RNA–Protein interactions for RNA: ENST00000557215.5

CLMN-208, Transcript of calmin, human

TSL 3

Gene CLMN, Length 515 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLMN-208	ENST00000557215	NEXMIF	Q5QGS0	1516 aa		14.06	□□□□□ -0.16
CLMN-208	ENST00000557215	THEMIS	Q8N1K5	641 aa	Predicted RBP	14.06	□□□□□ -0.16
CLMN-208	ENST00000557215	MYO5B	Q9ULV0	1848 aa		14.06	□□□□□ -0.16
CLMN-208	ENST00000557215	RIMS2	Q9UQ26	1411 aa		14.06	□□□□□ -0.16
CLMN-208	ENST00000557215	NKX1-1	Q15270	411 aa	Predicted RBP	14.05	□□□□□ -0.16
CLMN-208	ENST00000557215	NUTM2D	Q5VT03	806 aa	Predicted RBP	14.05	□□□□□ -0.16
CLMN-208	ENST00000557215	RYDEN	Q9NUL5	291 aa	Known RBP	14.05	□□□□□ -0.16
CLMN-208	ENST00000557215	TMEM2	Q9UHN6	1383 aa		14.05	□□□□□ -0.16
CLMN-208	ENST00000557215	PPP1R15A	O75807	674 aa	Predicted RBP	14.03	□□□□□ -0.16
CLMN-208	ENST00000557215	ZFYVE9	O95405	1425 aa		14.03	□□□□□ -0.16
CLMN-208	ENST00000557215	MYOM2	P54296	1465 aa		14.03	□□□□□ -0.16
CLMN-208	ENST00000557215	IFT172	Q9UG01	1749 aa		14.03	□□□□□ -0.16
CLMN-208	ENST00000557215	SETD1B	Q9UPS6	1966 aa	Known RBP	14.03	□□□□□ -0.16
CLMN-208	ENST00000557215	PPL	O60437	1756 aa		14.02	□□□□□ -0.16
CLMN-208	ENST00000557215	SLIT1	O75093	1534 aa		14.02	□□□□□ -0.16
CLMN-208	ENST00000557215	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	14.02	□□□□□ -0.17
CLMN-208	ENST00000557215	STAC3	Q96MF2	364 aa		14.02	□□□□□ -0.17
CLMN-208	ENST00000557215	ARHGAP23	Q9P227	1491 aa		14.01	□□□□□ -0.17
CLMN-208	ENST00000557215	ADGRF5	Q8IZF2	1346 aa		14.01	□□□□□ -0.17
CLMN-208	ENST00000557215	GTPBP6	O43824	516 aa	Predicted RBP	14.01	□□□□□ -0.17
CLMN-208	ENST00000557215	HDGF	P51858	240 aa	Known RBP	14.01	□□□□□ -0.17
CLMN-208	ENST00000557215	PIP4P2	Q8N4L2	257 aa		14.01	□□□□□ -0.17
CLMN-208	ENST00000557215	EID1	Q9Y6B2	187 aa		14.01	□□□□□ -0.17
CLMN-208	ENST00000557215	CCDC61	Q9Y6R9	512 aa		14.01	□□□□□ -0.17
CLMN-208	ENST00000557215	LMTK3	Q96Q04	1460 aa		14	□□□□□ -0.17
CLMN-208	ENST00000557215	PRAG1	Q86YV5	1406 aa		14	□□□□□ -0.17
CLMN-208	ENST00000557215	NBPF8	Q3BBV2	869 aa		14	□□□□□ -0.17
CLMN-208	ENST00000557215	TXNDC2	Q86VQ3	553 aa		14	□□□□□ -0.17
CLMN-208	ENST00000557215	NRXN1	Q9ULB1	1477 aa		13.99	□□□□□ -0.17
CLMN-208	ENST00000557215	LTK	P29376	864 aa		13.99	□□□□□ -0.17
CLMN-208	ENST00000557215	HSPA2	P54652	639 aa		13.98	□□□□□ -0.17
CLMN-208	ENST00000557215	PDAP1	Q13442	181 aa	Known RBP	13.98	□□□□□ -0.17
CLMN-208	ENST00000557215	SCAF11	Q99590	1463 aa	Known RBP	13.98	□□□□□ -0.17
CLMN-208	ENST00000557215	PIK3C2G	O75747	1445 aa		13.98	□□□□□ -0.17
CLMN-208	ENST00000557215	ANKLE2	Q86XL3	938 aa		13.97	□□□□□ -0.17
CLMN-208	ENST00000557215	ZNF579	Q8NAF0	562 aa	Known RBP	13.95	□□□□□ -0.18
CLMN-208	ENST00000557215	PLEKHG1	Q9ULL1	1385 aa		13.95	□□□□□ -0.18
CLMN-208	ENST00000557215	RALGAPB	Q86X10	1494 aa		13.94	□□□□□ -0.18
CLMN-208	ENST00000557215	CFAP70	Q5T0N1	1121 aa		13.94	□□□□□ -0.18
CLMN-208	ENST00000557215	PCDHB8	Q9UN66	801 aa		13.94	□□□□□ -0.18
CLMN-208	ENST00000557215	PCDHB13	Q9Y5F0	798 aa		13.94	□□□□□ -0.18
CLMN-208	ENST00000557215	NCKAP5L	Q9HCH0	1330 aa		13.93	□□□□□ -0.18
CLMN-208	ENST00000557215	ROCK2	O75116	1388 aa	Known RBP	13.93	□□□□□ -0.18
CLMN-208	ENST00000557215	TRPM1	Q7Z4N2	1603 aa		13.93	□□□□□ -0.18
CLMN-208	ENST00000557215	SETBP1	Q9Y6X0	1596 aa		13.92	□□□□□ -0.18
CLMN-208	ENST00000557215	C14orf93	Q9H972	538 aa	Known RBP	13.92	□□□□□ -0.18
CLMN-208	ENST00000557215	NRXN3	Q9Y4C0	1643 aa		13.91	□□□□□ -0.18
CLMN-208	ENST00000557215	NBPF1	Q3BBV0	1214 aa		13.91	□□□□□ -0.18
CLMN-208	ENST00000557215	IQGAP1	P46940	1657 aa		13.91	□□□□□ -0.18
CLMN-208	ENST00000557215	NPHP4	O75161	1426 aa	Predicted RBP	13.9	□□□□□ -0.18
CLMN-208	ENST00000557215	LAMC1	P11047	1609 aa		13.9	□□□□□ -0.18
CLMN-208	ENST00000557215	ALK	Q9UM73	1620 aa		13.9	□□□□□ -0.18
CLMN-208	ENST00000557215	POLR1A	O95602	1720 aa	Predicted RBP	13.9	□□□□□ -0.18
CLMN-208	ENST00000557215	SLC26A8	Q96RN1	970 aa		13.9	□□□□□ -0.18
CLMN-208	ENST00000557215	KIAA1210	Q9ULL0	1709 aa		13.9	□□□□□ -0.18
CLMN-208	ENST00000557215	ADAMTS13	Q76LX8	1427 aa		13.9	□□□□□ -0.19
CLMN-208	ENST00000557215	MED14	O60244	1454 aa		13.89	□□□□□ -0.19
CLMN-208	ENST00000557215	PSEN1	P49768	467 aa		13.89	□□□□□ -0.19
CLMN-208	ENST00000557215	CARD11	Q9BXL7	1154 aa		13.89	□□□□□ -0.19
CLMN-208	ENST00000557215	TMEM132E	Q6IEE7	984 aa		13.88	□□□□□ -0.19
CLMN-208	ENST00000557215	ADGRB1	O14514	1584 aa		13.88	□□□□□ -0.19
CLMN-208	ENST00000557215	GPRASP1	Q5JY77	1395 aa		13.87	□□□□□ -0.19
CLMN-208	ENST00000557215	ASXL1	Q8IXJ9	1541 aa		13.87	□□□□□ -0.19
CLMN-208	ENST00000557215	DIP2A	Q14689	1571 aa		13.87	□□□□□ -0.19
CLMN-208	ENST00000557215	MET	P08581	1390 aa		13.86	□□□□□ -0.19
CLMN-208	ENST00000557215	TBX22	Q9Y458	520 aa		13.86	□□□□□ -0.19
CLMN-208	ENST00000557215	SETD1A	O15047	1707 aa	Known RBP	13.86	□□□□□ -0.19
CLMN-208	ENST00000557215	STRC	Q7RTU9	1775 aa		13.84	□□□□□ -0.19
CLMN-208	ENST00000557215	KIF12	Q96FN5	646 aa		13.84	□□□□□ -0.19
CLMN-208	ENST00000557215	ZRANB1	Q9UGI0	708 aa		13.84	□□□□□ -0.19
CLMN-208	ENST00000557215	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.83	□□□□□ -0.2
CLMN-208	ENST00000557215	MAP3K13	O43283	966 aa		13.83	□□□□□ -0.2
CLMN-208	ENST00000557215	CD44	P16070	742 aa	Known RBP	13.83	□□□□□ -0.2
CLMN-208	ENST00000557215	IFNL1	Q8IU54	200 aa		13.83	□□□□□ -0.2
CLMN-208	ENST00000557215	STK26	Q9P289	416 aa		13.83	□□□□□ -0.2
CLMN-208	ENST00000557215	USP47	Q96K76	1375 aa		13.83	□□□□□ -0.2
CLMN-208	ENST00000557215	TRAK1	Q9UPV9	953 aa		13.82	□□□□□ -0.2
CLMN-208	ENST00000557215	LRPPRC	P42704	1394 aa	Known RBP	13.82	□□□□□ -0.2
CLMN-208	ENST00000557215	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
CLMN-208	ENST00000557215	PIK3R4	Q99570	1358 aa		13.81	□□□□□ -0.2
CLMN-208	ENST00000557215	PTPRU	Q92729	1446 aa		13.81	□□□□□ -0.2
CLMN-208	ENST00000557215	HSPA5	P11021	654 aa	Known RBP	13.8	□□□□□ -0.2
CLMN-208	ENST00000557215	EIF3A	Q14152	1382 aa	Known RBP	13.8	□□□□□ -0.2
CLMN-208	ENST00000557215	AMOTL2	Q9Y2J4	779 aa		13.79	□□□□□ -0.2
CLMN-208	ENST00000557215	ABCC11	Q96J66	1382 aa		13.79	□□□□□ -0.2
CLMN-208	ENST00000557215	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.78	□□□□□ -0.2
CLMN-208	ENST00000557215	ST20-MTHFS	A0A0A6YYL1	179 aa		13.77	□□□□□ -0.21
CLMN-208	ENST00000557215	TECPR2	O15040	1411 aa		13.77	□□□□□ -0.21
CLMN-208	ENST00000557215	DLC1	Q96QB1	1528 aa		13.77	□□□□□ -0.21
CLMN-208	ENST00000557215	KNDC1	Q76NI1	1749 aa		13.76	□□□□□ -0.21
CLMN-208	ENST00000557215	XRN1	Q8IZH2	1706 aa	Known RBP	13.76	□□□□□ -0.21
CLMN-208	ENST00000557215	CPS1	P31327	1500 aa		13.76	□□□□□ -0.21
CLMN-208	ENST00000557215	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.76	□□□□□ -0.21
CLMN-208	ENST00000557215	KCNA6	P17658	529 aa		13.76	□□□□□ -0.21
CLMN-208	ENST00000557215	PRAM1	Q96QH2	718 aa		13.76	□□□□□ -0.21
CLMN-208	ENST00000557215	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.76	□□□□□ -0.21
CLMN-208	ENST00000557215	PTCH1	Q13635	1447 aa		13.75	□□□□□ -0.21
CLMN-208	ENST00000557215	ROBO2	Q9HCK4	1378 aa		13.75	□□□□□ -0.21
CLMN-208	ENST00000557215	NBR1	Q14596	966 aa		13.75	□□□□□ -0.21
CLMN-208	ENST00000557215	POGK	Q9P215	609 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms