RNA–Protein interactions for RNA: ENST00000550715.5

LETMD1-225, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 907 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-225ENST00000550715 PRXQ9BXM0 1461 aa12.79□□□□□ -0.36
LETMD1-225ENST00000550715 NEURL4Q96JN8 1562 aa12.79□□□□□ -0.36
LETMD1-225ENST00000550715 TRIM52Q96A61 297 aa12.79□□□□□ -0.36
LETMD1-225ENST00000550715 LRRC7Q96NW7 1537 aa12.78□□□□□ -0.36
LETMD1-225ENST00000550715 SAMD9Q5K651 1589 aa12.78□□□□□ -0.36
LETMD1-225ENST00000550715 ANKLE2Q86XL3 938 aa12.78□□□□□ -0.36
LETMD1-225ENST00000550715 MROH2AA6NES4 1674 aa12.77□□□□□ -0.36
LETMD1-225ENST00000550715 ANO8Q9HCE9 1232 aaPredicted RBP12.77□□□□□ -0.37
LETMD1-225ENST00000550715 DNMT1P26358 1616 aaKnown RBP12.77□□□□□ -0.37
LETMD1-225ENST00000550715 SCUBE2Q9NQ36 999 aa12.76□□□□□ -0.37
LETMD1-225ENST00000550715 A2ML1A8K2U0 1454 aa12.76□□□□□ -0.37
LETMD1-225ENST00000550715 CDK13Q14004 1512 aaKnown RBP12.75□□□□□ -0.37
LETMD1-225ENST00000550715 AK7Q96M32 723 aa12.75□□□□□ -0.37
LETMD1-225ENST00000550715 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.74□□□□□ -0.37
LETMD1-225ENST00000550715 GGT6Q6P531 493 aa12.74□□□□□ -0.37
LETMD1-225ENST00000550715 KHSRPQ92945 711 aaKnown RBP eCLIP12.74□□□□□ -0.379e-6■■□□□ 14.4
LETMD1-225ENST00000550715 RBM33Q96EV2 1170 aaKnown RBP12.74□□□□□ -0.37
LETMD1-225ENST00000550715 STRCP1A6NGW2 1772 aa12.74□□□□□ -0.37
LETMD1-225ENST00000550715 HOXB3P14651 431 aaPredicted RBP12.73□□□□□ -0.37
LETMD1-225ENST00000550715 FBXO31Q5XUX0 539 aaPredicted RBP12.73□□□□□ -0.37
LETMD1-225ENST00000550715 CDHR5Q9HBB8 845 aa12.73□□□□□ -0.37
LETMD1-225ENST00000550715 CLTCQ00610 1675 aaKnown RBP12.73□□□□□ -0.37
LETMD1-225ENST00000550715 FCHSD2O94868 740 aa12.72□□□□□ -0.37
LETMD1-225ENST00000550715 PHF14O94880 888 aa12.72□□□□□ -0.37
LETMD1-225ENST00000550715 PCDHGA10Q9Y5H3 936 aa12.72□□□□□ -0.37
LETMD1-225ENST00000550715 ARHGAP5Q13017 1502 aa12.72□□□□□ -0.37
LETMD1-225ENST00000550715 NPHP4O75161 1426 aaPredicted RBP12.71□□□□□ -0.37
LETMD1-225ENST00000550715 MYO5CQ9NQX4 1742 aa12.71□□□□□ -0.37
LETMD1-225ENST00000550715 NUDT7P0C024 238 aa12.71□□□□□ -0.37
LETMD1-225ENST00000550715 EN1Q05925 392 aaPredicted RBP12.71□□□□□ -0.37
LETMD1-225ENST00000550715 DOK7Q18PE1 504 aa12.71□□□□□ -0.37
LETMD1-225ENST00000550715 KIDINS220Q9ULH0 1771 aa12.71□□□□□ -0.38
LETMD1-225ENST00000550715 POLR1AO95602 1720 aaPredicted RBP12.71□□□□□ -0.38
LETMD1-225ENST00000550715 FAM135BQ49AJ0 1406 aa12.71□□□□□ -0.38
LETMD1-225ENST00000550715 GNPATO15228 680 aa12.7□□□□□ -0.38
LETMD1-225ENST00000550715 MAP3K7O43318 606 aa12.7□□□□□ -0.38
LETMD1-225ENST00000550715 FECHP22830 423 aa12.7□□□□□ -0.38
LETMD1-225ENST00000550715 ARSIQ5FYB1 569 aa12.7□□□□□ -0.38
LETMD1-225ENST00000550715 MAMSTRQ6ZN01 415 aa12.7□□□□□ -0.38
LETMD1-225ENST00000550715 THEMISQ8N1K5 641 aaPredicted RBP12.69□□□□□ -0.38
LETMD1-225ENST00000550715 EPAS1Q99814 870 aa12.69□□□□□ -0.38
LETMD1-225ENST00000550715 ATP1B4Q9UN42 357 aaPredicted RBP12.69□□□□□ -0.38
LETMD1-225ENST00000550715 RNF17Q9BXT8 1623 aaKnown RBP12.69□□□□□ -0.38
LETMD1-225ENST00000550715 PTGDRQ13258 359 aa12.68□□□□□ -0.38
LETMD1-225ENST00000550715 TMEM132AQ24JP5 1023 aa12.68□□□□□ -0.38
LETMD1-225ENST00000550715 CCDC102AQ96A19 550 aa12.68□□□□□ -0.38
LETMD1-225ENST00000550715 GPBP1L1Q9HC44 474 aaPredicted RBP12.68□□□□□ -0.38
LETMD1-225ENST00000550715 MED14O60244 1454 aa12.67□□□□□ -0.38
LETMD1-225ENST00000550715 TRIM66O15016 1216 aa12.67□□□□□ -0.38
LETMD1-225ENST00000550715 MAP2K5Q13163 448 aa12.67□□□□□ -0.38
LETMD1-225ENST00000550715 HIC1Q14526 733 aa12.67□□□□□ -0.38
LETMD1-225ENST00000550715 TSR1Q2NL82 804 aaKnown RBP12.67□□□□□ -0.38
LETMD1-225ENST00000550715 TYW1BQ6NUM6 668 aa12.67□□□□□ -0.38
LETMD1-225ENST00000550715 RIMBP2O15034 1052 aa12.66□□□□□ -0.38
LETMD1-225ENST00000550715 RXRBP28702 533 aa12.66□□□□□ -0.38
LETMD1-225ENST00000550715 KIF14Q15058 1648 aa12.66□□□□□ -0.38
LETMD1-225ENST00000550715 ZNF710Q8N1W2 664 aa12.65□□□□□ -0.38
LETMD1-225ENST00000550715 TNRQ92752 1358 aa12.65□□□□□ -0.38
LETMD1-225ENST00000550715 MINK1Q8N4C8 1332 aaPredicted RBP12.64□□□□□ -0.39
LETMD1-225ENST00000550715 FOSBP53539 338 aa12.64□□□□□ -0.39
LETMD1-225ENST00000550715 ZNF772Q68DY9 489 aaPredicted RBP12.64□□□□□ -0.39
LETMD1-225ENST00000550715 ZNF454Q8N9F8 522 aa12.64□□□□□ -0.39
LETMD1-225ENST00000550715 ABCC1P33527 1531 aa12.63□□□□□ -0.39
LETMD1-225ENST00000550715 PDE4DQ08499 809 aa12.63□□□□□ -0.39
LETMD1-225ENST00000550715 CDK11AQ9UQ88 783 aaPredicted RBP12.63□□□□□ -0.39
LETMD1-225ENST00000550715 IRF6O14896 467 aa12.62□□□□□ -0.39
LETMD1-225ENST00000550715 GPR153Q6NV75 609 aa12.62□□□□□ -0.39
LETMD1-225ENST00000550715 CDC42BPBQ9Y5S2 1711 aa12.62□□□□□ -0.39
LETMD1-225ENST00000550715 SPAG9O60271 1321 aaKnown RBP12.62□□□□□ -0.39
LETMD1-225ENST00000550715 HNRNPMP52272 730 aaKnown RBP eCLIP12.61□□□□□ -0.39
LETMD1-225ENST00000550715 NPDC1Q9NQX5 325 aaPredicted RBP12.61□□□□□ -0.39
LETMD1-225ENST00000550715 FBXW7Q969H0 707 aa12.6□□□□□ -0.39
LETMD1-225ENST00000550715 ZSWIM6Q9HCJ5 1215 aa12.6□□□□□ -0.39
LETMD1-225ENST00000550715 XIRP1Q702N8 1843 aaKnown RBP12.6□□□□□ -0.39
LETMD1-225ENST00000550715 DEPDC5O75140 1603 aa12.59□□□□□ -0.39
LETMD1-225ENST00000550715 JCADQ9P266 1359 aa12.59□□□□□ -0.39
LETMD1-225ENST00000550715 IQGAP1P46940 1657 aa12.59□□□□□ -0.39
LETMD1-225ENST00000550715 MEX3CQ5U5Q3 659 aaKnown RBP12.59□□□□□ -0.39
LETMD1-225ENST00000550715 SETBP1Q9Y6X0 1596 aa12.59□□□□□ -0.39
LETMD1-225ENST00000550715 ITSN2Q9NZM3 1697 aa12.58□□□□□ -0.4
LETMD1-225ENST00000550715 SYNMO15061 1565 aa12.58□□□□□ -0.4
LETMD1-225ENST00000550715 SAMD9LQ8IVG5 1584 aa12.58□□□□□ -0.4
LETMD1-225ENST00000550715 ZDHHC16Q969W1 377 aa12.58□□□□□ -0.4
LETMD1-225ENST00000550715 KDM4CQ9H3R0 1056 aa12.58□□□□□ -0.4
LETMD1-225ENST00000550715 ZNF777Q9ULD5 760 aaPredicted RBP12.58□□□□□ -0.4
LETMD1-225ENST00000550715 TROQ12816 1431 aaPredicted RBP12.57□□□□□ -0.4
LETMD1-225ENST00000550715 ADAM33Q9BZ11 813 aa12.57□□□□□ -0.4
LETMD1-225ENST00000550715 LHX6Q9UPM6 363 aa12.57□□□□□ -0.4
LETMD1-225ENST00000550715 LRP6O75581 1613 aa12.57□□□□□ -0.4
LETMD1-225ENST00000550715 A2MP01023 1474 aa12.57□□□□□ -0.4
LETMD1-225ENST00000550715 ROBO1Q9Y6N7 1651 aa12.57□□□□□ -0.4
LETMD1-225ENST00000550715 MIA2Q96PC5 1412 aa12.56□□□□□ -0.4
LETMD1-225ENST00000550715 FAM135AQ9P2D6 1515 aa12.56□□□□□ -0.4
LETMD1-225ENST00000550715 UGGT1Q9NYU2 1555 aa12.56□□□□□ -0.4
LETMD1-225ENST00000550715 GTF3C3Q9Y5Q9 886 aa12.55□□□□□ -0.4
LETMD1-225ENST00000550715 NUTM2BA6NNL0 878 aaPredicted RBP12.54□□□□□ -0.4
LETMD1-225ENST00000550715 NUTM2EB1AL46 878 aaPredicted RBP12.54□□□□□ -0.4
LETMD1-225ENST00000550715 C6orf132Q5T0Z8 1188 aa12.54□□□□□ -0.4
LETMD1-225ENST00000550715 NUTM2DQ5VT03 806 aaPredicted RBP12.54□□□□□ -0.4
LETMD1-225ENST00000550715 NUTM2AQ8IVF1 878 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms