RNA–Protein interactions for RNA: ENST00000552545.1

AC055716.2-201, humanhuman

BASIC

Gene AC055716.2, Length 2,441 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.2-201ENST00000552545 ROBO2Q9HCK4 1378 aa12.1□□□□□ -0.47
AC055716.2-201ENST00000552545 DLC1Q96QB1 1528 aa12.09□□□□□ -0.47
AC055716.2-201ENST00000552545 RBM33Q96EV2 1170 aaKnown RBP12.09□□□□□ -0.47
AC055716.2-201ENST00000552545 CDCA8Q53HL2 280 aa12.09□□□□□ -0.47
AC055716.2-201ENST00000552545 SRPK2P78362 688 aaKnown RBP12.08□□□□□ -0.48
AC055716.2-201ENST00000552545 EVC2Q86UK5 1308 aa12.08□□□□□ -0.48
AC055716.2-201ENST00000552545 PIK3R4Q99570 1358 aa12.08□□□□□ -0.48
AC055716.2-201ENST00000552545 CPS1P31327 1500 aa12.08□□□□□ -0.48
AC055716.2-201ENST00000552545 CABP2Q9NPB3 220 aa12.07□□□□□ -0.48
AC055716.2-201ENST00000552545 TECPR2O15040 1411 aa12.07□□□□□ -0.48
AC055716.2-201ENST00000552545 C14orf37Q86TY3 774 aa12.07□□□□□ -0.48
AC055716.2-201ENST00000552545 SIRT1Q96EB6 747 aa12.07□□□□□ -0.48
AC055716.2-201ENST00000552545 XRN1Q8IZH2 1706 aaKnown RBP12.06□□□□□ -0.48
AC055716.2-201ENST00000552545 FAM135BQ49AJ0 1406 aa12.06□□□□□ -0.48
AC055716.2-201ENST00000552545 TMC1Q8TDI8 760 aa12.06□□□□□ -0.48
AC055716.2-201ENST00000552545 CDK19Q9BWU1 502 aa12.06□□□□□ -0.48
AC055716.2-201ENST00000552545 SBNO2Q9Y2G9 1366 aa12.06□□□□□ -0.48
AC055716.2-201ENST00000552545 CNGB1Q14028 1251 aaPredicted RBP12.06□□□□□ -0.48
AC055716.2-201ENST00000552545 NCBP3Q53F19 620 aaKnown RBP12.06□□□□□ -0.48
AC055716.2-201ENST00000552545 PROSER2Q86WR7 435 aaPredicted RBP12.05□□□□□ -0.48
AC055716.2-201ENST00000552545 NUTM2FA1L443 756 aa12.05□□□□□ -0.48
AC055716.2-201ENST00000552545 DMRT2Q9Y5R5 561 aa12.05□□□□□ -0.48
AC055716.2-201ENST00000552545 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.04□□□□□ -0.48
AC055716.2-201ENST00000552545 TULP4Q9NRJ4 1543 aa12.04□□□□□ -0.48
AC055716.2-201ENST00000552545 PTCH1Q13635 1447 aa12.04□□□□□ -0.48
AC055716.2-201ENST00000552545 WASLO00401 505 aaPredicted RBP12.03□□□□□ -0.48
AC055716.2-201ENST00000552545 STRCP1A6NGW2 1772 aa12.03□□□□□ -0.48
AC055716.2-201ENST00000552545 ZNF335Q9H4Z2 1342 aaPredicted RBP12.02□□□□□ -0.49
AC055716.2-201ENST00000552545 PANK3Q9H999 370 aa12.01□□□□□ -0.49
AC055716.2-201ENST00000552545 SLC12A5Q9H2X9 1139 aa12.01□□□□□ -0.49
AC055716.2-201ENST00000552545 NWD1Q149M9 1564 aa12□□□□□ -0.49
AC055716.2-201ENST00000552545 MYOM1P52179 1685 aa11.99□□□□□ -0.49
AC055716.2-201ENST00000552545 NALCNQ8IZF0 1738 aa11.99□□□□□ -0.49
AC055716.2-201ENST00000552545 NUDT16Q96DE0 195 aaKnown RBP11.99□□□□□ -0.49
AC055716.2-201ENST00000552545 ATAD2Q6PL18 1390 aa11.98□□□□□ -0.49
AC055716.2-201ENST00000552545 CABP1Q9NZU7 370 aa11.98□□□□□ -0.49
AC055716.2-201ENST00000552545 RGPD8O14715 1765 aaPredicted RBP11.98□□□□□ -0.49
AC055716.2-201ENST00000552545 NKTRP30414 1462 aaKnown RBP11.98□□□□□ -0.49
AC055716.2-201ENST00000552545 TMEM94Q12767 1356 aa11.97□□□□□ -0.49
AC055716.2-201ENST00000552545 MIER1Q8N108 512 aa11.97□□□□□ -0.49
AC055716.2-201ENST00000552545 PUS7Q96PZ0 661 aaKnown RBP11.97□□□□□ -0.49
AC055716.2-201ENST00000552545 ADGRB2O60241 1585 aa11.97□□□□□ -0.49
AC055716.2-201ENST00000552545 ANP32CO43423 234 aa11.97□□□□□ -0.49
AC055716.2-201ENST00000552545 KNSTRNQ9Y448 316 aa11.96□□□□□ -0.5
AC055716.2-201ENST00000552545 ADGRL3Q9HAR2 1447 aa11.95□□□□□ -0.5
AC055716.2-201ENST00000552545 CCDC61Q9Y6R9 512 aa11.95□□□□□ -0.5
AC055716.2-201ENST00000552545 PRR36Q9H6K5 1346 aa11.95□□□□□ -0.5
AC055716.2-201ENST00000552545 PPIP5K1Q6PFW1 1433 aa11.95□□□□□ -0.5
AC055716.2-201ENST00000552545 C19orf44Q9H6X5 657 aa11.95□□□□□ -0.5
AC055716.2-201ENST00000552545 ATF3P18847 181 aa11.94□□□□□ -0.5
AC055716.2-201ENST00000552545 CC2D1BQ5T0F9 858 aaKnown RBP11.94□□□□□ -0.5
AC055716.2-201ENST00000552545 HDGFL2Q7Z4V5 671 aaPredicted RBP11.94□□□□□ -0.5
AC055716.2-201ENST00000552545 PMFBP1Q8TBY8 1022 aa11.94□□□□□ -0.5
AC055716.2-201ENST00000552545 TERF2IPQ9NYB0 399 aa11.94□□□□□ -0.5
AC055716.2-201ENST00000552545 FMN2Q9NZ56 1722 aa11.93□□□□□ -0.5
AC055716.2-201ENST00000552545 XIRP1Q702N8 1843 aaKnown RBP11.93□□□□□ -0.5
AC055716.2-201ENST00000552545 ATP7BP35670 1465 aa11.93□□□□□ -0.5
AC055716.2-201ENST00000552545 CARD14Q9BXL6 1004 aa11.92□□□□□ -0.5
AC055716.2-201ENST00000552545 LRRC7Q96NW7 1537 aa11.92□□□□□ -0.5
AC055716.2-201ENST00000552545 MSH6P52701 1360 aa11.92□□□□□ -0.5
AC055716.2-201ENST00000552545 NINLQ9Y2I6 1382 aa11.92□□□□□ -0.5
AC055716.2-201ENST00000552545 PER1O15534 1290 aaPredicted RBP11.92□□□□□ -0.5
AC055716.2-201ENST00000552545 ESCO1Q5FWF5 840 aa11.92□□□□□ -0.5
AC055716.2-201ENST00000552545 USP32Q8NFA0 1604 aa11.92□□□□□ -0.5
AC055716.2-201ENST00000552545 CDC42BPGQ6DT37 1551 aa11.92□□□□□ -0.5
AC055716.2-201ENST00000552545 A0A1W2PP64 1363 aa11.92□□□□□ -0.5
AC055716.2-201ENST00000552545 ANKRD36BQ8N2N9 1353 aa11.92□□□□□ -0.5
AC055716.2-201ENST00000552545 NGDNQ8NEJ9 315 aaKnown RBP11.91□□□□□ -0.5
AC055716.2-201ENST00000552545 ITSN1Q15811 1721 aa11.91□□□□□ -0.5
AC055716.2-201ENST00000552545 NSD3Q9BZ95 1437 aa11.91□□□□□ -0.5
AC055716.2-201ENST00000552545 ACEP12821 1306 aa11.9□□□□□ -0.5
AC055716.2-201ENST00000552545 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.9□□□□□ -0.5
AC055716.2-201ENST00000552545 KTN1Q86UP2 1357 aaKnown RBP11.9□□□□□ -0.51
AC055716.2-201ENST00000552545 TOPAZ1Q8N9V7 1692 aa11.89□□□□□ -0.51
AC055716.2-201ENST00000552545 CADPS2Q86UW7 1296 aa11.89□□□□□ -0.51
AC055716.2-201ENST00000552545 ORAI2Q96SN7 254 aa11.89□□□□□ -0.51
AC055716.2-201ENST00000552545 CD163L1Q9NR16 1453 aa11.88□□□□□ -0.51
AC055716.2-201ENST00000552545 ANKARQ7Z5J8 1434 aa11.88□□□□□ -0.51
AC055716.2-201ENST00000552545 NCOA3Q9Y6Q9 1424 aa11.88□□□□□ -0.51
AC055716.2-201ENST00000552545 PRKRIP1Q9H875 184 aaPredicted RBP11.88□□□□□ -0.51
AC055716.2-201ENST00000552545 PHF8Q9UPP1 1060 aa11.88□□□□□ -0.51
AC055716.2-201ENST00000552545 PLEKHG3A1L390 1219 aa11.88□□□□□ -0.51
AC055716.2-201ENST00000552545 ZNF692Q9BU19 519 aaPredicted RBP11.87□□□□□ -0.51
AC055716.2-201ENST00000552545 AKAP12Q02952 1782 aa11.87□□□□□ -0.51
AC055716.2-201ENST00000552545 CGNL1Q0VF96 1302 aa11.87□□□□□ -0.51
AC055716.2-201ENST00000552545 TNNT2P45379 298 aaPredicted RBP11.86□□□□□ -0.51
AC055716.2-201ENST00000552545 AMER1Q5JTC6 1135 aaPredicted RBP11.86□□□□□ -0.51
AC055716.2-201ENST00000552545 PAK3O75914 559 aaPredicted RBP11.86□□□□□ -0.51
AC055716.2-201ENST00000552545 PSME1Q06323 249 aa11.86□□□□□ -0.51
AC055716.2-201ENST00000552545 GGNBP2Q9H3C7 697 aa11.86□□□□□ -0.51
AC055716.2-201ENST00000552545 C1orf167Q5SNV9 1468 aa11.85□□□□□ -0.51
AC055716.2-201ENST00000552545 FOXO3O43524 673 aa11.85□□□□□ -0.51
AC055716.2-201ENST00000552545 XPCQ01831 940 aaPredicted RBP11.85□□□□□ -0.51
AC055716.2-201ENST00000552545 CPSF1Q10570 1443 aaKnown RBP11.85□□□□□ -0.51
AC055716.2-201ENST00000552545 MORC1Q86VD1 984 aa11.85□□□□□ -0.51
AC055716.2-201ENST00000552545 DCCP43146 1447 aa11.85□□□□□ -0.51
AC055716.2-201ENST00000552545 MST1RQ04912 1400 aa11.85□□□□□ -0.51
AC055716.2-201ENST00000552545 LTBP4Q8N2S1 1624 aa11.84□□□□□ -0.51
AC055716.2-201ENST00000552545 MON2Q7Z3U7 1717 aa11.84□□□□□ -0.51
AC055716.2-201ENST00000552545 RALBP1Q15311 655 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms