RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 XPCQ01831 940 aaPredicted RBP28.87■■■□□ 2.21
SUPT16H-203ENST00000555752 BCL9LQ86UU0 1499 aa28.86■■■□□ 2.21
SUPT16H-203ENST00000555752 ESCO1Q5FWF5 840 aa28.85■■■□□ 2.21
SUPT16H-203ENST00000555752 HFM1A2PYH4 1435 aa28.85■■■□□ 2.21
SUPT16H-203ENST00000555752 PXDNQ92626 1479 aa28.85■■■□□ 2.21
SUPT16H-203ENST00000555752 ZRANB1Q9UGI0 708 aa28.84■■■□□ 2.21
SUPT16H-203ENST00000555752 NAIPQ13075 1403 aa28.84■■■□□ 2.21
SUPT16H-203ENST00000555752 MARF1Q9Y4F3 1742 aaKnown RBP28.83■■■□□ 2.21
SUPT16H-203ENST00000555752 PPLO60437 1756 aa28.83■■■□□ 2.21
SUPT16H-203ENST00000555752 NPHP3Q7Z494 1330 aa28.81■■■□□ 2.2
SUPT16H-203ENST00000555752 FOXO3O43524 673 aa28.81■■■□□ 2.2
SUPT16H-203ENST00000555752 CDC42BPGQ6DT37 1551 aa28.8■■■□□ 2.2
SUPT16H-203ENST00000555752 RPGRIP1LQ68CZ1 1315 aa28.78■■■□□ 2.2
SUPT16H-203ENST00000555752 NUTM2FA1L443 756 aa28.78■■■□□ 2.2
SUPT16H-203ENST00000555752 GJD4Q96KN9 370 aaPredicted RBP28.77■■■□□ 2.2
SUPT16H-203ENST00000555752 WAPLQ7Z5K2 1190 aa28.74■■■□□ 2.19
SUPT16H-203ENST00000555752 CCDC125Q86Z20 511 aa28.73■■■□□ 2.19
SUPT16H-203ENST00000555752 STK26Q9P289 416 aa28.73■■■□□ 2.19
SUPT16H-203ENST00000555752 ADGRF5Q8IZF2 1346 aa28.71■■■□□ 2.19
SUPT16H-203ENST00000555752 GLI3P10071 1580 aa28.71■■■□□ 2.19
SUPT16H-203ENST00000555752 FOXD1Q16676 465 aa28.71■■■□□ 2.19
SUPT16H-203ENST00000555752 SLC4A1APQ9BWU0 796 aaKnown RBP28.71■■■□□ 2.19
SUPT16H-203ENST00000555752 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.7■■■□□ 2.19
SUPT16H-203ENST00000555752 RRBP1Q9P2E9 1410 aaKnown RBP28.69■■■□□ 2.18
SUPT16H-203ENST00000555752 RALGAPBQ86X10 1494 aa28.69■■■□□ 2.18
SUPT16H-203ENST00000555752 PLEKHH1Q9ULM0 1364 aa28.68■■■□□ 2.18
SUPT16H-203ENST00000555752 UNC5CLQ8IV45 518 aa28.67■■■□□ 2.18
SUPT16H-203ENST00000555752 LRPPRCP42704 1394 aaKnown RBP28.66■■■□□ 2.18
SUPT16H-203ENST00000555752 SLIT2O94813 1529 aa28.66■■■□□ 2.18
SUPT16H-203ENST00000555752 BRWD3Q6RI45 1802 aa28.66■■■□□ 2.18
SUPT16H-203ENST00000555752 SPATA31A3Q5VYP0 1347 aa28.65■■■□□ 2.18
SUPT16H-203ENST00000555752 TECPR2O15040 1411 aa28.64■■■□□ 2.18
SUPT16H-203ENST00000555752 TMEM132EQ6IEE7 984 aa28.64■■■□□ 2.18
SUPT16H-203ENST00000555752 DEFB132Q7Z7B7 95 aa28.64■■■□□ 2.18
SUPT16H-203ENST00000555752 BLMP54132 1417 aaPredicted RBP28.63■■■□□ 2.17
SUPT16H-203ENST00000555752 FMN2Q9NZ56 1722 aa28.63■■■□□ 2.17
SUPT16H-203ENST00000555752 RGL3Q3MIN7 710 aa28.62■■■□□ 2.17
SUPT16H-203ENST00000555752 USP32Q8NFA0 1604 aa28.61■■■□□ 2.17
SUPT16H-203ENST00000555752 PLEKHG5O94827 1062 aa28.6■■■□□ 2.17
SUPT16H-203ENST00000555752 KNDC1Q76NI1 1749 aa28.59■■■□□ 2.17
SUPT16H-203ENST00000555752 IFT172Q9UG01 1749 aa28.58■■■□□ 2.17
SUPT16H-203ENST00000555752 KRT28Q7Z3Y7 464 aa28.58■■■□□ 2.17
SUPT16H-203ENST00000555752 CABLES1Q8TDN4 633 aa28.58■■■□□ 2.17
SUPT16H-203ENST00000555752 ABCC11Q96J66 1382 aa28.58■■■□□ 2.17
SUPT16H-203ENST00000555752 KIF1AQ12756 1690 aa28.58■■■□□ 2.16
SUPT16H-203ENST00000555752 CCDC144AA2RUR9 1427 aa28.57■■■□□ 2.16
SUPT16H-203ENST00000555752 RGPD8O14715 1765 aaPredicted RBP28.57■■■□□ 2.16
SUPT16H-203ENST00000555752 SPATA31E1Q6ZUB1 1445 aa28.56■■■□□ 2.16
SUPT16H-203ENST00000555752 SEPT12Q8IYM1 358 aa28.56■■■□□ 2.16
SUPT16H-203ENST00000555752 PLCH1Q4KWH8 1693 aa28.53■■■□□ 2.16
SUPT16H-203ENST00000555752 YTHDC2Q9H6S0 1430 aaKnown RBP28.52■■■□□ 2.16
SUPT16H-203ENST00000555752 PIK3C2GO75747 1445 aa28.52■■■□□ 2.16
SUPT16H-203ENST00000555752 ANKRD30BQ9BXX2 1392 aa28.51■■■□□ 2.16
SUPT16H-203ENST00000555752 HAP1P54257 671 aaPredicted RBP28.51■■■□□ 2.15
SUPT16H-203ENST00000555752 VPS72Q15906 364 aa28.51■■■□□ 2.15
SUPT16H-203ENST00000555752 TNS3Q68CZ2 1445 aa28.51■■■□□ 2.15
SUPT16H-203ENST00000555752 CCDC9Q9Y3X0 531 aaKnown RBP28.5■■■□□ 2.15
SUPT16H-203ENST00000555752 SF3B2Q13435 895 aaKnown RBP28.49■■■□□ 2.15
SUPT16H-203ENST00000555752 PHF8Q9UPP1 1060 aa28.49■■■□□ 2.15
SUPT16H-203ENST00000555752 ABCA3Q99758 1704 aa28.49■■■□□ 2.15
SUPT16H-203ENST00000555752 NWD2Q9ULI1 1742 aa28.46■■■□□ 2.15
SUPT16H-203ENST00000555752 LMOD2Q6P5Q4 547 aa28.46■■■□□ 2.15
SUPT16H-203ENST00000555752 ONECUT3O60422 494 aaPredicted RBP28.45■■■□□ 2.14
SUPT16H-203ENST00000555752 KRT27Q7Z3Y8 459 aa28.45■■■□□ 2.14
SUPT16H-203ENST00000555752 PSME1Q06323 249 aa28.44■■■□□ 2.14
SUPT16H-203ENST00000555752 NRXN1Q9ULB1 1477 aa28.43■■■□□ 2.14
SUPT16H-203ENST00000555752 PSDA5PKW4 1024 aaPredicted RBP28.43■■■□□ 2.14
SUPT16H-203ENST00000555752 FAM83GA6ND36 823 aa28.43■■■□□ 2.14
SUPT16H-203ENST00000555752 LRP5O75197 1615 aa28.43■■■□□ 2.14
SUPT16H-203ENST00000555752 SAFB2Q14151 953 aaKnown RBP eCLIP28.42■■■□□ 2.14
SUPT16H-203ENST00000555752 MPHOSPH9Q99550 1183 aa28.42■■■□□ 2.14
SUPT16H-203ENST00000555752 SBNO1A3KN83 1393 aa28.41■■■□□ 2.14
SUPT16H-203ENST00000555752 SIRT1Q96EB6 747 aa28.4■■■□□ 2.14
SUPT16H-203ENST00000555752 A0A0G2JS52 829 aa28.39■■■□□ 2.14
SUPT16H-203ENST00000555752 MYT1Q01538 1121 aa28.39■■■□□ 2.14
SUPT16H-203ENST00000555752 C14orf93Q9H972 538 aaKnown RBP28.39■■■□□ 2.14
SUPT16H-203ENST00000555752 CFAP70Q5T0N1 1121 aa28.38■■■□□ 2.13
SUPT16H-203ENST00000555752 PMFBP1Q8TBY8 1022 aa28.38■■■□□ 2.13
SUPT16H-203ENST00000555752 PRAM1Q96QH2 718 aa28.37■■■□□ 2.13
SUPT16H-203ENST00000555752 NRAPQ86VF7 1730 aa28.37■■■□□ 2.13
SUPT16H-203ENST00000555752 ARHGEF10O15013 1369 aa28.37■■■□□ 2.13
SUPT16H-203ENST00000555752 FAM98CQ17RN3 349 aaKnown RBP28.36■■■□□ 2.13
SUPT16H-203ENST00000555752 FAM182BQ5T319 152 aa28.34■■■□□ 2.13
SUPT16H-203ENST00000555752 DHX57Q6P158 1386 aaKnown RBP28.34■■■□□ 2.13
SUPT16H-203ENST00000555752 HRCP23327 699 aa28.33■■■□□ 2.13
SUPT16H-203ENST00000555752 BAG6P46379 1132 aa28.33■■■□□ 2.13
SUPT16H-203ENST00000555752 BTG4Q9NY30 223 aa28.32■■■□□ 2.12
SUPT16H-203ENST00000555752 TRPM3Q9HCF6 1732 aaPredicted RBP28.32■■■□□ 2.12
SUPT16H-203ENST00000555752 EN1Q05925 392 aaPredicted RBP28.3■■■□□ 2.12
SUPT16H-203ENST00000555752 ANKARQ7Z5J8 1434 aa28.27■■■□□ 2.12
SUPT16H-203ENST00000555752 POGKQ9P215 609 aa28.27■■■□□ 2.12
SUPT16H-203ENST00000555752 ALS2Q96Q42 1657 aa28.26■■■□□ 2.12
SUPT16H-203ENST00000555752 HIRIP3Q9BW71 556 aaPredicted RBP28.26■■■□□ 2.11
SUPT16H-203ENST00000555752 COL14A1Q05707 1796 aaKnown RBP28.26■■■□□ 2.11
SUPT16H-203ENST00000555752 ADGRB2O60241 1585 aa28.24■■■□□ 2.11
SUPT16H-203ENST00000555752 RGPD1P0DJD0 1748 aa28.24■■■□□ 2.11
SUPT16H-203ENST00000555752 DLC1Q96QB1 1528 aa28.23■■■□□ 2.11
SUPT16H-203ENST00000555752 PRR36Q9H6K5 1346 aa28.23■■■□□ 2.11
SUPT16H-203ENST00000555752 R3HDM1Q15032 1099 aaKnown RBP28.23■■■□□ 2.11
SUPT16H-203ENST00000555752 SPATA31A5Q5VU36 1347 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms