RNA–Protein interactions for RNA: ENST00000552566.1

SMARCC2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-212ENST00000552566 PRAG1Q86YV5 1406 aa20.37■□□□□ 0.85
SMARCC2-212ENST00000552566 SOS2Q07890 1332 aaPredicted RBP20.36■□□□□ 0.85
SMARCC2-212ENST00000552566 HRCP23327 699 aa20.36■□□□□ 0.85
SMARCC2-212ENST00000552566 LRPPRCP42704 1394 aaKnown RBP20.35■□□□□ 0.85
SMARCC2-212ENST00000552566 NGLY1Q96IV0 654 aa20.35■□□□□ 0.85
SMARCC2-212ENST00000552566 NHSL1Q5SYE7 1610 aa20.34■□□□□ 0.85
SMARCC2-212ENST00000552566 RAB3GAP2Q9H2M9 1393 aa20.34■□□□□ 0.85
SMARCC2-212ENST00000552566 SETD1AO15047 1707 aaKnown RBP20.33■□□□□ 0.85
SMARCC2-212ENST00000552566 XPCQ01831 940 aaPredicted RBP20.33■□□□□ 0.85
SMARCC2-212ENST00000552566 QTRT2Q9H974 415 aaKnown RBP20.33■□□□□ 0.85
SMARCC2-212ENST00000552566 PPLO60437 1756 aa20.33■□□□□ 0.84
SMARCC2-212ENST00000552566 ABCC11Q96J66 1382 aa20.33■□□□□ 0.84
SMARCC2-212ENST00000552566 PLEKHH1Q9ULM0 1364 aa20.33■□□□□ 0.84
SMARCC2-212ENST00000552566 NPHP3Q7Z494 1330 aa20.32■□□□□ 0.84
SMARCC2-212ENST00000552566 FOXO3O43524 673 aa20.32■□□□□ 0.84
SMARCC2-212ENST00000552566 PIK3C2GO75747 1445 aa20.32■□□□□ 0.84
SMARCC2-212ENST00000552566 CFAP70Q5T0N1 1121 aa20.31■□□□□ 0.84
SMARCC2-212ENST00000552566 C14orf93Q9H972 538 aaKnown RBP20.3■□□□□ 0.84
SMARCC2-212ENST00000552566 TECPR2O15040 1411 aa20.29■□□□□ 0.84
SMARCC2-212ENST00000552566 YTHDC2Q9H6S0 1430 aaKnown RBP20.29■□□□□ 0.84
SMARCC2-212ENST00000552566 UPF1Q92900 1129 aaKnown RBP eCLIP20.28■□□□□ 0.84
SMARCC2-212ENST00000552566 RBM6P78332 1123 aaKnown RBP20.27■□□□□ 0.84
SMARCC2-212ENST00000552566 SAFB2Q14151 953 aaKnown RBP eCLIP20.27■□□□□ 0.84
SMARCC2-212ENST00000552566 DHX57Q6P158 1386 aaKnown RBP20.26■□□□□ 0.83
SMARCC2-212ENST00000552566 USP21Q9UK80 565 aa20.26■□□□□ 0.83
SMARCC2-212ENST00000552566 CDC42BPGQ6DT37 1551 aa20.25■□□□□ 0.83
SMARCC2-212ENST00000552566 SIRT1Q96EB6 747 aa20.24■□□□□ 0.83
SMARCC2-212ENST00000552566 PRAM1Q96QH2 718 aa20.24■□□□□ 0.83
SMARCC2-212ENST00000552566 KDM2AQ9Y2K7 1162 aa20.24■□□□□ 0.83
SMARCC2-212ENST00000552566 POGKQ9P215 609 aa20.22■□□□□ 0.83
SMARCC2-212ENST00000552566 CDK12Q9NYV4 1490 aaPredicted RBP20.22■□□□□ 0.83
SMARCC2-212ENST00000552566 TRPC5Q9UL62 973 aaPredicted RBP20.21■□□□□ 0.83
SMARCC2-212ENST00000552566 PXDNQ92626 1479 aa20.21■□□□□ 0.83
SMARCC2-212ENST00000552566 MYOM2P54296 1465 aa20.2■□□□□ 0.82
SMARCC2-212ENST00000552566 KRT28Q7Z3Y7 464 aa20.2■□□□□ 0.82
SMARCC2-212ENST00000552566 FNBP4Q8N3X1 1017 aaPredicted RBP20.2■□□□□ 0.82
SMARCC2-212ENST00000552566 DCAF11Q8TEB1 546 aa20.2■□□□□ 0.82
SMARCC2-212ENST00000552566 LAMC1P11047 1609 aa20.2■□□□□ 0.82
SMARCC2-212ENST00000552566 RGS12O14924 1447 aa20.19■□□□□ 0.82
SMARCC2-212ENST00000552566 NRXN1Q9ULB1 1477 aa20.19■□□□□ 0.82
SMARCC2-212ENST00000552566 PLEKHG5O94827 1062 aa20.19■□□□□ 0.82
SMARCC2-212ENST00000552566 PHF8Q9UPP1 1060 aa20.19■□□□□ 0.82
SMARCC2-212ENST00000552566 CCER1Q8TC90 406 aaPredicted RBP20.18■□□□□ 0.82
SMARCC2-212ENST00000552566 TRAK1Q9UPV9 953 aa20.18■□□□□ 0.82
SMARCC2-212ENST00000552566 IFT172Q9UG01 1749 aa20.17■□□□□ 0.82
SMARCC2-212ENST00000552566 SPATA31A3Q5VYP0 1347 aa20.17■□□□□ 0.82
SMARCC2-212ENST00000552566 HAP1P54257 671 aaPredicted RBP20.16■□□□□ 0.82
SMARCC2-212ENST00000552566 LMOD2Q6P5Q4 547 aa20.16■□□□□ 0.82
SMARCC2-212ENST00000552566 PSME1Q06323 249 aa20.15■□□□□ 0.82
SMARCC2-212ENST00000552566 HIRIP3Q9BW71 556 aaPredicted RBP20.15■□□□□ 0.82
SMARCC2-212ENST00000552566 PMFBP1Q8TBY8 1022 aa20.13■□□□□ 0.81
SMARCC2-212ENST00000552566 MINK1Q8N4C8 1332 aaPredicted RBP20.12■□□□□ 0.81
SMARCC2-212ENST00000552566 KNDC1Q76NI1 1749 aa20.12■□□□□ 0.81
SMARCC2-212ENST00000552566 ATRNO75882 1429 aa20.11■□□□□ 0.81
SMARCC2-212ENST00000552566 CABLES1Q8TDN4 633 aa20.11■□□□□ 0.81
SMARCC2-212ENST00000552566 COL22A1Q8NFW1 1626 aaPredicted RBP20.1■□□□□ 0.81
SMARCC2-212ENST00000552566 BCL9LQ86UU0 1499 aa20.09■□□□□ 0.81
SMARCC2-212ENST00000552566 ATAD2Q6PL18 1390 aa20.08■□□□□ 0.81
SMARCC2-212ENST00000552566 FMN2Q9NZ56 1722 aa20.08■□□□□ 0.81
SMARCC2-212ENST00000552566 GJD4Q96KN9 370 aaPredicted RBP20.08■□□□□ 0.81
SMARCC2-212ENST00000552566 STAC3Q96MF2 364 aa20.08■□□□□ 0.81
SMARCC2-212ENST00000552566 UNC5CLQ8IV45 518 aa20.07■□□□□ 0.8
SMARCC2-212ENST00000552566 TNS3Q68CZ2 1445 aa20.07■□□□□ 0.8
SMARCC2-212ENST00000552566 DLC1Q96QB1 1528 aa20.07■□□□□ 0.8
SMARCC2-212ENST00000552566 ADGRB1O14514 1584 aa20.06■□□□□ 0.8
SMARCC2-212ENST00000552566 SBNO1A3KN83 1393 aa20.05■□□□□ 0.8
SMARCC2-212ENST00000552566 KIF1AQ12756 1690 aa20.04■□□□□ 0.8
SMARCC2-212ENST00000552566 ANKARQ7Z5J8 1434 aa20.04■□□□□ 0.8
SMARCC2-212ENST00000552566 WASLO00401 505 aaPredicted RBP20.04■□□□□ 0.8
SMARCC2-212ENST00000552566 CCDC9Q9Y3X0 531 aaKnown RBP20.03■□□□□ 0.8
SMARCC2-212ENST00000552566 ARHGEF10O15013 1369 aa20.03■□□□□ 0.8
SMARCC2-212ENST00000552566 PRR36Q9H6K5 1346 aa20.02■□□□□ 0.8
SMARCC2-212ENST00000552566 CLSPNQ9HAW4 1339 aa20.02■□□□□ 0.8
SMARCC2-212ENST00000552566 NGDNQ8NEJ9 315 aaKnown RBP20.02■□□□□ 0.8
SMARCC2-212ENST00000552566 EIF3AQ14152 1382 aaKnown RBP20.02■□□□□ 0.8
SMARCC2-212ENST00000552566 GPRASP1Q5JY77 1395 aa20.02■□□□□ 0.8
SMARCC2-212ENST00000552566 PAK3O75914 559 aaPredicted RBP20■□□□□ 0.79
SMARCC2-212ENST00000552566 SLIT2O94813 1529 aa20■□□□□ 0.79
SMARCC2-212ENST00000552566 RALGAPBQ86X10 1494 aa19.99■□□□□ 0.79
SMARCC2-212ENST00000552566 FAM83GA6ND36 823 aa19.98■□□□□ 0.79
SMARCC2-212ENST00000552566 VPS72Q15906 364 aa19.97■□□□□ 0.79
SMARCC2-212ENST00000552566 NUDT16Q96DE0 195 aaKnown RBP19.96■□□□□ 0.79
SMARCC2-212ENST00000552566 ADGRB2O60241 1585 aa19.95■□□□□ 0.78
SMARCC2-212ENST00000552566 USP32Q8NFA0 1604 aa19.95■□□□□ 0.78
SMARCC2-212ENST00000552566 A0A0G2JS52 829 aa19.95■□□□□ 0.78
SMARCC2-212ENST00000552566 MYT1Q01538 1121 aa19.95■□□□□ 0.78
SMARCC2-212ENST00000552566 SEPT12Q8IYM1 358 aa19.95■□□□□ 0.78
SMARCC2-212ENST00000552566 CDK19Q9BWU1 502 aa19.95■□□□□ 0.78
SMARCC2-212ENST00000552566 TULP4Q9NRJ4 1543 aa19.95■□□□□ 0.78
SMARCC2-212ENST00000552566 NBPF1Q3BBV0 1214 aa19.93■□□□□ 0.78
SMARCC2-212ENST00000552566 CCDC125Q86Z20 511 aa19.93■□□□□ 0.78
SMARCC2-212ENST00000552566 BTG4Q9NY30 223 aa19.93■□□□□ 0.78
SMARCC2-212ENST00000552566 NEUROD1Q13562 356 aa19.91■□□□□ 0.78
SMARCC2-212ENST00000552566 GLI3P10071 1580 aa19.9■□□□□ 0.78
SMARCC2-212ENST00000552566 RGPD8O14715 1765 aaPredicted RBP19.89■□□□□ 0.77
SMARCC2-212ENST00000552566 NUTM2GQ5VZR2 741 aa19.89■□□□□ 0.77
SMARCC2-212ENST00000552566 ZRANB1Q9UGI0 708 aa19.89■□□□□ 0.77
SMARCC2-212ENST00000552566 FAM98CQ17RN3 349 aaKnown RBP19.88■□□□□ 0.77
SMARCC2-212ENST00000552566 PRDM11Q9NQV5 511 aa19.88■□□□□ 0.77
SMARCC2-212ENST00000552566 MARF1Q9Y4F3 1742 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms