RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 KNDC1Q76NI1 1749 aa28.01■■■□□ 2.07
CDKN3-209ENST00000556102 PIK3C2GO75747 1445 aa28■■■□□ 2.07
CDKN3-209ENST00000556102 LRPPRCP42704 1394 aaKnown RBP27.99■■■□□ 2.07
CDKN3-209ENST00000556102 CDK12Q9NYV4 1490 aaPredicted RBP27.99■■■□□ 2.07
CDKN3-209ENST00000556102 C8orf37Q96NL8 207 aa27.98■■■□□ 2.07
CDKN3-209ENST00000556102 STK26Q9P289 416 aa27.97■■■□□ 2.07
CDKN3-209ENST00000556102 ABCC11Q96J66 1382 aa27.97■■■□□ 2.07
CDKN3-209ENST00000556102 ESCO1Q5FWF5 840 aa27.93■■■□□ 2.06
CDKN3-209ENST00000556102 TMEM132EQ6IEE7 984 aa27.93■■■□□ 2.06
CDKN3-209ENST00000556102 WAPLQ7Z5K2 1190 aa27.93■■■□□ 2.06
CDKN3-209ENST00000556102 NPHP3Q7Z494 1330 aa27.92■■■□□ 2.06
CDKN3-209ENST00000556102 COL22A1Q8NFW1 1626 aaPredicted RBP27.92■■■□□ 2.06
CDKN3-209ENST00000556102 ADAMTS2O95450 1211 aa27.92■■■□□ 2.06
CDKN3-209ENST00000556102 YTHDC2Q9H6S0 1430 aaKnown RBP27.92■■■□□ 2.06
CDKN3-209ENST00000556102 PLEKHH1Q9ULM0 1364 aa27.9■■■□□ 2.06
CDKN3-209ENST00000556102 UPF1Q92900 1129 aaKnown RBP eCLIP27.9■■■□□ 2.06
CDKN3-209ENST00000556102 NGLY1Q96IV0 654 aa27.89■■■□□ 2.06
CDKN3-209ENST00000556102 QTRT2Q9H974 415 aaKnown RBP27.89■■■□□ 2.06
CDKN3-209ENST00000556102 MYOM2P54296 1465 aa27.89■■■□□ 2.05
CDKN3-209ENST00000556102 PXDNQ92626 1479 aa27.89■■■□□ 2.05
CDKN3-209ENST00000556102 NRXN1Q9ULB1 1477 aa27.89■■■□□ 2.05
CDKN3-209ENST00000556102 RBM6P78332 1123 aaKnown RBP27.88■■■□□ 2.05
CDKN3-209ENST00000556102 FMN2Q9NZ56 1722 aa27.88■■■□□ 2.05
CDKN3-209ENST00000556102 RAB3GAP2Q9H2M9 1393 aa27.87■■■□□ 2.05
CDKN3-209ENST00000556102 C14orf93Q9H972 538 aaKnown RBP27.87■■■□□ 2.05
CDKN3-209ENST00000556102 RGS12O14924 1447 aa27.85■■■□□ 2.05
CDKN3-209ENST00000556102 NUTM2FA1L443 756 aa27.85■■■□□ 2.05
CDKN3-209ENST00000556102 SIRT1Q96EB6 747 aa27.85■■■□□ 2.05
CDKN3-209ENST00000556102 FOXO3O43524 673 aa27.84■■■□□ 2.05
CDKN3-209ENST00000556102 KIF1AQ12756 1690 aa27.82■■■□□ 2.04
CDKN3-209ENST00000556102 XPCQ01831 940 aaPredicted RBP27.81■■■□□ 2.04
CDKN3-209ENST00000556102 CFAP70Q5T0N1 1121 aa27.81■■■□□ 2.04
CDKN3-209ENST00000556102 USP21Q9UK80 565 aa27.81■■■□□ 2.04
CDKN3-209ENST00000556102 DHX57Q6P158 1386 aaKnown RBP27.81■■■□□ 2.04
CDKN3-209ENST00000556102 MARF1Q9Y4F3 1742 aaKnown RBP27.81■■■□□ 2.04
CDKN3-209ENST00000556102 FNBP4Q8N3X1 1017 aaPredicted RBP27.8■■■□□ 2.04
CDKN3-209ENST00000556102 TRPC5Q9UL62 973 aaPredicted RBP27.77■■■□□ 2.04
CDKN3-209ENST00000556102 RGPD8O14715 1765 aaPredicted RBP27.76■■■□□ 2.03
CDKN3-209ENST00000556102 ATRNO75882 1429 aa27.75■■■□□ 2.03
CDKN3-209ENST00000556102 DLC1Q96QB1 1528 aa27.74■■■□□ 2.03
CDKN3-209ENST00000556102 SPATA31A3Q5VYP0 1347 aa27.71■■■□□ 2.03
CDKN3-209ENST00000556102 PRAM1Q96QH2 718 aa27.71■■■□□ 2.03
CDKN3-209ENST00000556102 BCL9LQ86UU0 1499 aa27.7■■■□□ 2.02
CDKN3-209ENST00000556102 ADGRB1O14514 1584 aa27.69■■■□□ 2.02
CDKN3-209ENST00000556102 SAFB2Q14151 953 aaKnown RBP eCLIP27.69■■■□□ 2.02
CDKN3-209ENST00000556102 KRT28Q7Z3Y7 464 aa27.69■■■□□ 2.02
CDKN3-209ENST00000556102 PHF8Q9UPP1 1060 aa27.69■■■□□ 2.02
CDKN3-209ENST00000556102 POGKQ9P215 609 aa27.67■■■□□ 2.02
CDKN3-209ENST00000556102 ADGRB2O60241 1585 aa27.67■■■□□ 2.02
CDKN3-209ENST00000556102 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.67■■■□□ 2.02
CDKN3-209ENST00000556102 TNS3Q68CZ2 1445 aa27.66■■■□□ 2.02
CDKN3-209ENST00000556102 ATAD2Q6PL18 1390 aa27.65■■■□□ 2.02
CDKN3-209ENST00000556102 HRCP23327 699 aa27.65■■■□□ 2.02
CDKN3-209ENST00000556102 USP32Q8NFA0 1604 aa27.64■■■□□ 2.02
CDKN3-209ENST00000556102 ANKARQ7Z5J8 1434 aa27.64■■■□□ 2.02
CDKN3-209ENST00000556102 PSME1Q06323 249 aa27.63■■■□□ 2.01
CDKN3-209ENST00000556102 SLIT2O94813 1529 aa27.62■■■□□ 2.01
CDKN3-209ENST00000556102 SBNO1A3KN83 1393 aa27.61■■■□□ 2.01
CDKN3-209ENST00000556102 DCAF11Q8TEB1 546 aa27.61■■■□□ 2.01
CDKN3-209ENST00000556102 STAC3Q96MF2 364 aa27.61■■■□□ 2.01
CDKN3-209ENST00000556102 TRAK1Q9UPV9 953 aa27.61■■■□□ 2.01
CDKN3-209ENST00000556102 KDM2AQ9Y2K7 1162 aa27.61■■■□□ 2.01
CDKN3-209ENST00000556102 GJD4Q96KN9 370 aaPredicted RBP27.59■■■□□ 2.01
CDKN3-209ENST00000556102 UNC5CLQ8IV45 518 aa27.58■■■□□ 2.01
CDKN3-209ENST00000556102 ABCA3Q99758 1704 aa27.58■■■□□ 2.01
CDKN3-209ENST00000556102 ARHGEF10O15013 1369 aa27.57■■■□□ 2
CDKN3-209ENST00000556102 HAP1P54257 671 aaPredicted RBP27.56■■■□□ 2
CDKN3-209ENST00000556102 EIF3AQ14152 1382 aaKnown RBP27.56■■■□□ 2
CDKN3-209ENST00000556102 PMFBP1Q8TBY8 1022 aa27.55■■■□□ 2
CDKN3-209ENST00000556102 HIRIP3Q9BW71 556 aaPredicted RBP27.55■■■□□ 2
CDKN3-209ENST00000556102 GLI3P10071 1580 aa27.54■■■□□ 2
CDKN3-209ENST00000556102 MINK1Q8N4C8 1332 aaPredicted RBP27.54■■■□□ 2
CDKN3-209ENST00000556102 TULP4Q9NRJ4 1543 aa27.53■■■□□ 2
CDKN3-209ENST00000556102 RALGAPBQ86X10 1494 aa27.53■■■□□ 2
CDKN3-209ENST00000556102 LMOD2Q6P5Q4 547 aa27.53■■■□□ 2
CDKN3-209ENST00000556102 CABLES1Q8TDN4 633 aa27.53■■■□□ 2
CDKN3-209ENST00000556102 TRPM3Q9HCF6 1732 aaPredicted RBP27.53■■■□□ 2
CDKN3-209ENST00000556102 NWD2Q9ULI1 1742 aa27.52■■■□□ 2
CDKN3-209ENST00000556102 PLCH1Q4KWH8 1693 aa27.52■■■□□ 2
CDKN3-209ENST00000556102 ARHGEF28Q8N1W1 1705 aaKnown RBP27.51■■□□□ 1.99
CDKN3-209ENST00000556102 EP400Q96L91 3159 aa27.51■■□□□ 1.99
CDKN3-209ENST00000556102 PRR36Q9H6K5 1346 aa27.5■■□□□ 1.99
CDKN3-209ENST00000556102 WASLO00401 505 aaPredicted RBP27.49■■□□□ 1.99
CDKN3-209ENST00000556102 PLEKHG5O94827 1062 aa27.48■■□□□ 1.99
CDKN3-209ENST00000556102 ALS2Q96Q42 1657 aa27.48■■□□□ 1.99
CDKN3-209ENST00000556102 GPRASP1Q5JY77 1395 aa27.48■■□□□ 1.99
CDKN3-209ENST00000556102 VPS72Q15906 364 aa27.45■■□□□ 1.98
CDKN3-209ENST00000556102 ITSN1Q15811 1721 aa27.44■■□□□ 1.98
CDKN3-209ENST00000556102 BRWD3Q6RI45 1802 aa27.44■■□□□ 1.98
CDKN3-209ENST00000556102 CCDC125Q86Z20 511 aa27.44■■□□□ 1.98
CDKN3-209ENST00000556102 KIAA1210Q9ULL0 1709 aa27.43■■□□□ 1.98
CDKN3-209ENST00000556102 ATP7BP35670 1465 aa27.4■■□□□ 1.98
CDKN3-209ENST00000556102 FAM83GA6ND36 823 aa27.4■■□□□ 1.98
CDKN3-209ENST00000556102 NGDNQ8NEJ9 315 aaKnown RBP27.4■■□□□ 1.98
CDKN3-209ENST00000556102 NRAPQ86VF7 1730 aa27.39■■□□□ 1.98
CDKN3-209ENST00000556102 CCDC9Q9Y3X0 531 aaKnown RBP27.39■■□□□ 1.98
CDKN3-209ENST00000556102 CRYBG1Q9Y4K1 1723 aa27.38■■□□□ 1.97
CDKN3-209ENST00000556102 COL14A1Q05707 1796 aaKnown RBP27.37■■□□□ 1.97
CDKN3-209ENST00000556102 SEPT12Q8IYM1 358 aa27.37■■□□□ 1.97
CDKN3-209ENST00000556102 NUDT16Q96DE0 195 aaKnown RBP27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms