RNA–Protein interactions for RNA: ENST00000556184.5

SRSF5-212, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 1 (best)

Gene SRSF5, Length 2,443 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-212ENST00000556184 WDR7Q9Y4E6 1490 aa13.53□□□□□ -0.24
SRSF5-212ENST00000556184 ZC3H15Q8WU90 426 aaKnown RBP13.53□□□□□ -0.24
SRSF5-212ENST00000556184 VIRMAQ69YN4 1812 aaKnown RBP13.53□□□□□ -0.24
SRSF5-212ENST00000556184 KNSTRNQ9Y448 316 aa13.53□□□□□ -0.24
SRSF5-212ENST00000556184 GOLGA6L3A6NEY3 463 aa13.52□□□□□ -0.24
SRSF5-212ENST00000556184 IGHDP01880 384 aa13.52□□□□□ -0.24
SRSF5-212ENST00000556184 STAC3Q96MF2 364 aa13.52□□□□□ -0.24
SRSF5-212ENST00000556184 UPF2Q9HAU5 1272 aaKnown RBP13.52□□□□□ -0.24
SRSF5-212ENST00000556184 PLA2R1Q13018 1463 aa13.52□□□□□ -0.24
SRSF5-212ENST00000556184 CDC42BPAQ5VT25 1732 aa13.52□□□□□ -0.25
SRSF5-212ENST00000556184 TBC1D32Q96NH3 1257 aa13.52□□□□□ -0.25
SRSF5-212ENST00000556184 XRCC6P12956 609 aaKnown RBP eCLIP13.51□□□□□ -0.25
SRSF5-212ENST00000556184 SHROOM2Q13796 1616 aa13.51□□□□□ -0.25
SRSF5-212ENST00000556184 MAGI2Q86UL8 1455 aa13.51□□□□□ -0.25
SRSF5-212ENST00000556184 PMFBP1Q8TBY8 1022 aa13.51□□□□□ -0.25
SRSF5-212ENST00000556184 CLUAP1Q96AJ1 413 aa13.51□□□□□ -0.25
SRSF5-212ENST00000556184 PNNQ9H307 717 aaKnown RBP13.5□□□□□ -0.25
SRSF5-212ENST00000556184 PLXNC1O60486 1568 aa13.49□□□□□ -0.25
SRSF5-212ENST00000556184 ABCA8O94911 1581 aa13.49□□□□□ -0.25
SRSF5-212ENST00000556184 MRE11P49959 708 aa13.49□□□□□ -0.25
SRSF5-212ENST00000556184 ZMYND15Q9H091 742 aa13.49□□□□□ -0.25
SRSF5-212ENST00000556184 SEC24BO95487 1268 aa13.49□□□□□ -0.25
SRSF5-212ENST00000556184 HNRNPMP52272 730 aaKnown RBP eCLIP13.49□□□□□ -0.255e-7■■■■□ 22.2
SRSF5-212ENST00000556184 ASXL1Q8IXJ9 1541 aa13.48□□□□□ -0.25
SRSF5-212ENST00000556184 MCM4P33991 863 aa13.48□□□□□ -0.25
SRSF5-212ENST00000556184 GPBP1L1Q9HC44 474 aaPredicted RBP13.48□□□□□ -0.25
SRSF5-212ENST00000556184 SYNMO15061 1565 aa13.48□□□□□ -0.25
SRSF5-212ENST00000556184 PKNOX2Q96KN3 472 aa13.47□□□□□ -0.25
SRSF5-212ENST00000556184 TBC1D2Q9BYX2 928 aa13.47□□□□□ -0.25
SRSF5-212ENST00000556184 CADPS2Q86UW7 1296 aa13.47□□□□□ -0.25
SRSF5-212ENST00000556184 UNC13BO14795 1591 aa13.46□□□□□ -0.25
SRSF5-212ENST00000556184 RNF17Q9BXT8 1623 aaKnown RBP13.46□□□□□ -0.25
SRSF5-212ENST00000556184 BCAR3O75815 825 aa13.46□□□□□ -0.25
SRSF5-212ENST00000556184 HSP90AA1P07900 732 aaKnown RBP13.46□□□□□ -0.25
SRSF5-212ENST00000556184 SCAPERQ9BY12 1400 aa13.46□□□□□ -0.25
SRSF5-212ENST00000556184 CHMP5Q9NZZ3 219 aa13.45□□□□□ -0.26
SRSF5-212ENST00000556184 HSP90AA2PQ14568 343 aaPredicted RBP13.45□□□□□ -0.26
SRSF5-212ENST00000556184 SLKQ9H2G2 1235 aaPredicted RBP13.44□□□□□ -0.26
SRSF5-212ENST00000556184 SPINK5Q9NQ38 1064 aaPredicted RBP13.44□□□□□ -0.26
SRSF5-212ENST00000556184 MAST1Q9Y2H9 1570 aa13.44□□□□□ -0.26
SRSF5-212ENST00000556184 POLA2Q14181 598 aa13.43□□□□□ -0.26
SRSF5-212ENST00000556184 CENPJQ9HC77 1338 aaPredicted RBP13.43□□□□□ -0.26
SRSF5-212ENST00000556184 APAF1O14727 1248 aa13.43□□□□□ -0.26
SRSF5-212ENST00000556184 RGL3Q3MIN7 710 aa13.43□□□□□ -0.26
SRSF5-212ENST00000556184 DDX11L8A8MPP1 907 aa13.42□□□□□ -0.26
SRSF5-212ENST00000556184 TRAK2O60296 914 aa13.42□□□□□ -0.26
SRSF5-212ENST00000556184 NAP1L5Q96NT1 182 aaPredicted RBP13.41□□□□□ -0.26
SRSF5-212ENST00000556184 IQGAP3Q86VI3 1631 aa13.41□□□□□ -0.26
SRSF5-212ENST00000556184 RWDD1Q9H446 243 aaPredicted RBP13.41□□□□□ -0.26
SRSF5-212ENST00000556184 STK25O00506 426 aa13.4□□□□□ -0.26
SRSF5-212ENST00000556184 PTMSP20962 102 aa13.4□□□□□ -0.26
SRSF5-212ENST00000556184 MYH16Q9H6N6 1097 aa13.4□□□□□ -0.26
SRSF5-212ENST00000556184 SCAF11Q99590 1463 aaKnown RBP13.4□□□□□ -0.26
SRSF5-212ENST00000556184 KANK1Q14678 1352 aa13.4□□□□□ -0.26
SRSF5-212ENST00000556184 POLR3AO14802 1390 aaPredicted RBP13.39□□□□□ -0.27
SRSF5-212ENST00000556184 ESPNB1AK53 854 aa13.39□□□□□ -0.27
SRSF5-212ENST00000556184 TPM2P07951 284 aa13.39□□□□□ -0.27
SRSF5-212ENST00000556184 GRPEL1Q9HAV7 217 aa13.39□□□□□ -0.27
SRSF5-212ENST00000556184 WWC1Q8IX03 1113 aa13.38□□□□□ -0.27
SRSF5-212ENST00000556184 COG6Q9Y2V7 657 aa13.38□□□□□ -0.27
SRSF5-212ENST00000556184 RARSP54136 660 aaKnown RBP13.38□□□□□ -0.27
SRSF5-212ENST00000556184 PDZRN3Q9UPQ7 1066 aa13.38□□□□□ -0.27
SRSF5-212ENST00000556184 IQGAP1P46940 1657 aa13.38□□□□□ -0.27
SRSF5-212ENST00000556184 DDIT3P35638 169 aa13.37□□□□□ -0.27
SRSF5-212ENST00000556184 WDR63Q8IWG1 891 aa13.37□□□□□ -0.27
SRSF5-212ENST00000556184 SKOR2Q2VWA4 1001 aaPredicted RBP13.37□□□□□ -0.27
SRSF5-212ENST00000556184 PANK1Q8TE04 598 aa13.37□□□□□ -0.27
SRSF5-212ENST00000556184 NCOA3Q9Y6Q9 1424 aa13.36□□□□□ -0.27
SRSF5-212ENST00000556184 CANXP27824 592 aaKnown RBP13.36□□□□□ -0.27
SRSF5-212ENST00000556184 CCDC27Q2M243 656 aa13.36□□□□□ -0.27
SRSF5-212ENST00000556184 SNX21Q969T3 373 aa13.36□□□□□ -0.27
SRSF5-212ENST00000556184 PANK2Q9BZ23 570 aa13.36□□□□□ -0.27
SRSF5-212ENST00000556184 PCDHB15Q9Y5E8 787 aa13.36□□□□□ -0.27
SRSF5-212ENST00000556184 TERF1P54274 439 aa13.35□□□□□ -0.27
SRSF5-212ENST00000556184 CCDC146Q8IYE0 955 aa13.35□□□□□ -0.27
SRSF5-212ENST00000556184 ZNF692Q9BU19 519 aaPredicted RBP13.35□□□□□ -0.27
SRSF5-212ENST00000556184 C22orf23Q9BZE7 217 aa13.35□□□□□ -0.27
SRSF5-212ENST00000556184 RTEL1-TNFRSF6BF6WH68 1400 aa13.35□□□□□ -0.27
SRSF5-212ENST00000556184 FAM69CQ0P6D2 419 aa13.35□□□□□ -0.27
SRSF5-212ENST00000556184 MYO5CQ9NQX4 1742 aa13.35□□□□□ -0.27
SRSF5-212ENST00000556184 SAMD9LQ8IVG5 1584 aa13.35□□□□□ -0.27
SRSF5-212ENST00000556184 DUOX2Q9NRD8 1548 aa13.34□□□□□ -0.27
SRSF5-212ENST00000556184 CT47B1P0C2W7 299 aaPredicted RBP13.34□□□□□ -0.27
SRSF5-212ENST00000556184 PDCL3Q9H2J4 239 aa13.34□□□□□ -0.27
SRSF5-212ENST00000556184 MADDQ8WXG6 1647 aa13.34□□□□□ -0.27
SRSF5-212ENST00000556184 APBB1O00213 710 aa13.33□□□□□ -0.27
SRSF5-212ENST00000556184 SEMA3EO15041 775 aa13.33□□□□□ -0.28
SRSF5-212ENST00000556184 IGSF3O75054 1194 aa13.33□□□□□ -0.28
SRSF5-212ENST00000556184 PREX2Q70Z35 1606 aa13.32□□□□□ -0.28
SRSF5-212ENST00000556184 RBM25P49756 843 aaKnown RBP13.32□□□□□ -0.28
SRSF5-212ENST00000556184 HDAC1Q13547 482 aaPredicted RBP13.32□□□□□ -0.28
SRSF5-212ENST00000556184 SMC5Q8IY18 1101 aa13.32□□□□□ -0.28
SRSF5-212ENST00000556184 HSCBQ8IWL3 235 aa13.31□□□□□ -0.28
SRSF5-212ENST00000556184 RUNDC1Q96C34 613 aa13.31□□□□□ -0.28
SRSF5-212ENST00000556184 CCDC9Q9Y3X0 531 aaKnown RBP13.31□□□□□ -0.28
SRSF5-212ENST00000556184 TTC37Q6PGP7 1564 aa13.31□□□□□ -0.28
SRSF5-212ENST00000556184 NEURL4Q96JN8 1562 aa13.31□□□□□ -0.28
SRSF5-212ENST00000556184 TRIM44Q96DX7 344 aaPredicted RBP13.31□□□□□ -0.28
SRSF5-212ENST00000556184 MYOM1P52179 1685 aa13.3□□□□□ -0.28
SRSF5-212ENST00000556184 GZF1Q9H116 711 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms