RNA–Protein interactions for RNA: ENST00000556175.1

SDR39U1-216, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 775 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-216ENST00000556175 ABCC11Q96J66 1382 aa31.91■■■□□ 2.7
SDR39U1-216ENST00000556175 ORAI2Q96SN7 254 aa31.9■■■□□ 2.7
SDR39U1-216ENST00000556175 STK26Q9P289 416 aa31.9■■■□□ 2.7
SDR39U1-216ENST00000556175 MYOM2P54296 1465 aa31.89■■■□□ 2.7
SDR39U1-216ENST00000556175 SOS2Q07890 1332 aaPredicted RBP31.87■■■□□ 2.69
SDR39U1-216ENST00000556175 NRXN1Q9ULB1 1477 aa31.85■■■□□ 2.69
SDR39U1-216ENST00000556175 YTHDC2Q9H6S0 1430 aaKnown RBP31.85■■■□□ 2.69
SDR39U1-216ENST00000556175 TMEM132EQ6IEE7 984 aa31.84■■■□□ 2.69
SDR39U1-216ENST00000556175 WAPLQ7Z5K2 1190 aa31.82■■■□□ 2.68
SDR39U1-216ENST00000556175 C14orf93Q9H972 538 aaKnown RBP31.82■■■□□ 2.68
SDR39U1-216ENST00000556175 AFF2P51816 1311 aa31.81■■■□□ 2.68
SDR39U1-216ENST00000556175 NPHP3Q7Z494 1330 aa31.81■■■□□ 2.68
SDR39U1-216ENST00000556175 ESCO1Q5FWF5 840 aa31.81■■■□□ 2.68
SDR39U1-216ENST00000556175 RXRBP28702 533 aa31.79■■■□□ 2.68
SDR39U1-216ENST00000556175 SIRT1Q96EB6 747 aa31.79■■■□□ 2.68
SDR39U1-216ENST00000556175 C8orf37Q96NL8 207 aa31.78■■■□□ 2.68
SDR39U1-216ENST00000556175 DHX57Q6P158 1386 aaKnown RBP31.78■■■□□ 2.68
SDR39U1-216ENST00000556175 PLEKHH1Q9ULM0 1364 aa31.78■■■□□ 2.68
SDR39U1-216ENST00000556175 HRCP23327 699 aa31.76■■■□□ 2.67
SDR39U1-216ENST00000556175 CDK12Q9NYV4 1490 aaPredicted RBP31.75■■■□□ 2.67
SDR39U1-216ENST00000556175 FMN2Q9NZ56 1722 aa31.75■■■□□ 2.67
SDR39U1-216ENST00000556175 COL22A1Q8NFW1 1626 aaPredicted RBP31.75■■■□□ 2.67
SDR39U1-216ENST00000556175 CFAP70Q5T0N1 1121 aa31.74■■■□□ 2.67
SDR39U1-216ENST00000556175 PXDNQ92626 1479 aa31.72■■■□□ 2.67
SDR39U1-216ENST00000556175 ADAMTS2O95450 1211 aa31.71■■■□□ 2.67
SDR39U1-216ENST00000556175 KIF1AQ12756 1690 aa31.7■■■□□ 2.67
SDR39U1-216ENST00000556175 NGLY1Q96IV0 654 aa31.7■■■□□ 2.67
SDR39U1-216ENST00000556175 NUTM2FA1L443 756 aa31.69■■■□□ 2.66
SDR39U1-216ENST00000556175 FOXO3O43524 673 aa31.69■■■□□ 2.66
SDR39U1-216ENST00000556175 DLC1Q96QB1 1528 aa31.68■■■□□ 2.66
SDR39U1-216ENST00000556175 RBM6P78332 1123 aaKnown RBP31.65■■■□□ 2.66
SDR39U1-216ENST00000556175 STAC3Q96MF2 364 aa31.65■■■□□ 2.66
SDR39U1-216ENST00000556175 QTRT2Q9H974 415 aaKnown RBP31.65■■■□□ 2.66
SDR39U1-216ENST00000556175 PRAM1Q96QH2 718 aa31.63■■■□□ 2.65
SDR39U1-216ENST00000556175 ADGRB1O14514 1584 aa31.62■■■□□ 2.65
SDR39U1-216ENST00000556175 XPCQ01831 940 aaPredicted RBP31.62■■■□□ 2.65
SDR39U1-216ENST00000556175 POGKQ9P215 609 aa31.61■■■□□ 2.65
SDR39U1-216ENST00000556175 DCAF11Q8TEB1 546 aa31.6■■■□□ 2.65
SDR39U1-216ENST00000556175 USP21Q9UK80 565 aa31.59■■■□□ 2.65
SDR39U1-216ENST00000556175 FNBP4Q8N3X1 1017 aaPredicted RBP31.58■■■□□ 2.65
SDR39U1-216ENST00000556175 SAFB2Q14151 953 aaKnown RBP eCLIP31.57■■■□□ 2.64
SDR39U1-216ENST00000556175 KDM2AQ9Y2K7 1162 aa31.57■■■□□ 2.64
SDR39U1-216ENST00000556175 RGS12O14924 1447 aa31.57■■■□□ 2.64
SDR39U1-216ENST00000556175 ADGRB2O60241 1585 aa31.56■■■□□ 2.64
SDR39U1-216ENST00000556175 UPF1Q92900 1129 aaKnown RBP eCLIP31.56■■■□□ 2.64
SDR39U1-216ENST00000556175 TRPC5Q9UL62 973 aaPredicted RBP31.56■■■□□ 2.64
SDR39U1-216ENST00000556175 PHF8Q9UPP1 1060 aa31.56■■■□□ 2.64
SDR39U1-216ENST00000556175 MARF1Q9Y4F3 1742 aaKnown RBP31.55■■■□□ 2.64
SDR39U1-216ENST00000556175 ANKARQ7Z5J8 1434 aa31.55■■■□□ 2.64
SDR39U1-216ENST00000556175 SPATA31A3Q5VYP0 1347 aa31.54■■■□□ 2.64
SDR39U1-216ENST00000556175 RGPD8O14715 1765 aaPredicted RBP31.53■■■□□ 2.64
SDR39U1-216ENST00000556175 PSME1Q06323 249 aa31.53■■■□□ 2.64
SDR39U1-216ENST00000556175 KRT28Q7Z3Y7 464 aa31.53■■■□□ 2.64
SDR39U1-216ENST00000556175 TRAK1Q9UPV9 953 aa31.52■■■□□ 2.64
SDR39U1-216ENST00000556175 EIF3AQ14152 1382 aaKnown RBP31.51■■■□□ 2.63
SDR39U1-216ENST00000556175 ATRNO75882 1429 aa31.49■■■□□ 2.63
SDR39U1-216ENST00000556175 TNS3Q68CZ2 1445 aa31.49■■■□□ 2.63
SDR39U1-216ENST00000556175 SBNO1A3KN83 1393 aa31.46■■■□□ 2.63
SDR39U1-216ENST00000556175 USP32Q8NFA0 1604 aa31.46■■■□□ 2.63
SDR39U1-216ENST00000556175 BCL9LQ86UU0 1499 aa31.44■■■□□ 2.62
SDR39U1-216ENST00000556175 ARHGEF10O15013 1369 aa31.43■■■□□ 2.62
SDR39U1-216ENST00000556175 HIRIP3Q9BW71 556 aaPredicted RBP31.42■■■□□ 2.62
SDR39U1-216ENST00000556175 TULP4Q9NRJ4 1543 aa31.42■■■□□ 2.62
SDR39U1-216ENST00000556175 MINK1Q8N4C8 1332 aaPredicted RBP31.42■■■□□ 2.62
SDR39U1-216ENST00000556175 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.41■■■□□ 2.62
SDR39U1-216ENST00000556175 HAP1P54257 671 aaPredicted RBP31.41■■■□□ 2.62
SDR39U1-216ENST00000556175 ARHGEF28Q8N1W1 1705 aaKnown RBP31.39■■■□□ 2.62
SDR39U1-216ENST00000556175 PMFBP1Q8TBY8 1022 aa31.39■■■□□ 2.62
SDR39U1-216ENST00000556175 ATAD2Q6PL18 1390 aa31.39■■■□□ 2.62
SDR39U1-216ENST00000556175 WASLO00401 505 aaPredicted RBP31.38■■■□□ 2.61
SDR39U1-216ENST00000556175 SLIT2O94813 1529 aa31.38■■■□□ 2.61
SDR39U1-216ENST00000556175 KIAA1210Q9ULL0 1709 aa31.36■■■□□ 2.61
SDR39U1-216ENST00000556175 GPRASP1Q5JY77 1395 aa31.36■■■□□ 2.61
SDR39U1-216ENST00000556175 LMOD2Q6P5Q4 547 aa31.36■■■□□ 2.61
SDR39U1-216ENST00000556175 UNC5CLQ8IV45 518 aa31.35■■■□□ 2.61
SDR39U1-216ENST00000556175 GJD4Q96KN9 370 aaPredicted RBP31.34■■■□□ 2.61
SDR39U1-216ENST00000556175 ABCA3Q99758 1704 aa31.33■■■□□ 2.61
SDR39U1-216ENST00000556175 PRR36Q9H6K5 1346 aa31.32■■■□□ 2.6
SDR39U1-216ENST00000556175 TRPM3Q9HCF6 1732 aaPredicted RBP31.31■■■□□ 2.6
SDR39U1-216ENST00000556175 ITSN1Q15811 1721 aa31.3■■■□□ 2.6
SDR39U1-216ENST00000556175 CABLES1Q8TDN4 633 aa31.3■■■□□ 2.6
SDR39U1-216ENST00000556175 NWD2Q9ULI1 1742 aa31.28■■■□□ 2.6
SDR39U1-216ENST00000556175 RALGAPBQ86X10 1494 aa31.27■■■□□ 2.6
SDR39U1-216ENST00000556175 NGDNQ8NEJ9 315 aaKnown RBP31.27■■■□□ 2.6
SDR39U1-216ENST00000556175 PLCH1Q4KWH8 1693 aa31.27■■■□□ 2.6
SDR39U1-216ENST00000556175 ALS2Q96Q42 1657 aa31.26■■■□□ 2.6
SDR39U1-216ENST00000556175 PLEKHG5O94827 1062 aa31.26■■■□□ 2.59
SDR39U1-216ENST00000556175 ATP7BP35670 1465 aa31.26■■■□□ 2.59
SDR39U1-216ENST00000556175 GLI3P10071 1580 aa31.24■■■□□ 2.59
SDR39U1-216ENST00000556175 NUDT16Q96DE0 195 aaKnown RBP31.22■■■□□ 2.59
SDR39U1-216ENST00000556175 VPS72Q15906 364 aa31.21■■■□□ 2.59
SDR39U1-216ENST00000556175 CDK19Q9BWU1 502 aa31.19■■■□□ 2.58
SDR39U1-216ENST00000556175 PAK3O75914 559 aaPredicted RBP31.17■■■□□ 2.58
SDR39U1-216ENST00000556175 CCDC125Q86Z20 511 aa31.17■■■□□ 2.58
SDR39U1-216ENST00000556175 FAM83GA6ND36 823 aa31.16■■■□□ 2.58
SDR39U1-216ENST00000556175 NBPF1Q3BBV0 1214 aa31.16■■■□□ 2.58
SDR39U1-216ENST00000556175 TOPAZ1Q8N9V7 1692 aa31.16■■■□□ 2.58
SDR39U1-216ENST00000556175 COL14A1Q05707 1796 aaKnown RBP31.15■■■□□ 2.58
SDR39U1-216ENST00000556175 CCDC9Q9Y3X0 531 aaKnown RBP31.15■■■□□ 2.58
SDR39U1-216ENST00000556175 EP400Q96L91 3159 aa31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms