RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 C3orf80F5H4A9 247 aa14.95□□□□□ -0.02
GTF2A1-204ENST00000556268 RANGAP1P46060 587 aaPredicted RBP14.95□□□□□ -0.02
GTF2A1-204ENST00000556268 TTC13Q8NBP0 860 aa14.95□□□□□ -0.02
GTF2A1-204ENST00000556268 WNT2BQ93097 391 aa14.95□□□□□ -0.02
GTF2A1-204ENST00000556268 FHOD3Q2V2M9 1422 aa14.94□□□□□ -0.02
GTF2A1-204ENST00000556268 AKNAQ7Z591 1439 aa14.93□□□□□ -0.02
GTF2A1-204ENST00000556268 SLC24A1O60721 1099 aa14.93□□□□□ -0.02
GTF2A1-204ENST00000556268 FBXO41Q8TF61 875 aa14.93□□□□□ -0.02
GTF2A1-204ENST00000556268 ARID4BQ4LE39 1312 aaPredicted RBP14.92□□□□□ -0.02
GTF2A1-204ENST00000556268 NBPF26B4DH59 902 aa14.92□□□□□ -0.02
GTF2A1-204ENST00000556268 SMAPO00193 183 aa14.92□□□□□ -0.02
GTF2A1-204ENST00000556268 FAM98CQ17RN3 349 aaKnown RBP14.92□□□□□ -0.02
GTF2A1-204ENST00000556268 DENND4BO75064 1496 aaPredicted RBP14.91□□□□□ -0.02
GTF2A1-204ENST00000556268 FCHSD2O94868 740 aa14.91□□□□□ -0.02
GTF2A1-204ENST00000556268 TATDN2Q93075 761 aa14.91□□□□□ -0.02
GTF2A1-204ENST00000556268 ZFRQ96KR1 1074 aaKnown RBP14.91□□□□□ -0.02
GTF2A1-204ENST00000556268 PNMA3Q9UL41 463 aa14.91□□□□□ -0.02
GTF2A1-204ENST00000556268 FRMPD1Q5SYB0 1578 aa14.9□□□□□ -0.02
GTF2A1-204ENST00000556268 THSD4Q6ZMP0 1018 aa14.9□□□□□ -0.02
GTF2A1-204ENST00000556268 GPR37O15354 613 aa14.88□□□□□ -0.03
GTF2A1-204ENST00000556268 NUDT18Q6ZVK8 323 aa14.88□□□□□ -0.03
GTF2A1-204ENST00000556268 ANKK1Q8NFD2 765 aa14.88□□□□□ -0.03
GTF2A1-204ENST00000556268 HCSTQ9UBK5 93 aa14.88□□□□□ -0.03
GTF2A1-204ENST00000556268 FANCAO15360 1455 aa14.88□□□□□ -0.03
GTF2A1-204ENST00000556268 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.87□□□□□ -0.035e-6■■■□□ 19
GTF2A1-204ENST00000556268 BCORL1Q5H9F3 1711 aa14.87□□□□□ -0.03
GTF2A1-204ENST00000556268 TULP1O00294 542 aaPredicted RBP14.86□□□□□ -0.03
GTF2A1-204ENST00000556268 PLCH2O75038 1416 aa14.85□□□□□ -0.03
GTF2A1-204ENST00000556268 MAGI2Q86UL8 1455 aa14.85□□□□□ -0.03
GTF2A1-204ENST00000556268 GPIHBP1Q8IV16 184 aa14.85□□□□□ -0.03
GTF2A1-204ENST00000556268 LMTK3Q96Q04 1460 aa14.84□□□□□ -0.03
GTF2A1-204ENST00000556268 EFCAB5A4FU69 1503 aa14.84□□□□□ -0.03
GTF2A1-204ENST00000556268 BCAMP50895 628 aa14.84□□□□□ -0.03
GTF2A1-204ENST00000556268 PTPN5P54829 565 aa14.84□□□□□ -0.03
GTF2A1-204ENST00000556268 RICTORQ6R327 1708 aa14.83□□□□□ -0.03
GTF2A1-204ENST00000556268 HIC1Q14526 733 aa14.83□□□□□ -0.04
GTF2A1-204ENST00000556268 MADDQ8WXG6 1647 aa14.83□□□□□ -0.04
GTF2A1-204ENST00000556268 SOWAHBA6NEL2 793 aa14.82□□□□□ -0.04
GTF2A1-204ENST00000556268 EFCAB2Q5VUJ9 269 aa14.82□□□□□ -0.04
GTF2A1-204ENST00000556268 POGZQ7Z3K3 1410 aa14.82□□□□□ -0.04
GTF2A1-204ENST00000556268 SCAPERQ9BY12 1400 aa14.82□□□□□ -0.04
GTF2A1-204ENST00000556268 YEATS2Q9ULM3 1422 aa14.82□□□□□ -0.04
GTF2A1-204ENST00000556268 PCF11O94913 1555 aaKnown RBP14.81□□□□□ -0.04
GTF2A1-204ENST00000556268 ZMYM4Q5VZL5 1548 aa14.81□□□□□ -0.04
GTF2A1-204ENST00000556268 ARHGEF40Q8TER5 1519 aa14.81□□□□□ -0.04
GTF2A1-204ENST00000556268 UBTFP17480 764 aaKnown RBP14.8□□□□□ -0.04
GTF2A1-204ENST00000556268 HSPA2P54652 639 aa14.8□□□□□ -0.04
GTF2A1-204ENST00000556268 CDK11AQ9UQ88 783 aaPredicted RBP14.8□□□□□ -0.04
GTF2A1-204ENST00000556268 ADGRG1Q9Y653 693 aa14.8□□□□□ -0.04
GTF2A1-204ENST00000556268 GNPATO15228 680 aa14.79□□□□□ -0.04
GTF2A1-204ENST00000556268 FAM161AQ3B820 660 aa14.79□□□□□ -0.04
GTF2A1-204ENST00000556268 LRCH3Q96II8 777 aa14.79□□□□□ -0.04
GTF2A1-204ENST00000556268 EYA1Q99502 592 aa14.79□□□□□ -0.04
GTF2A1-204ENST00000556268 TTC37Q6PGP7 1564 aa14.78□□□□□ -0.04
GTF2A1-204ENST00000556268 FECHP22830 423 aa14.78□□□□□ -0.04
GTF2A1-204ENST00000556268 SAMD7Q7Z3H4 446 aa14.78□□□□□ -0.04
GTF2A1-204ENST00000556268 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.78□□□□□ -0.04
GTF2A1-204ENST00000556268 CFAP74Q9C0B2 1584 aa14.77□□□□□ -0.04
GTF2A1-204ENST00000556268 CDK13Q14004 1512 aaKnown RBP14.77□□□□□ -0.04
GTF2A1-204ENST00000556268 ATP10AO60312 1499 aa14.76□□□□□ -0.05
GTF2A1-204ENST00000556268 FMN1Q68DA7 1419 aa14.76□□□□□ -0.05
GTF2A1-204ENST00000556268 MLECQ14165 292 aa14.76□□□□□ -0.05
GTF2A1-204ENST00000556268 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.76□□□□□ -0.05
GTF2A1-204ENST00000556268 ATP1B4Q9UN42 357 aaPredicted RBP14.76□□□□□ -0.05
GTF2A1-204ENST00000556268 ZFYVE16Q7Z3T8 1539 aa14.76□□□□□ -0.05
GTF2A1-204ENST00000556268 HECW1Q76N89 1606 aa14.75□□□□□ -0.05
GTF2A1-204ENST00000556268 ARHGAP35Q9NRY4 1499 aa14.75□□□□□ -0.05
GTF2A1-204ENST00000556268 AFAP1Q8N556 730 aa14.74□□□□□ -0.05
GTF2A1-204ENST00000556268 SIGLEC1Q9BZZ2 1709 aa14.74□□□□□ -0.05
GTF2A1-204ENST00000556268 RIMS1Q86UR5 1692 aaKnown RBP14.74□□□□□ -0.05
GTF2A1-204ENST00000556268 LMOD2Q6P5Q4 547 aa14.73□□□□□ -0.05
GTF2A1-204ENST00000556268 RBM46Q8TBY0 533 aaKnown RBP14.73□□□□□ -0.05
GTF2A1-204ENST00000556268 HPS5Q9UPZ3 1129 aa14.73□□□□□ -0.05
GTF2A1-204ENST00000556268 CEBPAP49715 358 aaPredicted RBP14.71□□□□□ -0.05
GTF2A1-204ENST00000556268 WBP1LQ9NX94 342 aa14.71□□□□□ -0.05
GTF2A1-204ENST00000556268 TROQ12816 1431 aaPredicted RBP14.71□□□□□ -0.05
GTF2A1-204ENST00000556268 ARHGEF12Q9NZN5 1544 aa14.71□□□□□ -0.06
GTF2A1-204ENST00000556268 C9orf84Q5VXU9 1444 aa14.7□□□□□ -0.06
GTF2A1-204ENST00000556268 SWT1Q5T5J6 900 aaKnown RBP14.7□□□□□ -0.06
GTF2A1-204ENST00000556268 TSR3Q9UJK0 312 aaKnown RBP14.7□□□□□ -0.06
GTF2A1-204ENST00000556268 RNF40O75150 1001 aa14.68□□□□□ -0.06
GTF2A1-204ENST00000556268 DNAJB2P25686 324 aa14.68□□□□□ -0.06
GTF2A1-204ENST00000556268 HDGFP51858 240 aaKnown RBP14.67□□□□□ -0.06
GTF2A1-204ENST00000556268 PXYLP1Q8TE99 480 aa14.67□□□□□ -0.06
GTF2A1-204ENST00000556268 ZNF518AQ6AHZ1 1483 aa14.67□□□□□ -0.06
GTF2A1-204ENST00000556268 RCCD1A6NED2 376 aa14.66□□□□□ -0.06
GTF2A1-204ENST00000556268 OATP04181 439 aa14.66□□□□□ -0.06
GTF2A1-204ENST00000556268 METTL3Q86U44 580 aaKnown RBP14.66□□□□□ -0.06
GTF2A1-204ENST00000556268 TMEM134Q9H6X4 195 aa14.65□□□□□ -0.06
GTF2A1-204ENST00000556268 MLH3Q9UHC1 1453 aa14.64□□□□□ -0.07
GTF2A1-204ENST00000556268 SETD1BQ9UPS6 1966 aaKnown RBP14.64□□□□□ -0.07
GTF2A1-204ENST00000556268 PPP4CP60510 307 aa14.64□□□□□ -0.07
GTF2A1-204ENST00000556268 CLIP1P30622 1438 aa14.64□□□□□ -0.07
GTF2A1-204ENST00000556268 KDM5CP41229 1560 aa14.64□□□□□ -0.07
GTF2A1-204ENST00000556268 KIF14Q15058 1648 aa14.63□□□□□ -0.07
GTF2A1-204ENST00000556268 NYAP1Q6ZVC0 841 aa14.63□□□□□ -0.07
GTF2A1-204ENST00000556268 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.62□□□□□ -0.07
GTF2A1-204ENST00000556268 SLF2Q8IX21 1173 aa14.62□□□□□ -0.07
GTF2A1-204ENST00000556268 MYO5CQ9NQX4 1742 aa14.62□□□□□ -0.07
GTF2A1-204ENST00000556268 PLA2G2EQ9NZK7 142 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms