 aaKnown RBP15.89■□□□□ 0.13
TRAV33-201ENST00000557514 NRXN1Q9ULB1 1477 aa15.89■□□□□ 0.13
TRAV33-201ENST00000557514 TNS1Q9HBL0 1735 aaKnown RBP15.88■□□□□ 0.13
TRAV33-201ENST00000557514 FAM182BQ5T319 152 aa15.88■□□□□ 0.13
TRAV33-201ENST00000557514 CAMKK2Q96RR4 588 aa15.88■□□□□ 0.13
TRAV33-201ENST00000557514 KIF1BO60333 1816 aa15.88■□□□□ 0.13
TRAV33-201ENST00000557514 THSD7AQ9UPZ6 1657 aa15.88■□□□□ 0.13
TRAV33-201ENST00000557514 PSME1Q06323 249 aa15.87■□□□□ 0.13
TRAV33-201ENST00000557514 PHF8Q9UPP1 1060 aa15.87■□□□□ 0.13
TRAV33-201ENST00000557514 RRBP1Q9P2E9 1410 aaKnown RBP15.86■□□□□ 0.13
TRAV33-201ENST00000557514 BTG4Q9NY30 223 aa15.86■□□□□ 0.13
TRAV33-201ENST00000557514 STK26Q9P289 416 aa15.86■□□□□ 0.13
TRAV33-201ENST00000557514 SPATA31A5Q5VU36 1347 aa15.86■□□□□ 0.13
TRAV33-201ENST00000557514 SPATA31A7Q8IWB4 1347 aa15.86■□□□□ 0.13
TRAV33-201ENST00000557514 ADGRF5Q8IZF2 1346 aa15.86■□□□□ 0.13
TRAV33-201ENST00000557514 PPLO60437 1756 aa15.85■□□□□ 0.13
TRAV33-201ENST00000557514 ITGAEP38570 1179 aa15.85■□□□□ 0.13
TRAV33-201ENST00000557514 NINLQ9Y2I6 1382 aa15.85■□□□□ 0.13
TRAV33-201ENST00000557514 KNDC1Q76NI1 1749 aa15.85■□□□□ 0.13
TRAV33-201ENST00000557514 PLEKHG5O94827 1062 aa15.84■□□□□ 0.13
TRAV33-201ENST00000557514 LMOD2Q6P5Q4 547 aa15.82■□□□□ 0.12
TRAV33-201ENST00000557514 PIK3C2GO75747 1445 aa15.82■□□□□ 0.12
TRAV33-201ENST00000557514 YTHDC2Q9H6S0 1430 aaKnown RBP15.82■□□□□ 0.12
TRAV33-201ENST00000557514 TRIM37O94972 964 aa15.81■□□□□ 0.12
TRAV33-201ENST00000557514 COL14A1Q05707 1796 aaKnown RBP15.8■□□□□ 0.12
TRAV33-201ENST00000557514 FAM196AQ6ZSG2 479 aa15.8■□□□□ 0.12
TRAV33-201ENST00000557514 SPATA31E1Q6ZUB1 1445 aa15.79■□□□□ 0.12
TRAV33-201ENST00000557514 ANKARQ7Z5J8 1434 aa15.79■□□□□ 0.12
TRAV33-201ENST00000557514 ANKRD30BQ9BXX2 1392 aa15.79■□□□□ 0.12
TRAV33-201ENST00000557514 TMEM132EQ6IEE7 984 aa15.79■□□□□ 0.12
TRAV33-201ENST00000557514 SIRT1Q96EB6 747 aa15.79■□□□□ 0.12
TRAV33-201ENST00000557514 APBA3O96018 575 aa15.78■□□□□ 0.12
TRAV33-201ENST00000557514 RREB1Q92766 1687 aa15.78■□□□□ 0.12
TRAV33-201ENST00000557514 SPATA31A1Q5TZJ5 1347 aa15.77■□□□□ 0.12
TRAV33-201ENST00000557514 SPON1Q9HCB6 807 aa15.77■□□□□ 0.12
TRAV33-201ENST00000557514 PPP1R1BQ9UD71 204 aaPredicted RBP15.77■□□□□ 0.12
TRAV33-201ENST00000557514 NUP188Q5SRE5 1749 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms