RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 BLMP54132 1417 aaPredicted RBP16.12■□□□□ 0.17
SRP54-205ENST00000554803 ADGRL2O95490 1459 aa16.11■□□□□ 0.17
SRP54-205ENST00000554803 CHIC2Q9UKJ5 165 aa16.11■□□□□ 0.17
SRP54-205ENST00000554803 IQGAP3Q86VI3 1631 aa16.11■□□□□ 0.17
SRP54-205ENST00000554803 C1orf167Q5SNV9 1468 aa16.1■□□□□ 0.17
SRP54-205ENST00000554803 SOS2Q07890 1332 aaPredicted RBP16.1■□□□□ 0.17
SRP54-205ENST00000554803 BCL9LQ86UU0 1499 aa16.1■□□□□ 0.17
SRP54-205ENST00000554803 MYOM2P54296 1465 aa16.08■□□□□ 0.16
SRP54-205ENST00000554803 ITGAEP38570 1179 aa16.07■□□□□ 0.16
SRP54-205ENST00000554803 GLI3P10071 1580 aa16.07■□□□□ 0.16
SRP54-205ENST00000554803 ANKRD50Q9ULJ7 1429 aa16.06■□□□□ 0.16
SRP54-205ENST00000554803 DEFB132Q7Z7B7 95 aa16.06■□□□□ 0.16
SRP54-205ENST00000554803 GJD4Q96KN9 370 aaPredicted RBP16.06■□□□□ 0.16
SRP54-205ENST00000554803 METP08581 1390 aa16.04■□□□□ 0.16
SRP54-205ENST00000554803 NEUROD1Q13562 356 aa16.02■□□□□ 0.16
SRP54-205ENST00000554803 ORAI2Q96SN7 254 aa16.02■□□□□ 0.16
SRP54-205ENST00000554803 RALGAPBQ86X10 1494 aa16.02■□□□□ 0.15
SRP54-205ENST00000554803 MYT1Q01538 1121 aa16.01■□□□□ 0.15
SRP54-205ENST00000554803 SF3B2Q13435 895 aaKnown RBP16.01■□□□□ 0.15
SRP54-205ENST00000554803 SLIT2O94813 1529 aa15.98■□□□□ 0.15
SRP54-205ENST00000554803 PXDNQ92626 1479 aa15.97■□□□□ 0.15
SRP54-205ENST00000554803 PSDA5PKW4 1024 aaPredicted RBP15.97■□□□□ 0.15
SRP54-205ENST00000554803 UNC5CLQ8IV45 518 aa15.96■□□□□ 0.15
SRP54-205ENST00000554803 NEXMIFQ5QGS0 1516 aa15.95■□□□□ 0.14
SRP54-205ENST00000554803 DHX57Q6P158 1386 aaKnown RBP15.95■□□□□ 0.14
SRP54-205ENST00000554803 RGPD1P0DJD0 1748 aa15.94■□□□□ 0.14
SRP54-205ENST00000554803 NWD2Q9ULI1 1742 aa15.94■□□□□ 0.14
SRP54-205ENST00000554803 USP32Q8NFA0 1604 aa15.94■□□□□ 0.14
SRP54-205ENST00000554803 NPHP3Q7Z494 1330 aa15.94■□□□□ 0.14
SRP54-205ENST00000554803 PLCH1Q4KWH8 1693 aa15.93■□□□□ 0.14
SRP54-205ENST00000554803 PRAG1Q86YV5 1406 aa15.93■□□□□ 0.14
SRP54-205ENST00000554803 SEPT12Q8IYM1 358 aa15.92■□□□□ 0.14
SRP54-205ENST00000554803 CDC42BPGQ6DT37 1551 aa15.92■□□□□ 0.14
SRP54-205ENST00000554803 KIF1BO60333 1816 aa15.91■□□□□ 0.14
SRP54-205ENST00000554803 ROBO2Q9HCK4 1378 aa15.91■□□□□ 0.14
SRP54-205ENST00000554803 BAG6P46379 1132 aa15.91■□□□□ 0.14
SRP54-205ENST00000554803 GTF3C3Q9Y5Q9 886 aa15.91■□□□□ 0.14
SRP54-205ENST00000554803 NAIPQ13075 1403 aa15.91■□□□□ 0.14
SRP54-205ENST00000554803 ROCK1Q13464 1354 aa15.9■□□□□ 0.14
SRP54-205ENST00000554803 ZNF326Q5BKZ1 582 aaKnown RBP15.9■□□□□ 0.14
SRP54-205ENST00000554803 HFM1A2PYH4 1435 aa15.9■□□□□ 0.14
SRP54-205ENST00000554803 YY1P25490 414 aa15.89■□□□□ 0.13
SRP54-205ENST00000554803 ONECUT3O60422 494 aaPredicted RBP15.88■□□□□ 0.13
SRP54-205ENST00000554803 KRT27Q7Z3Y8 459 aa15.88■□□□□ 0.13
SRP54-205ENST00000554803 TNS1Q9HBL0 1735 aaKnown RBP15.88■□□□□ 0.13
SRP54-205ENST00000554803 RAB3GAP2Q9H2M9 1393 aa15.87■□□□□ 0.13
SRP54-205ENST00000554803 CLTCL1P53675 1640 aa15.86■□□□□ 0.13
SRP54-205ENST00000554803 ABCA3Q99758 1704 aa15.86■□□□□ 0.13
SRP54-205ENST00000554803 VPS72Q15906 364 aa15.86■□□□□ 0.13
SRP54-205ENST00000554803 ESCO1Q5FWF5 840 aa15.86■□□□□ 0.13
SRP54-205ENST00000554803 LRPPRCP42704 1394 aaKnown RBP15.86■□□□□ 0.13
SRP54-205ENST00000554803 FOXO3O43524 673 aa15.85■□□□□ 0.13
SRP54-205ENST00000554803 XPCQ01831 940 aaPredicted RBP15.85■□□□□ 0.13
SRP54-205ENST00000554803 TIMELESSQ9UNS1 1208 aa15.85■□□□□ 0.13
SRP54-205ENST00000554803 KIF1AQ12756 1690 aa15.85■□□□□ 0.13
SRP54-205ENST00000554803 NUP155O75694 1391 aa15.85■□□□□ 0.13
SRP54-205ENST00000554803 R3HDM1Q15032 1099 aaKnown RBP15.84■□□□□ 0.13
SRP54-205ENST00000554803 NRAPQ86VF7 1730 aa15.82■□□□□ 0.12
SRP54-205ENST00000554803 EN1Q05925 392 aaPredicted RBP15.82■□□□□ 0.12
SRP54-205ENST00000554803 SPATA31A3Q5VYP0 1347 aa15.82■□□□□ 0.12
SRP54-205ENST00000554803 DISP2A7MBM2 1401 aa15.82■□□□□ 0.12
SRP54-205ENST00000554803 FMN2Q9NZ56 1722 aa15.81■□□□□ 0.12
SRP54-205ENST00000554803 RGPD8O14715 1765 aaPredicted RBP15.8■□□□□ 0.12
SRP54-205ENST00000554803 PPLO60437 1756 aa15.8■□□□□ 0.12
SRP54-205ENST00000554803 CCDC9Q9Y3X0 531 aaKnown RBP15.79■□□□□ 0.12
SRP54-205ENST00000554803 CCDC144AA2RUR9 1427 aa15.78■□□□□ 0.12
SRP54-205ENST00000554803 MIER1Q8N108 512 aa15.78■□□□□ 0.12
SRP54-205ENST00000554803 RREB1Q92766 1687 aa15.77■□□□□ 0.12
SRP54-205ENST00000554803 ADGRB2O60241 1585 aa15.77■□□□□ 0.11
SRP54-205ENST00000554803 TNS3Q68CZ2 1445 aa15.76■□□□□ 0.11
SRP54-205ENST00000554803 NUP188Q5SRE5 1749 aa15.75■□□□□ 0.11
SRP54-205ENST00000554803 KNDC1Q76NI1 1749 aa15.75■□□□□ 0.11
SRP54-205ENST00000554803 A0A0G2JS52 829 aa15.75■□□□□ 0.11
SRP54-205ENST00000554803 VGFO15240 615 aaPredicted RBP15.75■□□□□ 0.11
SRP54-205ENST00000554803 THSD7AQ9UPZ6 1657 aa15.75■□□□□ 0.11
SRP54-205ENST00000554803 IFT172Q9UG01 1749 aa15.74■□□□□ 0.11
SRP54-205ENST00000554803 HAP1P54257 671 aaPredicted RBP15.74■□□□□ 0.11
SRP54-205ENST00000554803 EZH2Q15910 746 aaKnown RBP15.74■□□□□ 0.11
SRP54-205ENST00000554803 NUTM2FA1L443 756 aa15.73■□□□□ 0.11
SRP54-205ENST00000554803 FAM98CQ17RN3 349 aaKnown RBP15.73■□□□□ 0.11
SRP54-205ENST00000554803 KRT28Q7Z3Y7 464 aa15.73■□□□□ 0.11
SRP54-205ENST00000554803 COL14A1Q05707 1796 aaKnown RBP15.72■□□□□ 0.11
SRP54-205ENST00000554803 CABLES1Q8TDN4 633 aa15.72■□□□□ 0.11
SRP54-205ENST00000554803 CAMTA1Q9Y6Y1 1673 aa15.72■□□□□ 0.11
SRP54-205ENST00000554803 TECPR2O15040 1411 aa15.71■□□□□ 0.11
SRP54-205ENST00000554803 CAMKK2Q96RR4 588 aa15.71■□□□□ 0.11
SRP54-205ENST00000554803 FAM182BQ5T319 152 aa15.7■□□□□ 0.1
SRP54-205ENST00000554803 PARD3Q8TEW0 1356 aa15.7■□□□□ 0.1
SRP54-205ENST00000554803 CHD4Q14839 1912 aa15.7■□□□□ 0.1
SRP54-205ENST00000554803 FAM83GA6ND36 823 aa15.69■□□□□ 0.1
SRP54-205ENST00000554803 IFFO2Q5TF58 517 aa15.69■□□□□ 0.1
SRP54-205ENST00000554803 NINLQ9Y2I6 1382 aa15.69■□□□□ 0.1
SRP54-205ENST00000554803 RPGRIP1LQ68CZ1 1315 aa15.68■□□□□ 0.1
SRP54-205ENST00000554803 SBNO1A3KN83 1393 aa15.68■□□□□ 0.1
SRP54-205ENST00000554803 DCAF8L1A6NGE4 600 aa15.68■□□□□ 0.1
SRP54-205ENST00000554803 ARHGEF10O15013 1369 aa15.67■□□□□ 0.1
SRP54-205ENST00000554803 PSME1Q06323 249 aa15.67■□□□□ 0.1
SRP54-205ENST00000554803 UTRNP46939 3433 aa15.66■□□□□ 0.1
SRP54-205ENST00000554803 WAPLQ7Z5K2 1190 aa15.66■□□□□ 0.1
SRP54-205ENST00000554803 TRPM3Q9HCF6 1732 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms