RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 PRAG1Q86YV5 1406 aa16.84■□□□□ 0.29
TMEM116-218ENST00000552839 MYOM2P54296 1465 aa16.83■□□□□ 0.28
TMEM116-218ENST00000552839 ZRANB1Q9UGI0 708 aa16.83■□□□□ 0.28
TMEM116-218ENST00000552839 BCL9LQ86UU0 1499 aa16.82■□□□□ 0.28
TMEM116-218ENST00000552839 NAIPQ13075 1403 aa16.82■□□□□ 0.28
TMEM116-218ENST00000552839 PCGF6Q9BYE7 350 aa16.82■□□□□ 0.28
TMEM116-218ENST00000552839 PPLO60437 1756 aa16.82■□□□□ 0.28
TMEM116-218ENST00000552839 PXDNQ92626 1479 aa16.8■□□□□ 0.28
TMEM116-218ENST00000552839 NPHP3Q7Z494 1330 aa16.8■□□□□ 0.28
TMEM116-218ENST00000552839 FOXD1Q16676 465 aa16.8■□□□□ 0.28
TMEM116-218ENST00000552839 ESCO1Q5FWF5 840 aa16.8■□□□□ 0.28
TMEM116-218ENST00000552839 CCDC125Q86Z20 511 aa16.79■□□□□ 0.28
TMEM116-218ENST00000552839 CDC42BPGQ6DT37 1551 aa16.79■□□□□ 0.28
TMEM116-218ENST00000552839 RPGRIP1LQ68CZ1 1315 aa16.78■□□□□ 0.28
TMEM116-218ENST00000552839 FOXO3O43524 673 aa16.78■□□□□ 0.28
TMEM116-218ENST00000552839 XPCQ01831 940 aaPredicted RBP16.78■□□□□ 0.28
TMEM116-218ENST00000552839 GJD4Q96KN9 370 aaPredicted RBP16.78■□□□□ 0.28
TMEM116-218ENST00000552839 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.77■□□□□ 0.28
TMEM116-218ENST00000552839 SRCAPQ6ZRS2 3230 aa16.76■□□□□ 0.27
TMEM116-218ENST00000552839 ACIN1Q9UKV3 1341 aaKnown RBP16.76■□□□□ 0.27
TMEM116-218ENST00000552839 BRWD3Q6RI45 1802 aa16.75■□□□□ 0.27
TMEM116-218ENST00000552839 RAB3GAP2Q9H2M9 1393 aa16.75■□□□□ 0.27
TMEM116-218ENST00000552839 EP400Q96L91 3159 aa16.75■□□□□ 0.27
TMEM116-218ENST00000552839 GLI3P10071 1580 aa16.74■□□□□ 0.27
TMEM116-218ENST00000552839 NUTM2FA1L443 756 aa16.74■□□□□ 0.27
TMEM116-218ENST00000552839 SLIT2O94813 1529 aa16.72■□□□□ 0.27
TMEM116-218ENST00000552839 WAPLQ7Z5K2 1190 aa16.72■□□□□ 0.27
TMEM116-218ENST00000552839 RALGAPBQ86X10 1494 aa16.72■□□□□ 0.27
TMEM116-218ENST00000552839 UNC5CLQ8IV45 518 aa16.71■□□□□ 0.27
TMEM116-218ENST00000552839 LRPPRCP42704 1394 aaKnown RBP16.71■□□□□ 0.27
TMEM116-218ENST00000552839 ADGRF5Q8IZF2 1346 aa16.7■□□□□ 0.26
TMEM116-218ENST00000552839 SLC4A1APQ9BWU0 796 aaKnown RBP16.7■□□□□ 0.26
TMEM116-218ENST00000552839 STK26Q9P289 416 aa16.7■□□□□ 0.26
TMEM116-218ENST00000552839 BLMP54132 1417 aaPredicted RBP16.7■□□□□ 0.26
TMEM116-218ENST00000552839 FMN2Q9NZ56 1722 aa16.69■□□□□ 0.26
TMEM116-218ENST00000552839 TECPR2O15040 1411 aa16.69■□□□□ 0.26
TMEM116-218ENST00000552839 RGPD8O14715 1765 aaPredicted RBP16.69■□□□□ 0.26
TMEM116-218ENST00000552839 SPATA31A3Q5VYP0 1347 aa16.69■□□□□ 0.26
TMEM116-218ENST00000552839 KNDC1Q76NI1 1749 aa16.68■□□□□ 0.26
TMEM116-218ENST00000552839 USP32Q8NFA0 1604 aa16.68■□□□□ 0.26
TMEM116-218ENST00000552839 DEFB132Q7Z7B7 95 aa16.68■□□□□ 0.26
TMEM116-218ENST00000552839 PLEKHH1Q9ULM0 1364 aa16.67■□□□□ 0.26
TMEM116-218ENST00000552839 KIF1AQ12756 1690 aa16.67■□□□□ 0.26
TMEM116-218ENST00000552839 IFT172Q9UG01 1749 aa16.67■□□□□ 0.26
TMEM116-218ENST00000552839 TMEM132EQ6IEE7 984 aa16.66■□□□□ 0.26
TMEM116-218ENST00000552839 ABCC11Q96J66 1382 aa16.65■□□□□ 0.26
TMEM116-218ENST00000552839 KRT28Q7Z3Y7 464 aa16.65■□□□□ 0.26
TMEM116-218ENST00000552839 CCDC144AA2RUR9 1427 aa16.64■□□□□ 0.25
TMEM116-218ENST00000552839 RGL3Q3MIN7 710 aa16.64■□□□□ 0.25
TMEM116-218ENST00000552839 SEPT12Q8IYM1 358 aa16.64■□□□□ 0.25
TMEM116-218ENST00000552839 PLCH1Q4KWH8 1693 aa16.64■□□□□ 0.25
TMEM116-218ENST00000552839 NWD2Q9ULI1 1742 aa16.63■□□□□ 0.25
TMEM116-218ENST00000552839 HRCP23327 699 aa16.63■□□□□ 0.25
TMEM116-218ENST00000552839 SF3B2Q13435 895 aaKnown RBP16.62■□□□□ 0.25
TMEM116-218ENST00000552839 VPS72Q15906 364 aa16.62■□□□□ 0.25
TMEM116-218ENST00000552839 CABLES1Q8TDN4 633 aa16.62■□□□□ 0.25
TMEM116-218ENST00000552839 ABCA3Q99758 1704 aa16.62■□□□□ 0.25
TMEM116-218ENST00000552839 SPATA31E1Q6ZUB1 1445 aa16.62■□□□□ 0.25
TMEM116-218ENST00000552839 LRP5O75197 1615 aa16.61■□□□□ 0.25
TMEM116-218ENST00000552839 HAP1P54257 671 aaPredicted RBP16.61■□□□□ 0.25
TMEM116-218ENST00000552839 ANKRD30BQ9BXX2 1392 aa16.61■□□□□ 0.25
TMEM116-218ENST00000552839 TNS3Q68CZ2 1445 aa16.61■□□□□ 0.25
TMEM116-218ENST00000552839 YTHDC2Q9H6S0 1430 aaKnown RBP16.61■□□□□ 0.25
TMEM116-218ENST00000552839 ONECUT3O60422 494 aaPredicted RBP16.6■□□□□ 0.25
TMEM116-218ENST00000552839 PLEKHG5O94827 1062 aa16.6■□□□□ 0.25
TMEM116-218ENST00000552839 PIK3C2GO75747 1445 aa16.6■□□□□ 0.25
TMEM116-218ENST00000552839 KRT27Q7Z3Y8 459 aa16.59■□□□□ 0.25
TMEM116-218ENST00000552839 PHF8Q9UPP1 1060 aa16.59■□□□□ 0.25
TMEM116-218ENST00000552839 CCDC9Q9Y3X0 531 aaKnown RBP16.59■□□□□ 0.25
TMEM116-218ENST00000552839 PSME1Q06323 249 aa16.58■□□□□ 0.24
TMEM116-218ENST00000552839 SIRT1Q96EB6 747 aa16.57■□□□□ 0.24
TMEM116-218ENST00000552839 MPHOSPH9Q99550 1183 aa16.57■□□□□ 0.24
TMEM116-218ENST00000552839 NRXN1Q9ULB1 1477 aa16.56■□□□□ 0.24
TMEM116-218ENST00000552839 SBNO1A3KN83 1393 aa16.56■□□□□ 0.24
TMEM116-218ENST00000552839 FAM83GA6ND36 823 aa16.56■□□□□ 0.24
TMEM116-218ENST00000552839 LMOD2Q6P5Q4 547 aa16.56■□□□□ 0.24
TMEM116-218ENST00000552839 NRAPQ86VF7 1730 aa16.55■□□□□ 0.24
TMEM116-218ENST00000552839 PSDA5PKW4 1024 aaPredicted RBP16.54■□□□□ 0.24
TMEM116-218ENST00000552839 ARHGEF10O15013 1369 aa16.53■□□□□ 0.24
TMEM116-218ENST00000552839 BAG6P46379 1132 aa16.53■□□□□ 0.24
TMEM116-218ENST00000552839 C14orf93Q9H972 538 aaKnown RBP16.53■□□□□ 0.24
TMEM116-218ENST00000552839 A0A0G2JS52 829 aa16.52■□□□□ 0.24
TMEM116-218ENST00000552839 MYT1Q01538 1121 aa16.52■□□□□ 0.24
TMEM116-218ENST00000552839 SAFB2Q14151 953 aaKnown RBP eCLIP16.52■□□□□ 0.24
TMEM116-218ENST00000552839 TRPM3Q9HCF6 1732 aaPredicted RBP16.51■□□□□ 0.23
TMEM116-218ENST00000552839 FAM98CQ17RN3 349 aaKnown RBP16.51■□□□□ 0.23
TMEM116-218ENST00000552839 CFAP70Q5T0N1 1121 aa16.51■□□□□ 0.23
TMEM116-218ENST00000552839 PMFBP1Q8TBY8 1022 aa16.51■□□□□ 0.23
TMEM116-218ENST00000552839 DHX57Q6P158 1386 aaKnown RBP16.51■□□□□ 0.23
TMEM116-218ENST00000552839 RGPD1P0DJD0 1748 aa16.5■□□□□ 0.23
TMEM116-218ENST00000552839 PRAM1Q96QH2 718 aa16.5■□□□□ 0.23
TMEM116-218ENST00000552839 EN1Q05925 392 aaPredicted RBP16.49■□□□□ 0.23
TMEM116-218ENST00000552839 BTG4Q9NY30 223 aa16.49■□□□□ 0.23
TMEM116-218ENST00000552839 ALS2Q96Q42 1657 aa16.49■□□□□ 0.23
TMEM116-218ENST00000552839 COL14A1Q05707 1796 aaKnown RBP16.49■□□□□ 0.23
TMEM116-218ENST00000552839 FAM182BQ5T319 152 aa16.48■□□□□ 0.23
TMEM116-218ENST00000552839 CCER1Q8TC90 406 aaPredicted RBP16.48■□□□□ 0.23
TMEM116-218ENST00000552839 ANKARQ7Z5J8 1434 aa16.47■□□□□ 0.23
TMEM116-218ENST00000552839 TNS1Q9HBL0 1735 aaKnown RBP16.46■□□□□ 0.23
TMEM116-218ENST00000552839 CRYBG1Q9Y4K1 1723 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms