RNA–Protein interactions for RNA: ENST00000555303.1

AC004828.1-201, humanhuman

TSL 3 BASIC

Gene AC004828.1, Length 654 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004828.1-201ENST00000555303 RGL3Q3MIN7 710 aa13.34□□□□□ -0.27
AC004828.1-201ENST00000555303 KIF1AQ12756 1690 aa13.34□□□□□ -0.27
AC004828.1-201ENST00000555303 YTHDC2Q9H6S0 1430 aaKnown RBP13.33□□□□□ -0.28
AC004828.1-201ENST00000555303 CDK12Q9NYV4 1490 aaPredicted RBP13.32□□□□□ -0.28
AC004828.1-201ENST00000555303 SOS2Q07890 1332 aaPredicted RBP13.32□□□□□ -0.28
AC004828.1-201ENST00000555303 HRCP23327 699 aa13.3□□□□□ -0.28
AC004828.1-201ENST00000555303 SIRT1Q96EB6 747 aa13.3□□□□□ -0.28
AC004828.1-201ENST00000555303 NPHP3Q7Z494 1330 aa13.3□□□□□ -0.28
AC004828.1-201ENST00000555303 MARF1Q9Y4F3 1742 aaKnown RBP13.3□□□□□ -0.28
AC004828.1-201ENST00000555303 PXDNQ92626 1479 aa13.29□□□□□ -0.28
AC004828.1-201ENST00000555303 DLC1Q96QB1 1528 aa13.29□□□□□ -0.28
AC004828.1-201ENST00000555303 ORAI2Q96SN7 254 aa13.29□□□□□ -0.28
AC004828.1-201ENST00000555303 C14orf93Q9H972 538 aaKnown RBP13.29□□□□□ -0.28
AC004828.1-201ENST00000555303 ADGRB2O60241 1585 aa13.28□□□□□ -0.28
AC004828.1-201ENST00000555303 NUTM2BA6NNL0 878 aaPredicted RBP13.28□□□□□ -0.28
AC004828.1-201ENST00000555303 NUTM2EB1AL46 878 aaPredicted RBP13.28□□□□□ -0.28
AC004828.1-201ENST00000555303 NUTM2AQ8IVF1 878 aaPredicted RBP13.28□□□□□ -0.28
AC004828.1-201ENST00000555303 DDX17Q92841 729 aaKnown RBP13.28□□□□□ -0.28
AC004828.1-201ENST00000555303 DHX57Q6P158 1386 aaKnown RBP13.28□□□□□ -0.28
AC004828.1-201ENST00000555303 STK26Q9P289 416 aa13.27□□□□□ -0.29
AC004828.1-201ENST00000555303 AFF2P51816 1311 aa13.27□□□□□ -0.29
AC004828.1-201ENST00000555303 ADGRB1O14514 1584 aa13.26□□□□□ -0.29
AC004828.1-201ENST00000555303 ESCO1Q5FWF5 840 aa13.26□□□□□ -0.29
AC004828.1-201ENST00000555303 TMEM132EQ6IEE7 984 aa13.26□□□□□ -0.29
AC004828.1-201ENST00000555303 STAC3Q96MF2 364 aa13.26□□□□□ -0.29
AC004828.1-201ENST00000555303 PLEKHH1Q9ULM0 1364 aa13.25□□□□□ -0.29
AC004828.1-201ENST00000555303 RXRBP28702 533 aa13.25□□□□□ -0.29
AC004828.1-201ENST00000555303 WAPLQ7Z5K2 1190 aa13.25□□□□□ -0.29
AC004828.1-201ENST00000555303 RGPD8O14715 1765 aaPredicted RBP13.25□□□□□ -0.29
AC004828.1-201ENST00000555303 C8orf37Q96NL8 207 aa13.24□□□□□ -0.29
AC004828.1-201ENST00000555303 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.23□□□□□ -0.29
AC004828.1-201ENST00000555303 CFAP70Q5T0N1 1121 aa13.23□□□□□ -0.29
AC004828.1-201ENST00000555303 ANKARQ7Z5J8 1434 aa13.22□□□□□ -0.29
AC004828.1-201ENST00000555303 KIAA1210Q9ULL0 1709 aa13.22□□□□□ -0.29
AC004828.1-201ENST00000555303 EIF3AQ14152 1382 aaKnown RBP13.21□□□□□ -0.29
AC004828.1-201ENST00000555303 RBM6P78332 1123 aaKnown RBP13.21□□□□□ -0.29
AC004828.1-201ENST00000555303 USP32Q8NFA0 1604 aa13.21□□□□□ -0.3
AC004828.1-201ENST00000555303 ARHGEF28Q8N1W1 1705 aaKnown RBP13.2□□□□□ -0.3
AC004828.1-201ENST00000555303 FOXO3O43524 673 aa13.2□□□□□ -0.3
AC004828.1-201ENST00000555303 NGLY1Q96IV0 654 aa13.2□□□□□ -0.3
AC004828.1-201ENST00000555303 RGS12O14924 1447 aa13.2□□□□□ -0.3
AC004828.1-201ENST00000555303 ITSN1Q15811 1721 aa13.19□□□□□ -0.3
AC004828.1-201ENST00000555303 ABCA3Q99758 1704 aa13.19□□□□□ -0.3
AC004828.1-201ENST00000555303 ADAMTS2O95450 1211 aa13.19□□□□□ -0.3
AC004828.1-201ENST00000555303 FNBP4Q8N3X1 1017 aaPredicted RBP13.19□□□□□ -0.3
AC004828.1-201ENST00000555303 PRAM1Q96QH2 718 aa13.19□□□□□ -0.3
AC004828.1-201ENST00000555303 QTRT2Q9H974 415 aaKnown RBP13.19□□□□□ -0.3
AC004828.1-201ENST00000555303 TNS3Q68CZ2 1445 aa13.19□□□□□ -0.3
AC004828.1-201ENST00000555303 NUTM2FA1L443 756 aa13.18□□□□□ -0.3
AC004828.1-201ENST00000555303 ATRNO75882 1429 aa13.18□□□□□ -0.3
AC004828.1-201ENST00000555303 TULP4Q9NRJ4 1543 aa13.18□□□□□ -0.3
AC004828.1-201ENST00000555303 SPATA31A3Q5VYP0 1347 aa13.17□□□□□ -0.3
AC004828.1-201ENST00000555303 DCAF11Q8TEB1 546 aa13.17□□□□□ -0.3
AC004828.1-201ENST00000555303 POGKQ9P215 609 aa13.17□□□□□ -0.3
AC004828.1-201ENST00000555303 USP21Q9UK80 565 aa13.17□□□□□ -0.3
AC004828.1-201ENST00000555303 TRPC5Q9UL62 973 aaPredicted RBP13.17□□□□□ -0.3
AC004828.1-201ENST00000555303 TRPM3Q9HCF6 1732 aaPredicted RBP13.16□□□□□ -0.3
AC004828.1-201ENST00000555303 NWD2Q9ULI1 1742 aa13.16□□□□□ -0.3
AC004828.1-201ENST00000555303 PSME1Q06323 249 aa13.16□□□□□ -0.3
AC004828.1-201ENST00000555303 PHF8Q9UPP1 1060 aa13.16□□□□□ -0.3
AC004828.1-201ENST00000555303 SBNO1A3KN83 1393 aa13.16□□□□□ -0.3
AC004828.1-201ENST00000555303 ARHGEF10O15013 1369 aa13.16□□□□□ -0.3
AC004828.1-201ENST00000555303 XPCQ01831 940 aaPredicted RBP13.15□□□□□ -0.3
AC004828.1-201ENST00000555303 KRT28Q7Z3Y7 464 aa13.15□□□□□ -0.3
AC004828.1-201ENST00000555303 UPF1Q92900 1129 aaKnown RBP eCLIP13.15□□□□□ -0.3
AC004828.1-201ENST00000555303 EP400Q96L91 3159 aa13.15□□□□□ -0.3
AC004828.1-201ENST00000555303 PLCH1Q4KWH8 1693 aa13.15□□□□□ -0.31
AC004828.1-201ENST00000555303 ALS2Q96Q42 1657 aa13.15□□□□□ -0.31
AC004828.1-201ENST00000555303 BCL9LQ86UU0 1499 aa13.14□□□□□ -0.31
AC004828.1-201ENST00000555303 SLIT2O94813 1529 aa13.13□□□□□ -0.31
AC004828.1-201ENST00000555303 SAFB2Q14151 953 aaKnown RBP eCLIP13.13□□□□□ -0.31
AC004828.1-201ENST00000555303 TRAK1Q9UPV9 953 aa13.13□□□□□ -0.31
AC004828.1-201ENST00000555303 KDM2AQ9Y2K7 1162 aa13.13□□□□□ -0.31
AC004828.1-201ENST00000555303 ATAD2Q6PL18 1390 aa13.12□□□□□ -0.31
AC004828.1-201ENST00000555303 TOPAZ1Q8N9V7 1692 aa13.12□□□□□ -0.31
AC004828.1-201ENST00000555303 CRYBG1Q9Y4K1 1723 aa13.1□□□□□ -0.31
AC004828.1-201ENST00000555303 ATP7BP35670 1465 aa13.1□□□□□ -0.31
AC004828.1-201ENST00000555303 GPRASP1Q5JY77 1395 aa13.1□□□□□ -0.31
AC004828.1-201ENST00000555303 WASLO00401 505 aaPredicted RBP13.1□□□□□ -0.31
AC004828.1-201ENST00000555303 GLI3P10071 1580 aa13.09□□□□□ -0.31
AC004828.1-201ENST00000555303 MINK1Q8N4C8 1332 aaPredicted RBP13.09□□□□□ -0.31
AC004828.1-201ENST00000555303 NRAPQ86VF7 1730 aa13.08□□□□□ -0.32
AC004828.1-201ENST00000555303 COL14A1Q05707 1796 aaKnown RBP13.08□□□□□ -0.32
AC004828.1-201ENST00000555303 HAP1P54257 671 aaPredicted RBP13.08□□□□□ -0.32
AC004828.1-201ENST00000555303 UNC5CLQ8IV45 518 aa13.08□□□□□ -0.32
AC004828.1-201ENST00000555303 HIRIP3Q9BW71 556 aaPredicted RBP13.08□□□□□ -0.32
AC004828.1-201ENST00000555303 PRR36Q9H6K5 1346 aa13.08□□□□□ -0.32
AC004828.1-201ENST00000555303 PMFBP1Q8TBY8 1022 aa13.07□□□□□ -0.32
AC004828.1-201ENST00000555303 GJD4Q96KN9 370 aaPredicted RBP13.07□□□□□ -0.32
AC004828.1-201ENST00000555303 RALGAPBQ86X10 1494 aa13.07□□□□□ -0.32
AC004828.1-201ENST00000555303 PHRF1Q9P1Y6 1649 aaKnown RBP13.06□□□□□ -0.32
AC004828.1-201ENST00000555303 QRICH2Q9H0J4 1663 aa13.05□□□□□ -0.32
AC004828.1-201ENST00000555303 BRWD3Q6RI45 1802 aa13.05□□□□□ -0.32
AC004828.1-201ENST00000555303 TRPM1Q7Z4N2 1603 aa13.04□□□□□ -0.32
AC004828.1-201ENST00000555303 LMOD2Q6P5Q4 547 aa13.04□□□□□ -0.32
AC004828.1-201ENST00000555303 VPS72Q15906 364 aa13.03□□□□□ -0.32
AC004828.1-201ENST00000555303 NGDNQ8NEJ9 315 aaKnown RBP13.03□□□□□ -0.32
AC004828.1-201ENST00000555303 POLR3AO14802 1390 aaPredicted RBP13.03□□□□□ -0.32
AC004828.1-201ENST00000555303 CCDC125Q86Z20 511 aa13.02□□□□□ -0.33
AC004828.1-201ENST00000555303 CABLES1Q8TDN4 633 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms