RNA–Protein interactions for RNA: ENST00000552794.1

PPHLN1-222, Transcript of periphilin 1, human

TSL 4

Gene PPHLN1, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPHLN1-222	ENST00000552794	LAMC1	P11047	1609 aa		29.37	■■■□□ 2.29
PPHLN1-222	ENST00000552794	KNDC1	Q76NI1	1749 aa		29.37	■■■□□ 2.29
PPHLN1-222	ENST00000552794	TMEM132E	Q6IEE7	984 aa		29.36	■■■□□ 2.29
PPHLN1-222	ENST00000552794	ORAI2	Q96SN7	254 aa		29.36	■■■□□ 2.29
PPHLN1-222	ENST00000552794	PNPLA6	Q8IY17	1366 aa		29.36	■■■□□ 2.29
PPHLN1-222	ENST00000552794	YTHDC2	Q9H6S0	1430 aa	Known RBP	29.35	■■■□□ 2.29
PPHLN1-222	ENST00000552794	HRC	P23327	699 aa		29.33	■■■□□ 2.29
PPHLN1-222	ENST00000552794	C14orf93	Q9H972	538 aa	Known RBP	29.33	■■■□□ 2.29
PPHLN1-222	ENST00000552794	SOS2	Q07890	1332 aa	Predicted RBP	29.33	■■■□□ 2.29
PPHLN1-222	ENST00000552794	NRXN1	Q9ULB1	1477 aa		29.33	■■■□□ 2.29
PPHLN1-222	ENST00000552794	NPHP3	Q7Z494	1330 aa		29.32	■■■□□ 2.28
PPHLN1-222	ENST00000552794	ESCO1	Q5FWF5	840 aa		29.32	■■■□□ 2.28
PPHLN1-222	ENST00000552794	WAPL	Q7Z5K2	1190 aa		29.32	■■■□□ 2.28
PPHLN1-222	ENST00000552794	DHX57	Q6P158	1386 aa	Known RBP	29.31	■■■□□ 2.28
PPHLN1-222	ENST00000552794	SIRT1	Q96EB6	747 aa		29.29	■■■□□ 2.28
PPHLN1-222	ENST00000552794	AFF2	P51816	1311 aa		29.26	■■■□□ 2.27
PPHLN1-222	ENST00000552794	CFAP70	Q5T0N1	1121 aa		29.26	■■■□□ 2.27
PPHLN1-222	ENST00000552794	PLEKHH1	Q9ULM0	1364 aa		29.26	■■■□□ 2.27
PPHLN1-222	ENST00000552794	C8orf37	Q96NL8	207 aa		29.25	■■■□□ 2.27
PPHLN1-222	ENST00000552794	RXRB	P28702	533 aa		29.24	■■■□□ 2.27
PPHLN1-222	ENST00000552794	STAC3	Q96MF2	364 aa		29.23	■■■□□ 2.27
PPHLN1-222	ENST00000552794	NUTM2F	A1L443	756 aa		29.21	■■■□□ 2.27
PPHLN1-222	ENST00000552794	FOXO3	O43524	673 aa		29.2	■■■□□ 2.26
PPHLN1-222	ENST00000552794	ADAMTS2	O95450	1211 aa		29.2	■■■□□ 2.26
PPHLN1-222	ENST00000552794	NGLY1	Q96IV0	654 aa		29.19	■■■□□ 2.26
PPHLN1-222	ENST00000552794	FMN2	Q9NZ56	1722 aa		29.19	■■■□□ 2.26
PPHLN1-222	ENST00000552794	CDK12	Q9NYV4	1490 aa	Predicted RBP	29.18	■■■□□ 2.26
PPHLN1-222	ENST00000552794	PXDN	Q92626	1479 aa		29.17	■■■□□ 2.26
PPHLN1-222	ENST00000552794	DLC1	Q96QB1	1528 aa		29.17	■■■□□ 2.26
PPHLN1-222	ENST00000552794	POGK	Q9P215	609 aa		29.17	■■■□□ 2.26
PPHLN1-222	ENST00000552794	KIF1A	Q12756	1690 aa		29.17	■■■□□ 2.26
PPHLN1-222	ENST00000552794	DCAF11	Q8TEB1	546 aa		29.16	■■■□□ 2.26
PPHLN1-222	ENST00000552794	PRAM1	Q96QH2	718 aa		29.16	■■■□□ 2.26
PPHLN1-222	ENST00000552794	COL22A1	Q8NFW1	1626 aa	Predicted RBP	29.16	■■■□□ 2.26
PPHLN1-222	ENST00000552794	KDM2A	Q9Y2K7	1162 aa		29.14	■■■□□ 2.26
PPHLN1-222	ENST00000552794	XPC	Q01831	940 aa	Predicted RBP	29.13	■■■□□ 2.25
PPHLN1-222	ENST00000552794	RBM6	P78332	1123 aa	Known RBP	29.12	■■■□□ 2.25
PPHLN1-222	ENST00000552794	SAFB2	Q14151	953 aa	Known RBP eCLIP	29.12	■■■□□ 2.25
PPHLN1-222	ENST00000552794	QTRT2	Q9H974	415 aa	Known RBP	29.12	■■■□□ 2.25
PPHLN1-222	ENST00000552794	ADGRB1	O14514	1584 aa		29.1	■■■□□ 2.25
PPHLN1-222	ENST00000552794	USP21	Q9UK80	565 aa		29.08	■■■□□ 2.25
PPHLN1-222	ENST00000552794	PHF8	Q9UPP1	1060 aa		29.08	■■■□□ 2.25
PPHLN1-222	ENST00000552794	EIF3A	Q14152	1382 aa	Known RBP	29.07	■■■□□ 2.24
PPHLN1-222	ENST00000552794	ANKAR	Q7Z5J8	1434 aa		29.06	■■■□□ 2.24
PPHLN1-222	ENST00000552794	PSME1	Q06323	249 aa		29.06	■■■□□ 2.24
PPHLN1-222	ENST00000552794	TRAK1	Q9UPV9	953 aa		29.06	■■■□□ 2.24
PPHLN1-222	ENST00000552794	ADGRB2	O60241	1585 aa		29.05	■■■□□ 2.24
PPHLN1-222	ENST00000552794	SPATA31A3	Q5VYP0	1347 aa		29.05	■■■□□ 2.24
PPHLN1-222	ENST00000552794	FNBP4	Q8N3X1	1017 aa	Predicted RBP	29.05	■■■□□ 2.24
PPHLN1-222	ENST00000552794	TRPC5	Q9UL62	973 aa	Predicted RBP	29.05	■■■□□ 2.24
PPHLN1-222	ENST00000552794	KRT28	Q7Z3Y7	464 aa		29.04	■■■□□ 2.24
PPHLN1-222	ENST00000552794	RGS12	O14924	1447 aa		29	■■■□□ 2.23
PPHLN1-222	ENST00000552794	TNS3	Q68CZ2	1445 aa		29	■■■□□ 2.23
PPHLN1-222	ENST00000552794	UPF1	Q92900	1129 aa	Known RBP eCLIP	28.99	■■■□□ 2.23
PPHLN1-222	ENST00000552794	RGPD8	O14715	1765 aa	Predicted RBP	28.98	■■■□□ 2.23
PPHLN1-222	ENST00000552794	HAP1	P54257	671 aa	Predicted RBP	28.98	■■■□□ 2.23
PPHLN1-222	ENST00000552794	MINK1	Q8N4C8	1332 aa	Predicted RBP	28.97	■■■□□ 2.23
PPHLN1-222	ENST00000552794	SBNO1	A3KN83	1393 aa		28.97	■■■□□ 2.23
PPHLN1-222	ENST00000552794	MARF1	Q9Y4F3	1742 aa	Known RBP	28.97	■■■□□ 2.23
PPHLN1-222	ENST00000552794	HIRIP3	Q9BW71	556 aa	Predicted RBP	28.96	■■■□□ 2.23
PPHLN1-222	ENST00000552794	ARHGEF10	O15013	1369 aa		28.96	■■■□□ 2.23
PPHLN1-222	ENST00000552794	ATRN	O75882	1429 aa		28.94	■■■□□ 2.22
PPHLN1-222	ENST00000552794	TULP4	Q9NRJ4	1543 aa		28.94	■■■□□ 2.22
PPHLN1-222	ENST00000552794	WASL	O00401	505 aa	Predicted RBP	28.93	■■■□□ 2.22
PPHLN1-222	ENST00000552794	GPRASP1	Q5JY77	1395 aa		28.92	■■■□□ 2.22
PPHLN1-222	ENST00000552794	USP32	Q8NFA0	1604 aa		28.92	■■■□□ 2.22
PPHLN1-222	ENST00000552794	LMOD2	Q6P5Q4	547 aa		28.92	■■■□□ 2.22
PPHLN1-222	ENST00000552794	PMFBP1	Q8TBY8	1022 aa		28.92	■■■□□ 2.22
PPHLN1-222	ENST00000552794	BCL9L	Q86UU0	1499 aa		28.9	■■■□□ 2.22
PPHLN1-222	ENST00000552794	ARHGEF28	Q8N1W1	1705 aa	Known RBP	28.89	■■■□□ 2.22
PPHLN1-222	ENST00000552794	KIAA1210	Q9ULL0	1709 aa		28.88	■■■□□ 2.21
PPHLN1-222	ENST00000552794	ATAD2	Q6PL18	1390 aa		28.87	■■■□□ 2.21
PPHLN1-222	ENST00000552794	UNC5CL	Q8IV45	518 aa		28.86	■■■□□ 2.21
PPHLN1-222	ENST00000552794	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	28.86	■■■□□ 2.21
PPHLN1-222	ENST00000552794	SLIT2	O94813	1529 aa		28.85	■■■□□ 2.21
PPHLN1-222	ENST00000552794	NGDN	Q8NEJ9	315 aa	Known RBP	28.85	■■■□□ 2.21
PPHLN1-222	ENST00000552794	PRR36	Q9H6K5	1346 aa		28.85	■■■□□ 2.21
PPHLN1-222	ENST00000552794	GJD4	Q96KN9	370 aa	Predicted RBP	28.84	■■■□□ 2.21
PPHLN1-222	ENST00000552794	CABLES1	Q8TDN4	633 aa		28.82	■■■□□ 2.2
PPHLN1-222	ENST00000552794	ITSN1	Q15811	1721 aa		28.81	■■■□□ 2.2
PPHLN1-222	ENST00000552794	PLEKHG5	O94827	1062 aa		28.81	■■■□□ 2.2
PPHLN1-222	ENST00000552794	ATP7B	P35670	1465 aa		28.79	■■■□□ 2.2
PPHLN1-222	ENST00000552794	TRPM3	Q9HCF6	1732 aa	Predicted RBP	28.78	■■■□□ 2.2
PPHLN1-222	ENST00000552794	NUDT16	Q96DE0	195 aa	Known RBP	28.78	■■■□□ 2.2
PPHLN1-222	ENST00000552794	ABCA3	Q99758	1704 aa		28.77	■■■□□ 2.2
PPHLN1-222	ENST00000552794	NWD2	Q9ULI1	1742 aa		28.75	■■■□□ 2.19
PPHLN1-222	ENST00000552794	RALGAPB	Q86X10	1494 aa		28.75	■■■□□ 2.19
PPHLN1-222	ENST00000552794	PAK3	O75914	559 aa	Predicted RBP	28.75	■■■□□ 2.19
PPHLN1-222	ENST00000552794	CDK19	Q9BWU1	502 aa		28.75	■■■□□ 2.19
PPHLN1-222	ENST00000552794	ALS2	Q96Q42	1657 aa		28.74	■■■□□ 2.19
PPHLN1-222	ENST00000552794	NBPF1	Q3BBV0	1214 aa		28.74	■■■□□ 2.19
PPHLN1-222	ENST00000552794	VPS72	Q15906	364 aa		28.73	■■■□□ 2.19
PPHLN1-222	ENST00000552794	CCDC9	Q9Y3X0	531 aa	Known RBP	28.72	■■■□□ 2.19
PPHLN1-222	ENST00000552794	CCDC61	Q9Y6R9	512 aa		28.72	■■■□□ 2.19
PPHLN1-222	ENST00000552794	PLCH1	Q4KWH8	1693 aa		28.72	■■■□□ 2.19
PPHLN1-222	ENST00000552794	CENPJ	Q9HC77	1338 aa	Predicted RBP	28.71	■■■□□ 2.19
PPHLN1-222	ENST00000552794	L3MBTL2	Q969R5	705 aa		28.7	■■■□□ 2.18
PPHLN1-222	ENST00000552794	GLI3	P10071	1580 aa		28.7	■■■□□ 2.18
PPHLN1-222	ENST00000552794	CCDC125	Q86Z20	511 aa		28.67	■■■□□ 2.18
PPHLN1-222	ENST00000552794	POLR3A	O14802	1390 aa	Predicted RBP	28.66	■■■□□ 2.18

Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms