RNA–Protein interactions for RNA: ENST00000554639.5

MEG3-224, Transcript of maternally expressed 3, humanhuman

TSL 1 (best)

Gene MEG3, Length 1,712 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-224ENST00000554639 ESF1Q9H501 851 aaKnown RBP23.79■■□□□ 1.4
MEG3-224ENST00000554639 CGNL1Q0VF96 1302 aa23.79■■□□□ 1.4
MEG3-224ENST00000554639 RIMS2Q9UQ26 1411 aa23.78■■□□□ 1.4
MEG3-224ENST00000554639 SLC12A5Q9H2X9 1139 aa23.78■■□□□ 1.4
MEG3-224ENST00000554639 ZMYM3Q14202 1370 aa23.77■■□□□ 1.4
MEG3-224ENST00000554639 HDGFP51858 240 aaKnown RBP23.76■■□□□ 1.39
MEG3-224ENST00000554639 RCAN3Q9UKA8 241 aa23.76■■□□□ 1.39
MEG3-224ENST00000554639 SETD1AO15047 1707 aaKnown RBP23.74■■□□□ 1.39
MEG3-224ENST00000554639 MORC1Q86VD1 984 aa23.74■■□□□ 1.39
MEG3-224ENST00000554639 ZNF521Q96K83 1311 aa23.72■■□□□ 1.39
MEG3-224ENST00000554639 RRP1P56182 461 aaKnown RBP23.72■■□□□ 1.39
MEG3-224ENST00000554639 ABCC11Q96J66 1382 aa23.71■■□□□ 1.39
MEG3-224ENST00000554639 POGKQ9P215 609 aa23.7■■□□□ 1.39
MEG3-224ENST00000554639 MED14O60244 1454 aa23.7■■□□□ 1.39
MEG3-224ENST00000554639 BCL11AQ9H165 835 aa23.7■■□□□ 1.38
MEG3-224ENST00000554639 PRAM1Q96QH2 718 aa23.69■■□□□ 1.38
MEG3-224ENST00000554639 STK26Q9P289 416 aa23.69■■□□□ 1.38
MEG3-224ENST00000554639 TNRQ92752 1358 aa23.69■■□□□ 1.38
MEG3-224ENST00000554639 MLECQ14165 292 aa23.68■■□□□ 1.38
MEG3-224ENST00000554639 TERF2IPQ9NYB0 399 aa23.68■■□□□ 1.38
MEG3-224ENST00000554639 SIRT1Q96EB6 747 aa23.67■■□□□ 1.38
MEG3-224ENST00000554639 SALL2Q9Y467 1007 aaPredicted RBP23.67■■□□□ 1.38
MEG3-224ENST00000554639 KNDC1Q76NI1 1749 aa23.66■■□□□ 1.38
MEG3-224ENST00000554639 SRPK2P78362 688 aaKnown RBP23.66■■□□□ 1.38
MEG3-224ENST00000554639 GOLGA2Q08379 1002 aa23.66■■□□□ 1.38
MEG3-224ENST00000554639 NCBP3Q53F19 620 aaKnown RBP23.66■■□□□ 1.38
MEG3-224ENST00000554639 CFAP53Q96M91 514 aa23.66■■□□□ 1.38
MEG3-224ENST00000554639 CABP2Q9NPB3 220 aa23.66■■□□□ 1.38
MEG3-224ENST00000554639 NRXN3Q9Y4C0 1643 aa23.66■■□□□ 1.38
MEG3-224ENST00000554639 ANKRD26Q9UPS8 1709 aa23.66■■□□□ 1.38
MEG3-224ENST00000554639 SHPRHQ149N8 1683 aa23.65■■□□□ 1.38
MEG3-224ENST00000554639 PLEKHH1Q9ULM0 1364 aa23.65■■□□□ 1.38
MEG3-224ENST00000554639 CDCA7LQ96GN5 454 aa23.65■■□□□ 1.38
MEG3-224ENST00000554639 NLRP1Q9C000 1473 aa23.63■■□□□ 1.37
MEG3-224ENST00000554639 A0A1W2PP64 1363 aa23.63■■□□□ 1.37
MEG3-224ENST00000554639 UBR1Q8IWV7 1749 aa23.62■■□□□ 1.37
MEG3-224ENST00000554639 TECPR2O15040 1411 aa23.62■■□□□ 1.37
MEG3-224ENST00000554639 FAM135BQ49AJ0 1406 aa23.62■■□□□ 1.37
MEG3-224ENST00000554639 SENP3-EIF4A1A0A087X0R7 540 aa23.62■■□□□ 1.37
MEG3-224ENST00000554639 B4GALNT3Q6L9W6 998 aa23.61■■□□□ 1.37
MEG3-224ENST00000554639 ATP7BP35670 1465 aa23.6■■□□□ 1.37
MEG3-224ENST00000554639 HDGFL2Q7Z4V5 671 aaPredicted RBP23.6■■□□□ 1.37
MEG3-224ENST00000554639 TRMT2AQ8IZ69 625 aaKnown RBP23.6■■□□□ 1.37
MEG3-224ENST00000554639 MINK1Q8N4C8 1332 aaPredicted RBP23.6■■□□□ 1.37
MEG3-224ENST00000554639 DUSP27Q5VZP5 1158 aa23.59■■□□□ 1.37
MEG3-224ENST00000554639 CCDC136Q96JN2 1154 aa23.59■■□□□ 1.37
MEG3-224ENST00000554639 CD163L1Q9NR16 1453 aa23.59■■□□□ 1.37
MEG3-224ENST00000554639 SLFN5Q08AF3 891 aa23.59■■□□□ 1.37
MEG3-224ENST00000554639 SAFB2Q14151 953 aaKnown RBP eCLIP23.59■■□□□ 1.37
MEG3-224ENST00000554639 CDK19Q9BWU1 502 aa23.59■■□□□ 1.37
MEG3-224ENST00000554639 TMEM2Q9UHN6 1383 aa23.58■■□□□ 1.37
MEG3-224ENST00000554639 CPS1P31327 1500 aa23.57■■□□□ 1.36
MEG3-224ENST00000554639 E9PSI1 815 aa23.56■■□□□ 1.36
MEG3-224ENST00000554639 APAF1O14727 1248 aa23.56■■□□□ 1.36
MEG3-224ENST00000554639 RUNDC1Q96C34 613 aa23.56■■□□□ 1.36
MEG3-224ENST00000554639 MTHFSP49914 203 aa23.55■■□□□ 1.36
MEG3-224ENST00000554639 KIF20BQ96Q89 1820 aa23.53■■□□□ 1.36
MEG3-224ENST00000554639 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.53■■□□□ 1.36
MEG3-224ENST00000554639 CCDC146Q8IYE0 955 aa23.52■■□□□ 1.36
MEG3-224ENST00000554639 RBM19Q9Y4C8 960 aaKnown RBP23.52■■□□□ 1.36
MEG3-224ENST00000554639 NKTRP30414 1462 aaKnown RBP23.52■■□□□ 1.36
MEG3-224ENST00000554639 IQSEC2Q5JU85 1478 aa23.52■■□□□ 1.36
MEG3-224ENST00000554639 PLEKHG1Q9ULL1 1385 aa23.51■■□□□ 1.35
MEG3-224ENST00000554639 CCDC27Q2M243 656 aa23.5■■□□□ 1.35
MEG3-224ENST00000554639 METP08581 1390 aa23.5■■□□□ 1.35
MEG3-224ENST00000554639 FYB1O15117 783 aa23.49■■□□□ 1.35
MEG3-224ENST00000554639 WASLO00401 505 aaPredicted RBP23.47■■□□□ 1.35
MEG3-224ENST00000554639 PHF23Q9BUL5 403 aaPredicted RBP23.47■■□□□ 1.35
MEG3-224ENST00000554639 TNNT2P45379 298 aaPredicted RBP23.47■■□□□ 1.35
MEG3-224ENST00000554639 SLIT1O75093 1534 aa23.46■■□□□ 1.35
MEG3-224ENST00000554639 C3P01024 1663 aa23.46■■□□□ 1.35
MEG3-224ENST00000554639 ADGRB2O60241 1585 aa23.46■■□□□ 1.35
MEG3-224ENST00000554639 WAPLQ7Z5K2 1190 aa23.46■■□□□ 1.35
MEG3-224ENST00000554639 WDR63Q8IWG1 891 aa23.46■■□□□ 1.35
MEG3-224ENST00000554639 EXOC6Q8TAG9 804 aa23.46■■□□□ 1.35
MEG3-224ENST00000554639 CABP1Q9NZU7 370 aa23.46■■□□□ 1.35
MEG3-224ENST00000554639 CPSF1Q10570 1443 aaKnown RBP23.46■■□□□ 1.35
MEG3-224ENST00000554639 COL3A1P02461 1466 aaPredicted RBP23.45■■□□□ 1.35
MEG3-224ENST00000554639 WWC1Q8IX03 1113 aa23.45■■□□□ 1.34
MEG3-224ENST00000554639 ADAMTS13Q76LX8 1427 aa23.45■■□□□ 1.34
MEG3-224ENST00000554639 EDC4Q6P2E9 1401 aaKnown RBP23.44■■□□□ 1.34
MEG3-224ENST00000554639 ARHGAP23Q9P227 1491 aa23.44■■□□□ 1.34
MEG3-224ENST00000554639 FER1L4A9Z1Z3 1794 aa23.44■■□□□ 1.34
MEG3-224ENST00000554639 PNPLA6Q8IY17 1366 aa23.44■■□□□ 1.34
MEG3-224ENST00000554639 CDC42BPGQ6DT37 1551 aa23.44■■□□□ 1.34
MEG3-224ENST00000554639 PNNQ9H307 717 aaKnown RBP23.43■■□□□ 1.34
MEG3-224ENST00000554639 TCP11L2Q8N4U5 519 aa23.42■■□□□ 1.34
MEG3-224ENST00000554639 GGNBP2Q9H3C7 697 aa23.42■■□□□ 1.34
MEG3-224ENST00000554639 SENP3Q9H4L4 574 aaPredicted RBP23.42■■□□□ 1.34
MEG3-224ENST00000554639 DIP2AQ14689 1571 aa23.4■■□□□ 1.34
MEG3-224ENST00000554639 EID1Q9Y6B2 187 aa23.4■■□□□ 1.34
MEG3-224ENST00000554639 PPIP5K1Q6PFW1 1433 aa23.4■■□□□ 1.34
MEG3-224ENST00000554639 MON2Q7Z3U7 1717 aa23.39■■□□□ 1.34
MEG3-224ENST00000554639 CCDC61Q9Y6R9 512 aa23.39■■□□□ 1.33
MEG3-224ENST00000554639 U2AF1L5P0DN76 240 aaPredicted RBP23.38■■□□□ 1.33
MEG3-224ENST00000554639 U2AF1Q01081 240 aaKnown RBP eCLIP23.38■■□□□ 1.33
MEG3-224ENST00000554639 TXNDC2Q86VQ3 553 aa23.38■■□□□ 1.33
MEG3-224ENST00000554639 ZNF692Q9BU19 519 aaPredicted RBP23.38■■□□□ 1.33
MEG3-224ENST00000554639 AKAP12Q02952 1782 aa23.37■■□□□ 1.33
MEG3-224ENST00000554639 FANCIQ9NVI1 1328 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms