RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 ADGRB1O14514 1584 aa18.94■□□□□ 0.62
ACTN1-211ENST00000553882 MLH3Q9UHC1 1453 aa18.94■□□□□ 0.62
ACTN1-211ENST00000553882 OSCARQ8IYS5 282 aa18.94■□□□□ 0.62
ACTN1-211ENST00000553882 HECW2Q9P2P5 1572 aa18.94■□□□□ 0.62
ACTN1-211ENST00000553882 DAXXQ9UER7 740 aaPredicted RBP18.93■□□□□ 0.62
ACTN1-211ENST00000553882 ABCC3O15438 1527 aa18.92■□□□□ 0.62
ACTN1-211ENST00000553882 MTHFSP49914 203 aa18.92■□□□□ 0.62
ACTN1-211ENST00000553882 CANXP27824 592 aaKnown RBP18.91■□□□□ 0.62
ACTN1-211ENST00000553882 TCP11L2Q8N4U5 519 aa18.9■□□□□ 0.62
ACTN1-211ENST00000553882 CABP2Q9NPB3 220 aa18.9■□□□□ 0.62
ACTN1-211ENST00000553882 CGNL1Q0VF96 1302 aa18.9■□□□□ 0.62
ACTN1-211ENST00000553882 RPGRIP1LQ68CZ1 1315 aa18.9■□□□□ 0.62
ACTN1-211ENST00000553882 PANK1Q8TE04 598 aa18.89■□□□□ 0.62
ACTN1-211ENST00000553882 FRAT1Q92837 279 aaPredicted RBP18.89■□□□□ 0.62
ACTN1-211ENST00000553882 STK26Q9P289 416 aa18.89■□□□□ 0.61
ACTN1-211ENST00000553882 ZC3H13Q5T200 1668 aaKnown RBP18.89■□□□□ 0.61
ACTN1-211ENST00000553882 CFAP74Q9C0B2 1584 aa18.89■□□□□ 0.61
ACTN1-211ENST00000553882 RUNDC1Q96C34 613 aa18.88■□□□□ 0.61
ACTN1-211ENST00000553882 SIGLEC1Q9BZZ2 1709 aa18.88■□□□□ 0.61
ACTN1-211ENST00000553882 VGFO15240 615 aaPredicted RBP18.88■□□□□ 0.61
ACTN1-211ENST00000553882 NGEFQ8N5V2 710 aa18.88■□□□□ 0.61
ACTN1-211ENST00000553882 COG6Q9Y2V7 657 aa18.88■□□□□ 0.61
ACTN1-211ENST00000553882 C8orf34Q49A92 452 aa18.87■□□□□ 0.61
ACTN1-211ENST00000553882 SHPRHQ149N8 1683 aa18.87■□□□□ 0.61
ACTN1-211ENST00000553882 EVC2Q86UK5 1308 aa18.87■□□□□ 0.61
ACTN1-211ENST00000553882 SLC4A3P48751 1232 aa18.87■□□□□ 0.61
ACTN1-211ENST00000553882 FAM161AQ3B820 660 aa18.87■□□□□ 0.61
ACTN1-211ENST00000553882 GLI2P10070 1586 aa18.87■□□□□ 0.61
ACTN1-211ENST00000553882 IGHDP01880 384 aa18.87■□□□□ 0.61
ACTN1-211ENST00000553882 IDI1Q13907 227 aa18.87■□□□□ 0.61
ACTN1-211ENST00000553882 CAMSAP1Q5T5Y3 1602 aa18.86■□□□□ 0.61
ACTN1-211ENST00000553882 BCL2L13Q9BXK5 485 aa18.86■□□□□ 0.61
ACTN1-211ENST00000553882 NEFMP07197 916 aa18.85■□□□□ 0.61
ACTN1-211ENST00000553882 CFAP53Q96M91 514 aa18.84■□□□□ 0.61
ACTN1-211ENST00000553882 DDRGK1Q96HY6 314 aa18.84■□□□□ 0.61
ACTN1-211ENST00000553882 TULP4Q9NRJ4 1543 aa18.83■□□□□ 0.61
ACTN1-211ENST00000553882 U2AF1L5P0DN76 240 aaPredicted RBP18.83■□□□□ 0.61
ACTN1-211ENST00000553882 U2AF1Q01081 240 aaKnown RBP eCLIP18.83■□□□□ 0.61
ACTN1-211ENST00000553882 PDE3AQ14432 1141 aa18.83■□□□□ 0.6
ACTN1-211ENST00000553882 SRPK2P78362 688 aaKnown RBP18.82■□□□□ 0.6
ACTN1-211ENST00000553882 NEXMIFQ5QGS0 1516 aa18.82■□□□□ 0.6
ACTN1-211ENST00000553882 ANKRD36BQ8N2N9 1353 aa18.82■□□□□ 0.6
ACTN1-211ENST00000553882 CLUAP1Q96AJ1 413 aa18.82■□□□□ 0.6
ACTN1-211ENST00000553882 TNNQ9UQP3 1299 aa18.82■□□□□ 0.6
ACTN1-211ENST00000553882 RARSP54136 660 aaKnown RBP18.81■□□□□ 0.6
ACTN1-211ENST00000553882 ARHGEF28Q8N1W1 1705 aaKnown RBP18.81■□□□□ 0.6
ACTN1-211ENST00000553882 IQSEC2Q5JU85 1478 aa18.81■□□□□ 0.6
ACTN1-211ENST00000553882 DIP2CQ9Y2E4 1556 aa18.79■□□□□ 0.6
ACTN1-211ENST00000553882 GGNBP2Q9H3C7 697 aa18.79■□□□□ 0.6
ACTN1-211ENST00000553882 YEATS2Q9ULM3 1422 aa18.79■□□□□ 0.6
ACTN1-211ENST00000553882 PIK3C2BO00750 1634 aa18.79■□□□□ 0.6
ACTN1-211ENST00000553882 PHF23Q9BUL5 403 aaPredicted RBP18.79■□□□□ 0.6
ACTN1-211ENST00000553882 RLBP1P12271 317 aa18.78■□□□□ 0.6
ACTN1-211ENST00000553882 NEO1Q92859 1461 aa18.78■□□□□ 0.6
ACTN1-211ENST00000553882 MINK1Q8N4C8 1332 aaPredicted RBP18.78■□□□□ 0.6
ACTN1-211ENST00000553882 A0A1W2PP64 1363 aa18.78■□□□□ 0.6
ACTN1-211ENST00000553882 WDR63Q8IWG1 891 aa18.77■□□□□ 0.6
ACTN1-211ENST00000553882 U2SURPO15042 1029 aaKnown RBP18.77■□□□□ 0.6
ACTN1-211ENST00000553882 USP32Q8NFA0 1604 aa18.77■□□□□ 0.59
ACTN1-211ENST00000553882 PRAM1Q96QH2 718 aa18.75■□□□□ 0.59
ACTN1-211ENST00000553882 NINLQ9Y2I6 1382 aa18.75■□□□□ 0.59
ACTN1-211ENST00000553882 PPM1GO15355 546 aaPredicted RBP18.75■□□□□ 0.59
ACTN1-211ENST00000553882 SLC52A1Q9NWF4 448 aa18.75■□□□□ 0.59
ACTN1-211ENST00000553882 FBXO31Q5XUX0 539 aaPredicted RBP18.74■□□□□ 0.59
ACTN1-211ENST00000553882 TSR2Q969E8 191 aaKnown RBP18.74■□□□□ 0.59
ACTN1-211ENST00000553882 PUS7Q96PZ0 661 aaKnown RBP18.74■□□□□ 0.59
ACTN1-211ENST00000553882 NSD2O96028 1365 aa18.74■□□□□ 0.59
ACTN1-211ENST00000553882 POGKQ9P215 609 aa18.73■□□□□ 0.59
ACTN1-211ENST00000553882 MYO5BQ9ULV0 1848 aa18.73■□□□□ 0.59
ACTN1-211ENST00000553882 PCDHB15Q9Y5E8 787 aa18.73■□□□□ 0.59
ACTN1-211ENST00000553882 CCDC27Q2M243 656 aa18.72■□□□□ 0.59
ACTN1-211ENST00000553882 ARHGAP31Q2M1Z3 1444 aa18.72■□□□□ 0.59
ACTN1-211ENST00000553882 MYH16Q9H6N6 1097 aa18.72■□□□□ 0.59
ACTN1-211ENST00000553882 ABCC11Q96J66 1382 aa18.71■□□□□ 0.59
ACTN1-211ENST00000553882 USP35Q9P2H5 1018 aa18.7■□□□□ 0.58
ACTN1-211ENST00000553882 RICTORQ6R327 1708 aa18.7■□□□□ 0.58
ACTN1-211ENST00000553882 FYB1O15117 783 aa18.7■□□□□ 0.58
ACTN1-211ENST00000553882 SEC24BO95487 1268 aa18.69■□□□□ 0.58
ACTN1-211ENST00000553882 STAG3Q9UJ98 1225 aa18.69■□□□□ 0.58
ACTN1-211ENST00000553882 TERF2IPQ9NYB0 399 aa18.68■□□□□ 0.58
ACTN1-211ENST00000553882 PTPRMP28827 1452 aa18.68■□□□□ 0.58
ACTN1-211ENST00000553882 MAPK8IP3Q9UPT6 1336 aa18.68■□□□□ 0.58
ACTN1-211ENST00000553882 ZFYVE9O95405 1425 aa18.67■□□□□ 0.58
ACTN1-211ENST00000553882 TMPOP42166 694 aaKnown RBP18.67■□□□□ 0.58
ACTN1-211ENST00000553882 NFKBIBQ15653 356 aa18.67■□□□□ 0.58
ACTN1-211ENST00000553882 CYB5RLQ6IPT4 315 aa18.67■□□□□ 0.58
ACTN1-211ENST00000553882 PLEKHF1Q96S99 279 aa18.67■□□□□ 0.58
ACTN1-211ENST00000553882 YTHDC2Q9H6S0 1430 aaKnown RBP18.67■□□□□ 0.58
ACTN1-211ENST00000553882 EXOSC9Q06265 439 aaKnown RBP18.66■□□□□ 0.58
ACTN1-211ENST00000553882 FTSJ3Q8IY81 847 aaKnown RBP18.66■□□□□ 0.58
ACTN1-211ENST00000553882 PMFBP1Q8TBY8 1022 aa18.66■□□□□ 0.58
ACTN1-211ENST00000553882 ATAD2Q6PL18 1390 aa18.66■□□□□ 0.58
ACTN1-211ENST00000553882 TMEM131LA2VDJ0 1609 aa18.65■□□□□ 0.58
ACTN1-211ENST00000553882 PREX1Q8TCU6 1659 aa18.65■□□□□ 0.58
ACTN1-211ENST00000553882 FBLN1P23142 703 aa18.65■□□□□ 0.58
ACTN1-211ENST00000553882 CABP1Q9NZU7 370 aa18.65■□□□□ 0.58
ACTN1-211ENST00000553882 CDK19Q9BWU1 502 aa18.65■□□□□ 0.58
ACTN1-211ENST00000553882 SMC4Q9NTJ3 1288 aa18.65■□□□□ 0.58
ACTN1-211ENST00000553882 TRIM35Q9UPQ4 493 aa18.65■□□□□ 0.58
ACTN1-211ENST00000553882 USP19O94966 1318 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms