RNA–Protein interactions for RNA: ENST00000555690.5

PPP4R4-204, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 3

Gene PPP4R4, Length 680 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-204ENST00000555690 LRPPRCP42704 1394 aaKnown RBP36.28■■■■□ 3.4
PPP4R4-204ENST00000555690 IFT172Q9UG01 1749 aa36.28■■■■□ 3.4
PPP4R4-204ENST00000555690 ADAMTS2O95450 1211 aa36.28■■■■□ 3.4
PPP4R4-204ENST00000555690 ESCO1Q5FWF5 840 aa36.28■■■■□ 3.4
PPP4R4-204ENST00000555690 ACIN1Q9UKV3 1341 aaKnown RBP36.27■■■■□ 3.4
PPP4R4-204ENST00000555690 TECPR2O15040 1411 aa36.26■■■■□ 3.4
PPP4R4-204ENST00000555690 PIK3C2GO75747 1445 aa36.25■■■■□ 3.39
PPP4R4-204ENST00000555690 ABCC11Q96J66 1382 aa36.25■■■■□ 3.39
PPP4R4-204ENST00000555690 CDC42BPGQ6DT37 1551 aa36.24■■■■□ 3.39
PPP4R4-204ENST00000555690 QTRT2Q9H974 415 aaKnown RBP36.23■■■■□ 3.39
PPP4R4-204ENST00000555690 NUTM2FA1L443 756 aa36.22■■■■□ 3.39
PPP4R4-204ENST00000555690 NGLY1Q96IV0 654 aa36.22■■■■□ 3.39
PPP4R4-204ENST00000555690 PLEKHH1Q9ULM0 1364 aa36.22■■■■□ 3.39
PPP4R4-204ENST00000555690 UPF1Q92900 1129 aaKnown RBP eCLIP36.21■■■■□ 3.39
PPP4R4-204ENST00000555690 NPHP3Q7Z494 1330 aa36.2■■■■□ 3.39
PPP4R4-204ENST00000555690 CDK12Q9NYV4 1490 aaPredicted RBP36.18■■■■□ 3.38
PPP4R4-204ENST00000555690 YTHDC2Q9H6S0 1430 aaKnown RBP36.17■■■■□ 3.38
PPP4R4-204ENST00000555690 FOXO3O43524 673 aa36.17■■■■□ 3.38
PPP4R4-204ENST00000555690 RAB3GAP2Q9H2M9 1393 aa36.16■■■■□ 3.38
PPP4R4-204ENST00000555690 XPCQ01831 940 aaPredicted RBP36.16■■■■□ 3.38
PPP4R4-204ENST00000555690 C14orf93Q9H972 538 aaKnown RBP36.16■■■■□ 3.38
PPP4R4-204ENST00000555690 RBM6P78332 1123 aaKnown RBP36.15■■■■□ 3.38
PPP4R4-204ENST00000555690 KNDC1Q76NI1 1749 aa36.14■■■■□ 3.38
PPP4R4-204ENST00000555690 PXDNQ92626 1479 aa36.12■■■■□ 3.37
PPP4R4-204ENST00000555690 CFAP70Q5T0N1 1121 aa36.12■■■■□ 3.37
PPP4R4-204ENST00000555690 SIRT1Q96EB6 747 aa36.09■■■■□ 3.37
PPP4R4-204ENST00000555690 USP21Q9UK80 565 aa36.09■■■■□ 3.37
PPP4R4-204ENST00000555690 NRXN1Q9ULB1 1477 aa36.09■■■■□ 3.37
PPP4R4-204ENST00000555690 COL22A1Q8NFW1 1626 aaPredicted RBP36.08■■■■□ 3.37
PPP4R4-204ENST00000555690 RGS12O14924 1447 aa36.08■■■■□ 3.37
PPP4R4-204ENST00000555690 MYOM2P54296 1465 aa36.06■■■■□ 3.36
PPP4R4-204ENST00000555690 DHX57Q6P158 1386 aaKnown RBP36.06■■■■□ 3.36
PPP4R4-204ENST00000555690 FNBP4Q8N3X1 1017 aaPredicted RBP36.05■■■■□ 3.36
PPP4R4-204ENST00000555690 FMN2Q9NZ56 1722 aa36.03■■■■□ 3.36
PPP4R4-204ENST00000555690 TRPC5Q9UL62 973 aaPredicted RBP36.01■■■■□ 3.36
PPP4R4-204ENST00000555690 SAFB2Q14151 953 aaKnown RBP eCLIP36■■■■□ 3.35
PPP4R4-204ENST00000555690 PRAM1Q96QH2 718 aa36■■■■□ 3.35
PPP4R4-204ENST00000555690 KRT28Q7Z3Y7 464 aa35.96■■■■□ 3.35
PPP4R4-204ENST00000555690 SPATA31A3Q5VYP0 1347 aa35.95■■■■□ 3.35
PPP4R4-204ENST00000555690 ATRNO75882 1429 aa35.93■■■■□ 3.34
PPP4R4-204ENST00000555690 POGKQ9P215 609 aa35.93■■■■□ 3.34
PPP4R4-204ENST00000555690 PHF8Q9UPP1 1060 aa35.93■■■■□ 3.34
PPP4R4-204ENST00000555690 KIF1AQ12756 1690 aa35.93■■■■□ 3.34
PPP4R4-204ENST00000555690 KDM2AQ9Y2K7 1162 aa35.92■■■■□ 3.34
PPP4R4-204ENST00000555690 BCL9LQ86UU0 1499 aa35.91■■■■□ 3.34
PPP4R4-204ENST00000555690 DCAF11Q8TEB1 546 aa35.89■■■■□ 3.34
PPP4R4-204ENST00000555690 RGPD8O14715 1765 aaPredicted RBP35.89■■■■□ 3.34
PPP4R4-204ENST00000555690 TRAK1Q9UPV9 953 aa35.87■■■■□ 3.33
PPP4R4-204ENST00000555690 DLC1Q96QB1 1528 aa35.87■■■■□ 3.33
PPP4R4-204ENST00000555690 MARF1Q9Y4F3 1742 aaKnown RBP35.86■■■■□ 3.33
PPP4R4-204ENST00000555690 PSME1Q06323 249 aa35.86■■■■□ 3.33
PPP4R4-204ENST00000555690 ADGRB1O14514 1584 aa35.85■■■■□ 3.33
PPP4R4-204ENST00000555690 HRCP23327 699 aa35.85■■■■□ 3.33
PPP4R4-204ENST00000555690 HIRIP3Q9BW71 556 aaPredicted RBP35.82■■■■□ 3.32
PPP4R4-204ENST00000555690 ATAD2Q6PL18 1390 aa35.81■■■■□ 3.32
PPP4R4-204ENST00000555690 PMFBP1Q8TBY8 1022 aa35.81■■■■□ 3.32
PPP4R4-204ENST00000555690 TNS3Q68CZ2 1445 aa35.81■■■■□ 3.32
PPP4R4-204ENST00000555690 GJD4Q96KN9 370 aaPredicted RBP35.8■■■■□ 3.32
PPP4R4-204ENST00000555690 PLEKHG5O94827 1062 aa35.79■■■■□ 3.32
PPP4R4-204ENST00000555690 HAP1P54257 671 aaPredicted RBP35.79■■■■□ 3.32
PPP4R4-204ENST00000555690 CABLES1Q8TDN4 633 aa35.79■■■■□ 3.32
PPP4R4-204ENST00000555690 LMOD2Q6P5Q4 547 aa35.78■■■■□ 3.32
PPP4R4-204ENST00000555690 UNC5CLQ8IV45 518 aa35.78■■■■□ 3.32
PPP4R4-204ENST00000555690 STAC3Q96MF2 364 aa35.77■■■■□ 3.32
PPP4R4-204ENST00000555690 MINK1Q8N4C8 1332 aaPredicted RBP35.77■■■■□ 3.32
PPP4R4-204ENST00000555690 SBNO1A3KN83 1393 aa35.76■■■■□ 3.32
PPP4R4-204ENST00000555690 ANKARQ7Z5J8 1434 aa35.76■■■■□ 3.32
PPP4R4-204ENST00000555690 SLIT2O94813 1529 aa35.76■■■■□ 3.31
PPP4R4-204ENST00000555690 USP32Q8NFA0 1604 aa35.75■■■■□ 3.31
PPP4R4-204ENST00000555690 ADGRB2O60241 1585 aa35.74■■■■□ 3.31
PPP4R4-204ENST00000555690 ARHGEF10O15013 1369 aa35.7■■■■□ 3.31
PPP4R4-204ENST00000555690 EP400Q96L91 3159 aa35.7■■■■□ 3.31
PPP4R4-204ENST00000555690 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.69■■■■□ 3.3
PPP4R4-204ENST00000555690 PRR36Q9H6K5 1346 aa35.69■■■■□ 3.3
PPP4R4-204ENST00000555690 WASLO00401 505 aaPredicted RBP35.68■■■■□ 3.3
PPP4R4-204ENST00000555690 RALGAPBQ86X10 1494 aa35.67■■■■□ 3.3
PPP4R4-204ENST00000555690 EIF3AQ14152 1382 aaKnown RBP35.65■■■■□ 3.3
PPP4R4-204ENST00000555690 GLI3P10071 1580 aa35.64■■■■□ 3.3
PPP4R4-204ENST00000555690 GPRASP1Q5JY77 1395 aa35.63■■■■□ 3.29
PPP4R4-204ENST00000555690 TULP4Q9NRJ4 1543 aa35.62■■■■□ 3.29
PPP4R4-204ENST00000555690 FAM83GA6ND36 823 aa35.6■■■■□ 3.29
PPP4R4-204ENST00000555690 VPS72Q15906 364 aa35.6■■■■□ 3.29
PPP4R4-204ENST00000555690 ABCA3Q99758 1704 aa35.59■■■■□ 3.29
PPP4R4-204ENST00000555690 NGDNQ8NEJ9 315 aaKnown RBP35.58■■■■□ 3.29
PPP4R4-204ENST00000555690 TRPM3Q9HCF6 1732 aaPredicted RBP35.57■■■■□ 3.29
PPP4R4-204ENST00000555690 CCDC9Q9Y3X0 531 aaKnown RBP35.57■■■■□ 3.28
PPP4R4-204ENST00000555690 CCDC125Q86Z20 511 aa35.56■■■■□ 3.28
PPP4R4-204ENST00000555690 PLCH1Q4KWH8 1693 aa35.56■■■■□ 3.28
PPP4R4-204ENST00000555690 ARHGEF28Q8N1W1 1705 aaKnown RBP35.54■■■■□ 3.28
PPP4R4-204ENST00000555690 SEPT12Q8IYM1 358 aa35.54■■■■□ 3.28
PPP4R4-204ENST00000555690 NUDT16Q96DE0 195 aaKnown RBP35.53■■■■□ 3.28
PPP4R4-204ENST00000555690 NWD2Q9ULI1 1742 aa35.52■■■■□ 3.28
PPP4R4-204ENST00000555690 PAK3O75914 559 aaPredicted RBP35.52■■■■□ 3.28
PPP4R4-204ENST00000555690 ALS2Q96Q42 1657 aa35.51■■■■□ 3.28
PPP4R4-204ENST00000555690 SRCAPQ6ZRS2 3230 aa35.5■■■■□ 3.27
PPP4R4-204ENST00000555690 CDK19Q9BWU1 502 aa35.49■■■■□ 3.27
PPP4R4-204ENST00000555690 BTG4Q9NY30 223 aa35.49■■■■□ 3.27
PPP4R4-204ENST00000555690 ONECUT3O60422 494 aaPredicted RBP35.48■■■■□ 3.27
PPP4R4-204ENST00000555690 ATP7BP35670 1465 aa35.48■■■■□ 3.27
PPP4R4-204ENST00000555690 BRWD3Q6RI45 1802 aa35.47■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms