RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 FOXO3O43524 673 aa18.56■□□□□ 0.56
SNX6-209ENST00000557265 XPCQ01831 940 aaPredicted RBP18.56■□□□□ 0.56
SNX6-209ENST00000557265 ATRNO75882 1429 aa18.55■□□□□ 0.56
SNX6-209ENST00000557265 RRBP1Q9P2E9 1410 aaKnown RBP18.55■□□□□ 0.56
SNX6-209ENST00000557265 KIF1BO60333 1816 aa18.53■□□□□ 0.56
SNX6-209ENST00000557265 SRCAPQ6ZRS2 3230 aa18.53■□□□□ 0.56
SNX6-209ENST00000557265 STK26Q9P289 416 aa18.53■□□□□ 0.56
SNX6-209ENST00000557265 MYOM2P54296 1465 aa18.52■□□□□ 0.56
SNX6-209ENST00000557265 NUTM2FA1L443 756 aa18.52■□□□□ 0.56
SNX6-209ENST00000557265 FOXD1Q16676 465 aa18.52■□□□□ 0.56
SNX6-209ENST00000557265 WAPLQ7Z5K2 1190 aa18.52■□□□□ 0.56
SNX6-209ENST00000557265 ZRANB1Q9UGI0 708 aa18.52■□□□□ 0.56
SNX6-209ENST00000557265 BCL9LQ86UU0 1499 aa18.52■□□□□ 0.55
SNX6-209ENST00000557265 ADGRF5Q8IZF2 1346 aa18.51■□□□□ 0.55
SNX6-209ENST00000557265 GJD4Q96KN9 370 aaPredicted RBP18.5■□□□□ 0.55
SNX6-209ENST00000557265 PXDNQ92626 1479 aa18.5■□□□□ 0.55
SNX6-209ENST00000557265 RGL3Q3MIN7 710 aa18.49■□□□□ 0.55
SNX6-209ENST00000557265 CCDC125Q86Z20 511 aa18.49■□□□□ 0.55
SNX6-209ENST00000557265 LRPPRCP42704 1394 aaKnown RBP18.49■□□□□ 0.55
SNX6-209ENST00000557265 COL22A1Q8NFW1 1626 aaPredicted RBP18.48■□□□□ 0.55
SNX6-209ENST00000557265 CDC42BPGQ6DT37 1551 aa18.47■□□□□ 0.55
SNX6-209ENST00000557265 TMEM132EQ6IEE7 984 aa18.47■□□□□ 0.55
SNX6-209ENST00000557265 UNC5CLQ8IV45 518 aa18.45■□□□□ 0.54
SNX6-209ENST00000557265 ABCC11Q96J66 1382 aa18.44■□□□□ 0.54
SNX6-209ENST00000557265 PLEKHH1Q9ULM0 1364 aa18.44■□□□□ 0.54
SNX6-209ENST00000557265 SPATA31A3Q5VYP0 1347 aa18.44■□□□□ 0.54
SNX6-209ENST00000557265 CCDC144AA2RUR9 1427 aa18.43■□□□□ 0.54
SNX6-209ENST00000557265 TECPR2O15040 1411 aa18.43■□□□□ 0.54
SNX6-209ENST00000557265 ANKRD30BQ9BXX2 1392 aa18.42■□□□□ 0.54
SNX6-209ENST00000557265 PPLO60437 1756 aa18.42■□□□□ 0.54
SNX6-209ENST00000557265 KRT28Q7Z3Y7 464 aa18.42■□□□□ 0.54
SNX6-209ENST00000557265 SPATA31E1Q6ZUB1 1445 aa18.4■□□□□ 0.54
SNX6-209ENST00000557265 RALGAPBQ86X10 1494 aa18.39■□□□□ 0.54
SNX6-209ENST00000557265 SLIT2O94813 1529 aa18.39■□□□□ 0.54
SNX6-209ENST00000557265 HAP1P54257 671 aaPredicted RBP18.39■□□□□ 0.53
SNX6-209ENST00000557265 MPHOSPH9Q99550 1183 aa18.39■□□□□ 0.53
SNX6-209ENST00000557265 PLEKHG5O94827 1062 aa18.38■□□□□ 0.53
SNX6-209ENST00000557265 EP400Q96L91 3159 aa18.37■□□□□ 0.53
SNX6-209ENST00000557265 SEPT12Q8IYM1 358 aa18.37■□□□□ 0.53
SNX6-209ENST00000557265 CABLES1Q8TDN4 633 aa18.37■□□□□ 0.53
SNX6-209ENST00000557265 SIRT1Q96EB6 747 aa18.37■□□□□ 0.53
SNX6-209ENST00000557265 PHF8Q9UPP1 1060 aa18.37■□□□□ 0.53
SNX6-209ENST00000557265 BLMP54132 1417 aaPredicted RBP18.37■□□□□ 0.53
SNX6-209ENST00000557265 YTHDC2Q9H6S0 1430 aaKnown RBP18.37■□□□□ 0.53
SNX6-209ENST00000557265 PIK3C2GO75747 1445 aa18.36■□□□□ 0.53
SNX6-209ENST00000557265 PSME1Q06323 249 aa18.36■□□□□ 0.53
SNX6-209ENST00000557265 VPS72Q15906 364 aa18.35■□□□□ 0.53
SNX6-209ENST00000557265 DEFB132Q7Z7B7 95 aa18.35■□□□□ 0.53
SNX6-209ENST00000557265 C14orf93Q9H972 538 aaKnown RBP18.35■□□□□ 0.53
SNX6-209ENST00000557265 GLI3P10071 1580 aa18.34■□□□□ 0.53
SNX6-209ENST00000557265 LMOD2Q6P5Q4 547 aa18.34■□□□□ 0.53
SNX6-209ENST00000557265 CCDC9Q9Y3X0 531 aaKnown RBP18.34■□□□□ 0.53
SNX6-209ENST00000557265 SF3B2Q13435 895 aaKnown RBP18.33■□□□□ 0.52
SNX6-209ENST00000557265 TNS3Q68CZ2 1445 aa18.32■□□□□ 0.52
SNX6-209ENST00000557265 SAFB2Q14151 953 aaKnown RBP eCLIP18.32■□□□□ 0.52
SNX6-209ENST00000557265 CFAP70Q5T0N1 1121 aa18.32■□□□□ 0.52
SNX6-209ENST00000557265 MARF1Q9Y4F3 1742 aaKnown RBP18.32■□□□□ 0.52
SNX6-209ENST00000557265 DHX57Q6P158 1386 aaKnown RBP18.31■□□□□ 0.52
SNX6-209ENST00000557265 ONECUT3O60422 494 aaPredicted RBP18.31■□□□□ 0.52
SNX6-209ENST00000557265 PRAM1Q96QH2 718 aa18.31■□□□□ 0.52
SNX6-209ENST00000557265 SBNO1A3KN83 1393 aa18.3■□□□□ 0.52
SNX6-209ENST00000557265 FAM83GA6ND36 823 aa18.3■□□□□ 0.52
SNX6-209ENST00000557265 KRT27Q7Z3Y8 459 aa18.3■□□□□ 0.52
SNX6-209ENST00000557265 USP32Q8NFA0 1604 aa18.3■□□□□ 0.52
SNX6-209ENST00000557265 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.29■□□□□ 0.52
SNX6-209ENST00000557265 FMN2Q9NZ56 1722 aa18.29■□□□□ 0.52
SNX6-209ENST00000557265 KIF1AQ12756 1690 aa18.29■□□□□ 0.52
SNX6-209ENST00000557265 PMFBP1Q8TBY8 1022 aa18.28■□□□□ 0.52
SNX6-209ENST00000557265 ARHGEF10O15013 1369 aa18.28■□□□□ 0.52
SNX6-209ENST00000557265 KNDC1Q76NI1 1749 aa18.27■□□□□ 0.52
SNX6-209ENST00000557265 POGKQ9P215 609 aa18.27■□□□□ 0.52
SNX6-209ENST00000557265 NRXN1Q9ULB1 1477 aa18.26■□□□□ 0.51
SNX6-209ENST00000557265 A0A0G2JS52 829 aa18.26■□□□□ 0.51
SNX6-209ENST00000557265 MYT1Q01538 1121 aa18.26■□□□□ 0.51
SNX6-209ENST00000557265 IFT172Q9UG01 1749 aa18.25■□□□□ 0.51
SNX6-209ENST00000557265 FAM98CQ17RN3 349 aaKnown RBP18.24■□□□□ 0.51
SNX6-209ENST00000557265 BTG4Q9NY30 223 aa18.23■□□□□ 0.51
SNX6-209ENST00000557265 HIRIP3Q9BW71 556 aaPredicted RBP18.22■□□□□ 0.51
SNX6-209ENST00000557265 ANKARQ7Z5J8 1434 aa18.22■□□□□ 0.51
SNX6-209ENST00000557265 BAG6P46379 1132 aa18.21■□□□□ 0.51
SNX6-209ENST00000557265 TRAK1Q9UPV9 953 aa18.21■□□□□ 0.51
SNX6-209ENST00000557265 PSDA5PKW4 1024 aaPredicted RBP18.2■□□□□ 0.5
SNX6-209ENST00000557265 BRWD3Q6RI45 1802 aa18.2■□□□□ 0.5
SNX6-209ENST00000557265 ACIN1Q9UKV3 1341 aaKnown RBP18.2■□□□□ 0.5
SNX6-209ENST00000557265 GPRASP1Q5JY77 1395 aa18.19■□□□□ 0.5
SNX6-209ENST00000557265 MINK1Q8N4C8 1332 aaPredicted RBP18.19■□□□□ 0.5
SNX6-209ENST00000557265 FAM182BQ5T319 152 aa18.18■□□□□ 0.5
SNX6-209ENST00000557265 NWD2Q9ULI1 1742 aa18.18■□□□□ 0.5
SNX6-209ENST00000557265 RGPD8O14715 1765 aaPredicted RBP18.17■□□□□ 0.5
SNX6-209ENST00000557265 HRCP23327 699 aa18.17■□□□□ 0.5
SNX6-209ENST00000557265 PLCH1Q4KWH8 1693 aa18.17■□□□□ 0.5
SNX6-209ENST00000557265 DLC1Q96QB1 1528 aa18.17■□□□□ 0.5
SNX6-209ENST00000557265 PRR36Q9H6K5 1346 aa18.17■□□□□ 0.5
SNX6-209ENST00000557265 PAK3O75914 559 aaPredicted RBP18.16■□□□□ 0.5
SNX6-209ENST00000557265 EN1Q05925 392 aaPredicted RBP18.16■□□□□ 0.5
SNX6-209ENST00000557265 SPATA31A5Q5VU36 1347 aa18.16■□□□□ 0.5
SNX6-209ENST00000557265 SPATA31A7Q8IWB4 1347 aa18.16■□□□□ 0.5
SNX6-209ENST00000557265 WASLO00401 505 aaPredicted RBP18.15■□□□□ 0.5
SNX6-209ENST00000557265 NGDNQ8NEJ9 315 aaKnown RBP18.15■□□□□ 0.5
SNX6-209ENST00000557265 KDM2AQ9Y2K7 1162 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 413 ms