RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 LRRC59Q96AG4 307 aaKnown RBP23.31■■□□□ 1.32
CDK4-215ENST00000553237 KDM2AQ9Y2K7 1162 aa23.31■■□□□ 1.32
CDK4-215ENST00000553237 YTHDC2Q9H6S0 1430 aaKnown RBP23.31■■□□□ 1.32
CDK4-215ENST00000553237 TECPR2O15040 1411 aa23.3■■□□□ 1.32
CDK4-215ENST00000553237 NHSL1Q5SYE7 1610 aa23.3■■□□□ 1.32
CDK4-215ENST00000553237 NUTM2FA1L443 756 aa23.29■■□□□ 1.32
CDK4-215ENST00000553237 MYOM2P54296 1465 aa23.29■■□□□ 1.32
CDK4-215ENST00000553237 NRXN1Q9ULB1 1477 aa23.29■■□□□ 1.32
CDK4-215ENST00000553237 SHPRHQ149N8 1683 aa23.28■■□□□ 1.32
CDK4-215ENST00000553237 ESCO1Q5FWF5 840 aa23.27■■□□□ 1.32
CDK4-215ENST00000553237 DCAF11Q8TEB1 546 aa23.27■■□□□ 1.32
CDK4-215ENST00000553237 DHX57Q6P158 1386 aaKnown RBP23.27■■□□□ 1.31
CDK4-215ENST00000553237 CDC42BPGQ6DT37 1551 aa23.23■■□□□ 1.31
CDK4-215ENST00000553237 SAFB2Q14151 953 aaKnown RBP eCLIP23.23■■□□□ 1.31
CDK4-215ENST00000553237 SIRT1Q96EB6 747 aa23.23■■□□□ 1.31
CDK4-215ENST00000553237 SOS2Q07890 1332 aaPredicted RBP23.23■■□□□ 1.31
CDK4-215ENST00000553237 PNPLA6Q8IY17 1366 aa23.23■■□□□ 1.31
CDK4-215ENST00000553237 KNDC1Q76NI1 1749 aa23.22■■□□□ 1.31
CDK4-215ENST00000553237 PRAM1Q96QH2 718 aa23.21■■□□□ 1.31
CDK4-215ENST00000553237 FOXO3O43524 673 aa23.2■■□□□ 1.3
CDK4-215ENST00000553237 XPCQ01831 940 aaPredicted RBP23.19■■□□□ 1.3
CDK4-215ENST00000553237 ZNF772Q68DY9 489 aaPredicted RBP23.19■■□□□ 1.3
CDK4-215ENST00000553237 POGKQ9P215 609 aa23.19■■□□□ 1.3
CDK4-215ENST00000553237 LAMC1P11047 1609 aa23.19■■□□□ 1.3
CDK4-215ENST00000553237 TRAK1Q9UPV9 953 aa23.18■■□□□ 1.3
CDK4-215ENST00000553237 NPHP3Q7Z494 1330 aa23.17■■□□□ 1.3
CDK4-215ENST00000553237 ADAMTS2O95450 1211 aa23.16■■□□□ 1.3
CDK4-215ENST00000553237 STAC3Q96MF2 364 aa23.16■■□□□ 1.3
CDK4-215ENST00000553237 C8orf37Q96NL8 207 aa23.16■■□□□ 1.3
CDK4-215ENST00000553237 AFF2P51816 1311 aa23.14■■□□□ 1.3
CDK4-215ENST00000553237 ADGRB1O14514 1584 aa23.13■■□□□ 1.29
CDK4-215ENST00000553237 FMN2Q9NZ56 1722 aa23.11■■□□□ 1.29
CDK4-215ENST00000553237 HIRIP3Q9BW71 556 aaPredicted RBP23.11■■□□□ 1.29
CDK4-215ENST00000553237 DLC1Q96QB1 1528 aa23.1■■□□□ 1.29
CDK4-215ENST00000553237 NGLY1Q96IV0 654 aa23.1■■□□□ 1.29
CDK4-215ENST00000553237 PXDNQ92626 1479 aa23.1■■□□□ 1.29
CDK4-215ENST00000553237 PHF8Q9UPP1 1060 aa23.09■■□□□ 1.29
CDK4-215ENST00000553237 MINK1Q8N4C8 1332 aaPredicted RBP23.08■■□□□ 1.29
CDK4-215ENST00000553237 RXRBP28702 533 aa23.08■■□□□ 1.29
CDK4-215ENST00000553237 KRT28Q7Z3Y7 464 aa23.07■■□□□ 1.28
CDK4-215ENST00000553237 QTRT2Q9H974 415 aaKnown RBP23.05■■□□□ 1.28
CDK4-215ENST00000553237 PMFBP1Q8TBY8 1022 aa23.03■■□□□ 1.28
CDK4-215ENST00000553237 RGPD8O14715 1765 aaPredicted RBP23.03■■□□□ 1.28
CDK4-215ENST00000553237 SPATA31A3Q5VYP0 1347 aa23.02■■□□□ 1.28
CDK4-215ENST00000553237 KIF1AQ12756 1690 aa23.01■■□□□ 1.27
CDK4-215ENST00000553237 PSME1Q06323 249 aa23.01■■□□□ 1.27
CDK4-215ENST00000553237 SIN3AQ96ST3 1273 aa23.01■■□□□ 1.27
CDK4-215ENST00000553237 COL22A1Q8NFW1 1626 aaPredicted RBP23■■□□□ 1.27
CDK4-215ENST00000553237 WASLO00401 505 aaPredicted RBP23■■□□□ 1.27
CDK4-215ENST00000553237 PLEKHG5O94827 1062 aa23■■□□□ 1.27
CDK4-215ENST00000553237 NBPF1Q3BBV0 1214 aa23■■□□□ 1.27
CDK4-215ENST00000553237 USP21Q9UK80 565 aa23■■□□□ 1.27
CDK4-215ENST00000553237 ANKARQ7Z5J8 1434 aa22.99■■□□□ 1.27
CDK4-215ENST00000553237 RBM6P78332 1123 aaKnown RBP22.98■■□□□ 1.27
CDK4-215ENST00000553237 NEUROD1Q13562 356 aa22.98■■□□□ 1.27
CDK4-215ENST00000553237 LMOD2Q6P5Q4 547 aa22.98■■□□□ 1.27
CDK4-215ENST00000553237 PRR36Q9H6K5 1346 aa22.98■■□□□ 1.27
CDK4-215ENST00000553237 ADGRB2O60241 1585 aa22.97■■□□□ 1.27
CDK4-215ENST00000553237 FNBP4Q8N3X1 1017 aaPredicted RBP22.97■■□□□ 1.27
CDK4-215ENST00000553237 L3MBTL2Q969R5 705 aa22.97■■□□□ 1.27
CDK4-215ENST00000553237 USP32Q8NFA0 1604 aa22.97■■□□□ 1.27
CDK4-215ENST00000553237 TNS3Q68CZ2 1445 aa22.94■■□□□ 1.26
CDK4-215ENST00000553237 EIF3AQ14152 1382 aaKnown RBP22.94■■□□□ 1.26
CDK4-215ENST00000553237 CABLES1Q8TDN4 633 aa22.94■■□□□ 1.26
CDK4-215ENST00000553237 HAP1P54257 671 aaPredicted RBP22.93■■□□□ 1.26
CDK4-215ENST00000553237 TRPC5Q9UL62 973 aaPredicted RBP22.93■■□□□ 1.26
CDK4-215ENST00000553237 ARHGEF28Q8N1W1 1705 aaKnown RBP22.93■■□□□ 1.26
CDK4-215ENST00000553237 SBNO1A3KN83 1393 aa22.92■■□□□ 1.26
CDK4-215ENST00000553237 TULP4Q9NRJ4 1543 aa22.92■■□□□ 1.26
CDK4-215ENST00000553237 CDK12Q9NYV4 1490 aaPredicted RBP22.92■■□□□ 1.26
CDK4-215ENST00000553237 NGDNQ8NEJ9 315 aaKnown RBP22.91■■□□□ 1.26
CDK4-215ENST00000553237 CDK19Q9BWU1 502 aa22.91■■□□□ 1.26
CDK4-215ENST00000553237 NUDT16Q96DE0 195 aaKnown RBP22.9■■□□□ 1.26
CDK4-215ENST00000553237 KIAA1210Q9ULL0 1709 aa22.9■■□□□ 1.26
CDK4-215ENST00000553237 RGS12O14924 1447 aa22.9■■□□□ 1.26
CDK4-215ENST00000553237 GPRASP1Q5JY77 1395 aa22.89■■□□□ 1.26
CDK4-215ENST00000553237 UPF1Q92900 1129 aaKnown RBP eCLIP22.89■■□□□ 1.25
CDK4-215ENST00000553237 BCL9LQ86UU0 1499 aa22.88■■□□□ 1.25
CDK4-215ENST00000553237 ARHGEF10O15013 1369 aa22.88■■□□□ 1.25
CDK4-215ENST00000553237 ATRNO75882 1429 aa22.87■■□□□ 1.25
CDK4-215ENST00000553237 MARF1Q9Y4F3 1742 aaKnown RBP22.85■■□□□ 1.25
CDK4-215ENST00000553237 PAK3O75914 559 aaPredicted RBP22.85■■□□□ 1.25
CDK4-215ENST00000553237 UNC5CLQ8IV45 518 aa22.84■■□□□ 1.25
CDK4-215ENST00000553237 ATP7BP35670 1465 aa22.84■■□□□ 1.25
CDK4-215ENST00000553237 CENPJQ9HC77 1338 aaPredicted RBP22.83■■□□□ 1.25
CDK4-215ENST00000553237 GJD4Q96KN9 370 aaPredicted RBP22.82■■□□□ 1.24
CDK4-215ENST00000553237 TRIM26Q12899 539 aaPredicted RBP22.81■■□□□ 1.24
CDK4-215ENST00000553237 CCDC61Q9Y6R9 512 aa22.81■■□□□ 1.24
CDK4-215ENST00000553237 SLIT2O94813 1529 aa22.81■■□□□ 1.24
CDK4-215ENST00000553237 TRPM3Q9HCF6 1732 aaPredicted RBP22.8■■□□□ 1.24
CDK4-215ENST00000553237 SRPK2P78362 688 aaKnown RBP22.8■■□□□ 1.24
CDK4-215ENST00000553237 FAM83GA6ND36 823 aa22.79■■□□□ 1.24
CDK4-215ENST00000553237 CABP2Q9NPB3 220 aa22.79■■□□□ 1.24
CDK4-215ENST00000553237 ACEP12821 1306 aa22.79■■□□□ 1.24
CDK4-215ENST00000553237 NBPF8Q3BBV2 869 aa22.77■■□□□ 1.24
CDK4-215ENST00000553237 ROCK2O75116 1388 aaKnown RBP22.76■■□□□ 1.23
CDK4-215ENST00000553237 PLEKHG3A1L390 1219 aa22.76■■□□□ 1.23
CDK4-215ENST00000553237 ITSN1Q15811 1721 aa22.76■■□□□ 1.23
CDK4-215ENST00000553237 ALS2Q96Q42 1657 aa22.75■■□□□ 1.23
CDK4-215ENST00000553237 NUTM2GQ5VZR2 741 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms