RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 YTHDC2Q9H6S0 1430 aaKnown RBP25.27■■□□□ 1.64
GPHN-211ENST00000556020 MYOM2P54296 1465 aa25.27■■□□□ 1.64
GPHN-211ENST00000556020 CDC42BPGQ6DT37 1551 aa25.27■■□□□ 1.64
GPHN-211ENST00000556020 PLEKHH1Q9ULM0 1364 aa25.26■■□□□ 1.63
GPHN-211ENST00000556020 CFAP70Q5T0N1 1121 aa25.25■■□□□ 1.63
GPHN-211ENST00000556020 ABCC11Q96J66 1382 aa25.25■■□□□ 1.63
GPHN-211ENST00000556020 LAMC1P11047 1609 aa25.25■■□□□ 1.63
GPHN-211ENST00000556020 NRXN1Q9ULB1 1477 aa25.24■■□□□ 1.63
GPHN-211ENST00000556020 C14orf93Q9H972 538 aaKnown RBP25.24■■□□□ 1.63
GPHN-211ENST00000556020 NUTM2FA1L443 756 aa25.23■■□□□ 1.63
GPHN-211ENST00000556020 ESCO1Q5FWF5 840 aa25.22■■□□□ 1.63
GPHN-211ENST00000556020 PNPLA6Q8IY17 1366 aa25.21■■□□□ 1.63
GPHN-211ENST00000556020 HRCP23327 699 aa25.21■■□□□ 1.63
GPHN-211ENST00000556020 KDM2AQ9Y2K7 1162 aa25.2■■□□□ 1.62
GPHN-211ENST00000556020 DHX57Q6P158 1386 aaKnown RBP25.19■■□□□ 1.62
GPHN-211ENST00000556020 ZNF772Q68DY9 489 aaPredicted RBP25.17■■□□□ 1.62
GPHN-211ENST00000556020 DCAF11Q8TEB1 546 aa25.17■■□□□ 1.62
GPHN-211ENST00000556020 FMN2Q9NZ56 1722 aa25.17■■□□□ 1.62
GPHN-211ENST00000556020 SOS2Q07890 1332 aaPredicted RBP25.16■■□□□ 1.62
GPHN-211ENST00000556020 SAFB2Q14151 953 aaKnown RBP eCLIP25.16■■□□□ 1.62
GPHN-211ENST00000556020 XPCQ01831 940 aaPredicted RBP25.14■■□□□ 1.62
GPHN-211ENST00000556020 C8orf37Q96NL8 207 aa25.13■■□□□ 1.61
GPHN-211ENST00000556020 PRAM1Q96QH2 718 aa25.13■■□□□ 1.61
GPHN-211ENST00000556020 AFF2P51816 1311 aa25.12■■□□□ 1.61
GPHN-211ENST00000556020 NPHP3Q7Z494 1330 aa25.12■■□□□ 1.61
GPHN-211ENST00000556020 FOXO3O43524 673 aa25.12■■□□□ 1.61
GPHN-211ENST00000556020 ADAMTS2O95450 1211 aa25.12■■□□□ 1.61
GPHN-211ENST00000556020 SIRT1Q96EB6 747 aa25.11■■□□□ 1.61
GPHN-211ENST00000556020 POGKQ9P215 609 aa25.11■■□□□ 1.61
GPHN-211ENST00000556020 RGPD8O14715 1765 aaPredicted RBP25.1■■□□□ 1.61
GPHN-211ENST00000556020 ADGRB1O14514 1584 aa25.1■■□□□ 1.61
GPHN-211ENST00000556020 PXDNQ92626 1479 aa25.09■■□□□ 1.61
GPHN-211ENST00000556020 TRAK1Q9UPV9 953 aa25.08■■□□□ 1.61
GPHN-211ENST00000556020 DLC1Q96QB1 1528 aa25.07■■□□□ 1.6
GPHN-211ENST00000556020 KIF1AQ12756 1690 aa25.07■■□□□ 1.6
GPHN-211ENST00000556020 COL22A1Q8NFW1 1626 aaPredicted RBP25.05■■□□□ 1.6
GPHN-211ENST00000556020 NGLY1Q96IV0 654 aa25.05■■□□□ 1.6
GPHN-211ENST00000556020 RXRBP28702 533 aa25.04■■□□□ 1.6
GPHN-211ENST00000556020 HIRIP3Q9BW71 556 aaPredicted RBP25.02■■□□□ 1.6
GPHN-211ENST00000556020 STAC3Q96MF2 364 aa25.01■■□□□ 1.59
GPHN-211ENST00000556020 PHF8Q9UPP1 1060 aa25■■□□□ 1.59
GPHN-211ENST00000556020 MINK1Q8N4C8 1332 aaPredicted RBP25■■□□□ 1.59
GPHN-211ENST00000556020 KRT28Q7Z3Y7 464 aa24.99■■□□□ 1.59
GPHN-211ENST00000556020 QTRT2Q9H974 415 aaKnown RBP24.99■■□□□ 1.59
GPHN-211ENST00000556020 USP32Q8NFA0 1604 aa24.98■■□□□ 1.59
GPHN-211ENST00000556020 ADGRB2O60241 1585 aa24.98■■□□□ 1.59
GPHN-211ENST00000556020 ARHGEF28Q8N1W1 1705 aaKnown RBP24.96■■□□□ 1.59
GPHN-211ENST00000556020 MARF1Q9Y4F3 1742 aaKnown RBP24.96■■□□□ 1.59
GPHN-211ENST00000556020 PLEKHG5O94827 1062 aa24.96■■□□□ 1.59
GPHN-211ENST00000556020 PMFBP1Q8TBY8 1022 aa24.95■■□□□ 1.58
GPHN-211ENST00000556020 USP21Q9UK80 565 aa24.95■■□□□ 1.58
GPHN-211ENST00000556020 SPATA31A3Q5VYP0 1347 aa24.94■■□□□ 1.58
GPHN-211ENST00000556020 ANKARQ7Z5J8 1434 aa24.93■■□□□ 1.58
GPHN-211ENST00000556020 RBM6P78332 1123 aaKnown RBP24.92■■□□□ 1.58
GPHN-211ENST00000556020 PSME1Q06323 249 aa24.92■■□□□ 1.58
GPHN-211ENST00000556020 LMOD2Q6P5Q4 547 aa24.92■■□□□ 1.58
GPHN-211ENST00000556020 CDK12Q9NYV4 1490 aaPredicted RBP24.91■■□□□ 1.58
GPHN-211ENST00000556020 KIAA1210Q9ULL0 1709 aa24.9■■□□□ 1.58
GPHN-211ENST00000556020 TNS3Q68CZ2 1445 aa24.9■■□□□ 1.58
GPHN-211ENST00000556020 RGS12O14924 1447 aa24.89■■□□□ 1.58
GPHN-211ENST00000556020 WASLO00401 505 aaPredicted RBP24.89■■□□□ 1.58
GPHN-211ENST00000556020 HAP1P54257 671 aaPredicted RBP24.89■■□□□ 1.58
GPHN-211ENST00000556020 TULP4Q9NRJ4 1543 aa24.89■■□□□ 1.57
GPHN-211ENST00000556020 EIF3AQ14152 1382 aaKnown RBP24.89■■□□□ 1.57
GPHN-211ENST00000556020 PRR36Q9H6K5 1346 aa24.88■■□□□ 1.57
GPHN-211ENST00000556020 FNBP4Q8N3X1 1017 aaPredicted RBP24.88■■□□□ 1.57
GPHN-211ENST00000556020 TRPC5Q9UL62 973 aaPredicted RBP24.87■■□□□ 1.57
GPHN-211ENST00000556020 NBPF1Q3BBV0 1214 aa24.86■■□□□ 1.57
GPHN-211ENST00000556020 CABLES1Q8TDN4 633 aa24.86■■□□□ 1.57
GPHN-211ENST00000556020 SBNO1A3KN83 1393 aa24.85■■□□□ 1.57
GPHN-211ENST00000556020 SIN3AQ96ST3 1273 aa24.85■■□□□ 1.57
GPHN-211ENST00000556020 UPF1Q92900 1129 aaKnown RBP eCLIP24.84■■□□□ 1.571e-6■■■■■ 27.9
GPHN-211ENST00000556020 ATRNO75882 1429 aa24.83■■□□□ 1.57
GPHN-211ENST00000556020 BCL9LQ86UU0 1499 aa24.83■■□□□ 1.56
GPHN-211ENST00000556020 GPRASP1Q5JY77 1395 aa24.82■■□□□ 1.56
GPHN-211ENST00000556020 NEUROD1Q13562 356 aa24.82■■□□□ 1.56
GPHN-211ENST00000556020 ITSN1Q15811 1721 aa24.82■■□□□ 1.56
GPHN-211ENST00000556020 ABCA3Q99758 1704 aa24.82■■□□□ 1.56
GPHN-211ENST00000556020 TRPM3Q9HCF6 1732 aaPredicted RBP24.82■■□□□ 1.56
GPHN-211ENST00000556020 ARHGEF10O15013 1369 aa24.81■■□□□ 1.56
GPHN-211ENST00000556020 NGDNQ8NEJ9 315 aaKnown RBP24.81■■□□□ 1.56
GPHN-211ENST00000556020 L3MBTL2Q969R5 705 aa24.81■■□□□ 1.56
GPHN-211ENST00000556020 NUDT16Q96DE0 195 aaKnown RBP24.79■■□□□ 1.56
GPHN-211ENST00000556020 CDK19Q9BWU1 502 aa24.79■■□□□ 1.56
GPHN-211ENST00000556020 ATP7BP35670 1465 aa24.78■■□□□ 1.56
GPHN-211ENST00000556020 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.78■■□□□ 1.56
GPHN-211ENST00000556020 PAK3O75914 559 aaPredicted RBP24.77■■□□□ 1.56
GPHN-211ENST00000556020 PLCH1Q4KWH8 1693 aa24.76■■□□□ 1.55
GPHN-211ENST00000556020 ALS2Q96Q42 1657 aa24.76■■□□□ 1.55
GPHN-211ENST00000556020 SLIT2O94813 1529 aa24.76■■□□□ 1.55
GPHN-211ENST00000556020 UNC5CLQ8IV45 518 aa24.75■■□□□ 1.55
GPHN-211ENST00000556020 GJD4Q96KN9 370 aaPredicted RBP24.74■■□□□ 1.55
GPHN-211ENST00000556020 TOPAZ1Q8N9V7 1692 aa24.72■■□□□ 1.55
GPHN-211ENST00000556020 QRICH2Q9H0J4 1663 aa24.72■■□□□ 1.55
GPHN-211ENST00000556020 CENPJQ9HC77 1338 aaPredicted RBP24.72■■□□□ 1.55
GPHN-211ENST00000556020 TRPM1Q7Z4N2 1603 aa24.71■■□□□ 1.55
GPHN-211ENST00000556020 GLI3P10071 1580 aa24.7■■□□□ 1.54
GPHN-211ENST00000556020 RALGAPBQ86X10 1494 aa24.7■■□□□ 1.54
GPHN-211ENST00000556020 NWD2Q9ULI1 1742 aa24.69■■□□□ 1.54
GPHN-211ENST00000556020 ATAD2Q6PL18 1390 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms