RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 MINK1Q8N4C8 1332 aaPredicted RBP18.99■□□□□ 0.63
APEX1-205ENST00000553555 PUS7Q96PZ0 661 aaKnown RBP18.99■□□□□ 0.63
APEX1-205ENST00000553555 XRN1Q8IZH2 1706 aaKnown RBP18.99■□□□□ 0.63
APEX1-205ENST00000553555 MYOM1P52179 1685 aa18.99■□□□□ 0.63
APEX1-205ENST00000553555 ROBO2Q9HCK4 1378 aa18.98■□□□□ 0.63
APEX1-205ENST00000553555 HSPA2P54652 639 aa18.98■□□□□ 0.63
APEX1-205ENST00000553555 PTCH1Q13635 1447 aa18.95■□□□□ 0.62
APEX1-205ENST00000553555 STRCQ7RTU9 1775 aa18.94■□□□□ 0.62
APEX1-205ENST00000553555 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.94■□□□□ 0.62
APEX1-205ENST00000553555 ANP32CO43423 234 aa18.93■□□□□ 0.62
APEX1-205ENST00000553555 KCNA6P17658 529 aa18.92■□□□□ 0.62
APEX1-205ENST00000553555 PANK3Q9H999 370 aa18.92■□□□□ 0.62
APEX1-205ENST00000553555 CDK19Q9BWU1 502 aa18.92■□□□□ 0.62
APEX1-205ENST00000553555 CABP2Q9NPB3 220 aa18.92■□□□□ 0.62
APEX1-205ENST00000553555 PER1O15534 1290 aaPredicted RBP18.9■□□□□ 0.62
APEX1-205ENST00000553555 SRPK2P78362 688 aaKnown RBP18.9■□□□□ 0.62
APEX1-205ENST00000553555 WASLO00401 505 aaPredicted RBP18.89■□□□□ 0.62
APEX1-205ENST00000553555 ADGRB2O60241 1585 aa18.89■□□□□ 0.61
APEX1-205ENST00000553555 NWD1Q149M9 1564 aa18.88■□□□□ 0.61
APEX1-205ENST00000553555 ATAD2Q6PL18 1390 aa18.87■□□□□ 0.61
APEX1-205ENST00000553555 TMC1Q8TDI8 760 aa18.87■□□□□ 0.61
APEX1-205ENST00000553555 SLC12A5Q9H2X9 1139 aa18.87■□□□□ 0.61
APEX1-205ENST00000553555 PRKRIP1Q9H875 184 aaPredicted RBP18.85■□□□□ 0.61
APEX1-205ENST00000553555 NINLQ9Y2I6 1382 aa18.84■□□□□ 0.61
APEX1-205ENST00000553555 STRCP1A6NGW2 1772 aa18.83■□□□□ 0.6
APEX1-205ENST00000553555 CARD14Q9BXL6 1004 aa18.82■□□□□ 0.6
APEX1-205ENST00000553555 KNSTRNQ9Y448 316 aa18.82■□□□□ 0.6
APEX1-205ENST00000553555 NUDT16Q96DE0 195 aaKnown RBP18.81■□□□□ 0.6
APEX1-205ENST00000553555 NALCNQ8IZF0 1738 aa18.8■□□□□ 0.6
APEX1-205ENST00000553555 CCER2I3L3R5 266 aa18.8■□□□□ 0.6
APEX1-205ENST00000553555 NKTRP30414 1462 aaKnown RBP18.79■□□□□ 0.6
APEX1-205ENST00000553555 ANKRD36BQ8N2N9 1353 aa18.79■□□□□ 0.6
APEX1-205ENST00000553555 CABP1Q9NZU7 370 aa18.79■□□□□ 0.6
APEX1-205ENST00000553555 RGPD8O14715 1765 aaPredicted RBP18.78■□□□□ 0.6
APEX1-205ENST00000553555 ATP7BP35670 1465 aa18.78■□□□□ 0.6
APEX1-205ENST00000553555 PRR36Q9H6K5 1346 aa18.78■□□□□ 0.6
APEX1-205ENST00000553555 CNGB1Q14028 1251 aaPredicted RBP18.78■□□□□ 0.6
APEX1-205ENST00000553555 AMER1Q5JTC6 1135 aaPredicted RBP18.78■□□□□ 0.6
APEX1-205ENST00000553555 PROSER2Q86WR7 435 aaPredicted RBP18.78■□□□□ 0.6
APEX1-205ENST00000553555 CCDC61Q9Y6R9 512 aa18.78■□□□□ 0.6
APEX1-205ENST00000553555 FMN2Q9NZ56 1722 aa18.77■□□□□ 0.6
APEX1-205ENST00000553555 KTN1Q86UP2 1357 aaKnown RBP18.77■□□□□ 0.6
APEX1-205ENST00000553555 CD163L1Q9NR16 1453 aa18.77■□□□□ 0.59
APEX1-205ENST00000553555 TOPAZ1Q8N9V7 1692 aa18.77■□□□□ 0.59
APEX1-205ENST00000553555 USP32Q8NFA0 1604 aa18.76■□□□□ 0.59
APEX1-205ENST00000553555 RALBP1Q15311 655 aa18.76■□□□□ 0.59
APEX1-205ENST00000553555 RBM33Q96EV2 1170 aaKnown RBP18.76■□□□□ 0.59
APEX1-205ENST00000553555 TERF2IPQ9NYB0 399 aa18.76■□□□□ 0.59
APEX1-205ENST00000553555 PPIP5K1Q6PFW1 1433 aa18.76■□□□□ 0.59
APEX1-205ENST00000553555 ADGRL3Q9HAR2 1447 aa18.76■□□□□ 0.59
APEX1-205ENST00000553555 NPC1L1Q9UHC9 1359 aa18.76■□□□□ 0.59
APEX1-205ENST00000553555 NSD3Q9BZ95 1437 aa18.75■□□□□ 0.59
APEX1-205ENST00000553555 CDC42BPGQ6DT37 1551 aa18.75■□□□□ 0.59
APEX1-205ENST00000553555 ITSN1Q15811 1721 aa18.75■□□□□ 0.59
APEX1-205ENST00000553555 A0A1W2PP64 1363 aa18.75■□□□□ 0.59
APEX1-205ENST00000553555 CC2D1BQ5T0F9 858 aaKnown RBP18.74■□□□□ 0.59
APEX1-205ENST00000553555 DMRT2Q9Y5R5 561 aa18.74■□□□□ 0.59
APEX1-205ENST00000553555 PARD3Q8TEW0 1356 aa18.74■□□□□ 0.59
APEX1-205ENST00000553555 HDGFL2Q7Z4V5 671 aaPredicted RBP18.74■□□□□ 0.59
APEX1-205ENST00000553555 AKAP12Q02952 1782 aa18.73■□□□□ 0.59
APEX1-205ENST00000553555 NUTM2FA1L443 756 aa18.73■□□□□ 0.59
APEX1-205ENST00000553555 ANKARQ7Z5J8 1434 aa18.72■□□□□ 0.59
APEX1-205ENST00000553555 PLEKHG3A1L390 1219 aa18.71■□□□□ 0.59
APEX1-205ENST00000553555 CPSF1Q10570 1443 aaKnown RBP18.71■□□□□ 0.59
APEX1-205ENST00000553555 NCOA3Q9Y6Q9 1424 aa18.71■□□□□ 0.59
APEX1-205ENST00000553555 C14orf37Q86TY3 774 aa18.71■□□□□ 0.58
APEX1-205ENST00000553555 XIRP1Q702N8 1843 aaKnown RBP18.7■□□□□ 0.58
APEX1-205ENST00000553555 MON2Q7Z3U7 1717 aa18.7■□□□□ 0.58
APEX1-205ENST00000553555 TMEM94Q12767 1356 aa18.69■□□□□ 0.58
APEX1-205ENST00000553555 CGNL1Q0VF96 1302 aa18.69■□□□□ 0.58
APEX1-205ENST00000553555 MYBBP1AQ9BQG0 1328 aaKnown RBP18.69■□□□□ 0.58
APEX1-205ENST00000553555 ZNF692Q9BU19 519 aaPredicted RBP18.68■□□□□ 0.58
APEX1-205ENST00000553555 C19orf44Q9H6X5 657 aa18.68■□□□□ 0.58
APEX1-205ENST00000553555 ZNF335Q9H4Z2 1342 aaPredicted RBP18.68■□□□□ 0.58
APEX1-205ENST00000553555 CCDC184Q52MB2 194 aa18.67■□□□□ 0.58
APEX1-205ENST00000553555 KIF20BQ96Q89 1820 aa18.66■□□□□ 0.58
APEX1-205ENST00000553555 ACEP12821 1306 aa18.66■□□□□ 0.58
APEX1-205ENST00000553555 NSD2O96028 1365 aa18.65■□□□□ 0.58
APEX1-205ENST00000553555 ANKRD26Q9UPS8 1709 aa18.65■□□□□ 0.58
APEX1-205ENST00000553555 LRRC7Q96NW7 1537 aa18.64■□□□□ 0.58
APEX1-205ENST00000553555 EDC4Q6P2E9 1401 aaKnown RBP18.64■□□□□ 0.57
APEX1-205ENST00000553555 PMFBP1Q8TBY8 1022 aa18.63■□□□□ 0.57
APEX1-205ENST00000553555 POLR3AO14802 1390 aaPredicted RBP18.63■□□□□ 0.57
APEX1-205ENST00000553555 FYB1O15117 783 aa18.63■□□□□ 0.57
APEX1-205ENST00000553555 MRS2Q9HD23 443 aa18.63■□□□□ 0.57
APEX1-205ENST00000553555 MORC1Q86VD1 984 aa18.62■□□□□ 0.57
APEX1-205ENST00000553555 NLRP13Q86W25 1043 aa18.62■□□□□ 0.57
APEX1-205ENST00000553555 BRD4O60885 1362 aaPredicted RBP18.62■□□□□ 0.57
APEX1-205ENST00000553555 DCCP43146 1447 aa18.62■□□□□ 0.57
APEX1-205ENST00000553555 PPP2R1AP30153 589 aa18.61■□□□□ 0.57
APEX1-205ENST00000553555 NGDNQ8NEJ9 315 aaKnown RBP18.61■□□□□ 0.57
APEX1-205ENST00000553555 NRKQ7Z2Y5 1582 aa18.6■□□□□ 0.57
APEX1-205ENST00000553555 USP6P35125 1406 aa18.6■□□□□ 0.57
APEX1-205ENST00000553555 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.6■□□□□ 0.57
APEX1-205ENST00000553555 PHF8Q9UPP1 1060 aa18.6■□□□□ 0.57
APEX1-205ENST00000553555 ATF3P18847 181 aa18.6■□□□□ 0.57
APEX1-205ENST00000553555 GGNBP2Q9H3C7 697 aa18.6■□□□□ 0.57
APEX1-205ENST00000553555 MSH6P52701 1360 aa18.59■□□□□ 0.57
APEX1-205ENST00000553555 SSH2Q76I76 1423 aa18.58■□□□□ 0.57
APEX1-205ENST00000553555 TTC21BQ7Z4L5 1316 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms