RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 QTRT2Q9H974 415 aaKnown RBP14.72□□□□□ -0.05
ACTN1-210ENST00000553779 COL22A1Q8NFW1 1626 aaPredicted RBP14.72□□□□□ -0.05
ACTN1-210ENST00000553779 PRAG1Q86YV5 1406 aa14.72□□□□□ -0.05
ACTN1-210ENST00000553779 FMN2Q9NZ56 1722 aa14.72□□□□□ -0.05
ACTN1-210ENST00000553779 KIF1AQ12756 1690 aa14.71□□□□□ -0.05
ACTN1-210ENST00000553779 RGPD8O14715 1765 aaPredicted RBP14.71□□□□□ -0.05
ACTN1-210ENST00000553779 RBM6P78332 1123 aaKnown RBP14.71□□□□□ -0.05
ACTN1-210ENST00000553779 UPF1Q92900 1129 aaKnown RBP eCLIP14.71□□□□□ -0.05
ACTN1-210ENST00000553779 ANKRD30BQ9BXX2 1392 aa14.71□□□□□ -0.06
ACTN1-210ENST00000553779 NPHP3Q7Z494 1330 aa14.7□□□□□ -0.06
ACTN1-210ENST00000553779 RGS12O14924 1447 aa14.7□□□□□ -0.06
ACTN1-210ENST00000553779 NUTM2FA1L443 756 aa14.69□□□□□ -0.06
ACTN1-210ENST00000553779 LRPPRCP42704 1394 aaKnown RBP14.69□□□□□ -0.06
ACTN1-210ENST00000553779 SOS2Q07890 1332 aaPredicted RBP14.68□□□□□ -0.06
ACTN1-210ENST00000553779 ADGRF5Q8IZF2 1346 aa14.68□□□□□ -0.06
ACTN1-210ENST00000553779 MPHOSPH9Q99550 1183 aa14.68□□□□□ -0.06
ACTN1-210ENST00000553779 USP21Q9UK80 565 aa14.68□□□□□ -0.06
ACTN1-210ENST00000553779 XPCQ01831 940 aaPredicted RBP14.67□□□□□ -0.06
ACTN1-210ENST00000553779 SPATA31E1Q6ZUB1 1445 aa14.66□□□□□ -0.06
ACTN1-210ENST00000553779 TRPC5Q9UL62 973 aaPredicted RBP14.66□□□□□ -0.06
ACTN1-210ENST00000553779 TECPR2O15040 1411 aa14.66□□□□□ -0.06
ACTN1-210ENST00000553779 PIK3C2GO75747 1445 aa14.66□□□□□ -0.06
ACTN1-210ENST00000553779 ACIN1Q9UKV3 1341 aaKnown RBP14.66□□□□□ -0.06
ACTN1-210ENST00000553779 PXDNQ92626 1479 aa14.65□□□□□ -0.06
ACTN1-210ENST00000553779 ATAD2Q6PL18 1390 aa14.65□□□□□ -0.06
ACTN1-210ENST00000553779 HAP1P54257 671 aaPredicted RBP14.65□□□□□ -0.06
ACTN1-210ENST00000553779 WAPLQ7Z5K2 1190 aa14.65□□□□□ -0.06
ACTN1-210ENST00000553779 YTHDC2Q9H6S0 1430 aaKnown RBP14.65□□□□□ -0.06
ACTN1-210ENST00000553779 FOXO3O43524 673 aa14.64□□□□□ -0.07
ACTN1-210ENST00000553779 TMEM132EQ6IEE7 984 aa14.64□□□□□ -0.07
ACTN1-210ENST00000553779 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.63□□□□□ -0.07
ACTN1-210ENST00000553779 MYOM2P54296 1465 aa14.63□□□□□ -0.07
ACTN1-210ENST00000553779 EP400Q96L91 3159 aa14.62□□□□□ -0.07
ACTN1-210ENST00000553779 ABCC11Q96J66 1382 aa14.61□□□□□ -0.07
ACTN1-210ENST00000553779 PLEKHH1Q9ULM0 1364 aa14.61□□□□□ -0.07
ACTN1-210ENST00000553779 PLEKHG5O94827 1062 aa14.61□□□□□ -0.07
ACTN1-210ENST00000553779 USP32Q8NFA0 1604 aa14.61□□□□□ -0.07
ACTN1-210ENST00000553779 DHX57Q6P158 1386 aaKnown RBP14.6□□□□□ -0.07
ACTN1-210ENST00000553779 ATRNO75882 1429 aa14.6□□□□□ -0.07
ACTN1-210ENST00000553779 SAFB2Q14151 953 aaKnown RBP eCLIP14.6□□□□□ -0.07
ACTN1-210ENST00000553779 PLCH1Q4KWH8 1693 aa14.6□□□□□ -0.07
ACTN1-210ENST00000553779 ABCA3Q99758 1704 aa14.59□□□□□ -0.07
ACTN1-210ENST00000553779 LMOD2Q6P5Q4 547 aa14.59□□□□□ -0.07
ACTN1-210ENST00000553779 POGKQ9P215 609 aa14.59□□□□□ -0.07
ACTN1-210ENST00000553779 BRWD3Q6RI45 1802 aa14.58□□□□□ -0.08
ACTN1-210ENST00000553779 PSME1Q06323 249 aa14.57□□□□□ -0.08
ACTN1-210ENST00000553779 FNBP4Q8N3X1 1017 aaPredicted RBP14.57□□□□□ -0.08
ACTN1-210ENST00000553779 NWD2Q9ULI1 1742 aa14.57□□□□□ -0.08
ACTN1-210ENST00000553779 TNS3Q68CZ2 1445 aa14.57□□□□□ -0.08
ACTN1-210ENST00000553779 ITSN1Q15811 1721 aa14.56□□□□□ -0.08
ACTN1-210ENST00000553779 KRT28Q7Z3Y7 464 aa14.56□□□□□ -0.08
ACTN1-210ENST00000553779 PHF8Q9UPP1 1060 aa14.56□□□□□ -0.08
ACTN1-210ENST00000553779 RAB3GAP2Q9H2M9 1393 aa14.56□□□□□ -0.08
ACTN1-210ENST00000553779 CFAP70Q5T0N1 1121 aa14.55□□□□□ -0.08
ACTN1-210ENST00000553779 PRAM1Q96QH2 718 aa14.55□□□□□ -0.08
ACTN1-210ENST00000553779 NRXN1Q9ULB1 1477 aa14.55□□□□□ -0.08
ACTN1-210ENST00000553779 C14orf93Q9H972 538 aaKnown RBP14.54□□□□□ -0.08
ACTN1-210ENST00000553779 CCDC9Q9Y3X0 531 aaKnown RBP14.54□□□□□ -0.08
ACTN1-210ENST00000553779 SPATA31A3Q5VYP0 1347 aa14.54□□□□□ -0.08
ACTN1-210ENST00000553779 DLC1Q96QB1 1528 aa14.54□□□□□ -0.08
ACTN1-210ENST00000553779 ADGRB2O60241 1585 aa14.53□□□□□ -0.08
ACTN1-210ENST00000553779 BCL9LQ86UU0 1499 aa14.53□□□□□ -0.08
ACTN1-210ENST00000553779 EIF3AQ14152 1382 aaKnown RBP14.53□□□□□ -0.08
ACTN1-210ENST00000553779 ARHGEF10O15013 1369 aa14.52□□□□□ -0.08
ACTN1-210ENST00000553779 A0A0G2JS52 829 aa14.52□□□□□ -0.09
ACTN1-210ENST00000553779 MYT1Q01538 1121 aa14.52□□□□□ -0.09
ACTN1-210ENST00000553779 UNC5CLQ8IV45 518 aa14.52□□□□□ -0.09
ACTN1-210ENST00000553779 GJD4Q96KN9 370 aaPredicted RBP14.52□□□□□ -0.09
ACTN1-210ENST00000553779 GLI3P10071 1580 aa14.51□□□□□ -0.09
ACTN1-210ENST00000553779 RALGAPBQ86X10 1494 aa14.51□□□□□ -0.09
ACTN1-210ENST00000553779 ANKARQ7Z5J8 1434 aa14.51□□□□□ -0.09
ACTN1-210ENST00000553779 SIRT1Q96EB6 747 aa14.51□□□□□ -0.09
ACTN1-210ENST00000553779 KDM2AQ9Y2K7 1162 aa14.51□□□□□ -0.09
ACTN1-210ENST00000553779 ARHGEF28Q8N1W1 1705 aaKnown RBP14.5□□□□□ -0.09
ACTN1-210ENST00000553779 PMFBP1Q8TBY8 1022 aa14.5□□□□□ -0.09
ACTN1-210ENST00000553779 ZRANB1Q9UGI0 708 aa14.5□□□□□ -0.09
ACTN1-210ENST00000553779 TRAK1Q9UPV9 953 aa14.5□□□□□ -0.09
ACTN1-210ENST00000553779 TRPM3Q9HCF6 1732 aaPredicted RBP14.49□□□□□ -0.09
ACTN1-210ENST00000553779 GPRASP1Q5JY77 1395 aa14.49□□□□□ -0.09
ACTN1-210ENST00000553779 MINK1Q8N4C8 1332 aaPredicted RBP14.49□□□□□ -0.09
ACTN1-210ENST00000553779 SF3B2Q13435 895 aaKnown RBP14.49□□□□□ -0.09
ACTN1-210ENST00000553779 CABLES1Q8TDN4 633 aa14.49□□□□□ -0.09
ACTN1-210ENST00000553779 DCAF11Q8TEB1 546 aa14.49□□□□□ -0.09
ACTN1-210ENST00000553779 HIRIP3Q9BW71 556 aaPredicted RBP14.49□□□□□ -0.09
ACTN1-210ENST00000553779 SLIT2O94813 1529 aa14.49□□□□□ -0.09
ACTN1-210ENST00000553779 SBNO1A3KN83 1393 aa14.48□□□□□ -0.09
ACTN1-210ENST00000553779 SRCAPQ6ZRS2 3230 aa14.48□□□□□ -0.09
ACTN1-210ENST00000553779 CCDC125Q86Z20 511 aa14.48□□□□□ -0.09
ACTN1-210ENST00000553779 ADGRB1O14514 1584 aa14.47□□□□□ -0.09
ACTN1-210ENST00000553779 COL14A1Q05707 1796 aaKnown RBP14.47□□□□□ -0.09
ACTN1-210ENST00000553779 TULP4Q9NRJ4 1543 aa14.47□□□□□ -0.09
ACTN1-210ENST00000553779 ALS2Q96Q42 1657 aa14.47□□□□□ -0.09
ACTN1-210ENST00000553779 NRAPQ86VF7 1730 aa14.46□□□□□ -0.09
ACTN1-210ENST00000553779 PAK3O75914 559 aaPredicted RBP14.45□□□□□ -0.1
ACTN1-210ENST00000553779 NGDNQ8NEJ9 315 aaKnown RBP14.45□□□□□ -0.1
ACTN1-210ENST00000553779 BLMP54132 1417 aaPredicted RBP14.44□□□□□ -0.1
ACTN1-210ENST00000553779 VPS72Q15906 364 aa14.43□□□□□ -0.1
ACTN1-210ENST00000553779 SEPT12Q8IYM1 358 aa14.43□□□□□ -0.1
ACTN1-210ENST00000553779 RGPD1P0DJD0 1748 aa14.42□□□□□ -0.1
ACTN1-210ENST00000553779 KIAA1210Q9ULL0 1709 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms