RNA–Protein interactions for RNA: ENST00000550678.1

LINC02388-201, Transcript of long intergenic non-protein coding RNA 2388, humanhuman

TSL 2 BASIC

Gene LINC02388, Length 1,975 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02388-201ENST00000550678 FAM43AQ8N2R8 423 aa8.14□□□□□ -1.11
LINC02388-201ENST00000550678 NGEFQ8N5V2 710 aa8.14□□□□□ -1.11
LINC02388-201ENST00000550678 METTL14Q9HCE5 456 aaKnown RBP8.14□□□□□ -1.11
LINC02388-201ENST00000550678 ARHGEF10LQ9HCE6 1279 aa8.14□□□□□ -1.11
LINC02388-201ENST00000550678 FEZ2Q9UHY8 353 aaPredicted RBP8.14□□□□□ -1.11
LINC02388-201ENST00000550678 UNC13AQ9UPW8 1703 aa8.14□□□□□ -1.11
LINC02388-201ENST00000550678 HSP90AA1P07900 732 aaKnown RBP8.13□□□□□ -1.11
LINC02388-201ENST00000550678 DSG3P32926 999 aa8.13□□□□□ -1.11
LINC02388-201ENST00000550678 HELBQ8NG08 1087 aaPredicted RBP8.13□□□□□ -1.11
LINC02388-201ENST00000550678 GPATCH3Q96I76 525 aa8.13□□□□□ -1.11
LINC02388-201ENST00000550678 PPP1R1BQ9UD71 204 aaPredicted RBP8.13□□□□□ -1.11
LINC02388-201ENST00000550678 HNRNPUQ00839 825 aaKnown RBP eCLIP8.13□□□□□ -1.11
LINC02388-201ENST00000550678 PARNO95453 639 aaKnown RBP8.12□□□□□ -1.11
LINC02388-201ENST00000550678 MAP2K1Q02750 393 aaPredicted RBP8.12□□□□□ -1.11
LINC02388-201ENST00000550678 NUBP1P53384 320 aa8.11□□□□□ -1.11
LINC02388-201ENST00000550678 CCDC184Q52MB2 194 aa8.11□□□□□ -1.11
LINC02388-201ENST00000550678 PARP9Q8IXQ6 854 aa8.11□□□□□ -1.11
LINC02388-201ENST00000550678 SPOCK3Q9BQ16 436 aa8.11□□□□□ -1.11
LINC02388-201ENST00000550678 MLLT3P42568 568 aaPredicted RBP8.11□□□□□ -1.11
LINC02388-201ENST00000550678 GOLGA3Q08378 1498 aa8.1□□□□□ -1.11
LINC02388-201ENST00000550678 ZRANB2O95218 330 aaKnown RBP eCLIP8.1□□□□□ -1.11
LINC02388-201ENST00000550678 DCAF8Q5TAQ9 597 aa8.1□□□□□ -1.11
LINC02388-201ENST00000550678 SND1Q7KZF4 910 aaKnown RBP eCLIP8.1□□□□□ -1.11
LINC02388-201ENST00000550678 ZBTB12Q9Y330 459 aaPredicted RBP8.1□□□□□ -1.11
LINC02388-201ENST00000550678 CCDC194A0A1B0GVG4 234 aa8.1□□□□□ -1.11
LINC02388-201ENST00000550678 SSR1P43307 286 aaKnown RBP8.1□□□□□ -1.11
LINC02388-201ENST00000550678 CCDC85AQ96PX6 553 aaPredicted RBP8.1□□□□□ -1.11
LINC02388-201ENST00000550678 BSDC1Q9NW68 430 aaPredicted RBP8.1□□□□□ -1.11
LINC02388-201ENST00000550678 VPS8Q8N3P4 1428 aa8.09□□□□□ -1.11
LINC02388-201ENST00000550678 BDNFP23560 247 aa8.09□□□□□ -1.11
LINC02388-201ENST00000550678 PUS10Q3MIT2 529 aaKnown RBP8.09□□□□□ -1.11
LINC02388-201ENST00000550678 TAF3Q5VWG9 929 aa8.09□□□□□ -1.11
LINC02388-201ENST00000550678 RAI14Q9P0K7 980 aa8.09□□□□□ -1.11
LINC02388-201ENST00000550678 IVNS1ABPQ9Y6Y0 642 aa8.09□□□□□ -1.11
LINC02388-201ENST00000550678 SOGA1O94964 1423 aa8.09□□□□□ -1.11
LINC02388-201ENST00000550678 CLIP1P30622 1438 aa8.09□□□□□ -1.11
LINC02388-201ENST00000550678 CUX2O14529 1486 aa8.09□□□□□ -1.12
LINC02388-201ENST00000550678 ABCC8Q09428 1581 aa8.08□□□□□ -1.12
LINC02388-201ENST00000550678 STK10O94804 968 aaKnown RBP8.08□□□□□ -1.12
LINC02388-201ENST00000550678 ZKSCAN8Q15776 578 aaPredicted RBP8.08□□□□□ -1.12
LINC02388-201ENST00000550678 PROCA1Q8NCQ7 364 aaPredicted RBP8.08□□□□□ -1.12
LINC02388-201ENST00000550678 MRRFQ96E11 262 aaKnown RBP8.08□□□□□ -1.12
LINC02388-201ENST00000550678 YY1AP1Q9H869 796 aa8.08□□□□□ -1.12
LINC02388-201ENST00000550678 GEMIN8Q9NWZ8 242 aaKnown RBP8.08□□□□□ -1.12
LINC02388-201ENST00000550678 CCDC88BA6NC98 1476 aa8.08□□□□□ -1.12
LINC02388-201ENST00000550678 EIF4G1Q04637 1599 aaKnown RBP8.08□□□□□ -1.12
LINC02388-201ENST00000550678 U2SURPO15042 1029 aaKnown RBP8.08□□□□□ -1.12
LINC02388-201ENST00000550678 GYS2P54840 703 aa8.08□□□□□ -1.12
LINC02388-201ENST00000550678 RBM46Q8TBY0 533 aaKnown RBP8.08□□□□□ -1.12
LINC02388-201ENST00000550678 BORCS6Q96GS4 357 aa8.08□□□□□ -1.12
LINC02388-201ENST00000550678 GABBR1Q9UBS5 961 aa8.08□□□□□ -1.12
LINC02388-201ENST00000550678 RBM47A0AV96 593 aaKnown RBP8.07□□□□□ -1.12
LINC02388-201ENST00000550678 TSR1Q2NL82 804 aaKnown RBP8.07□□□□□ -1.12
LINC02388-201ENST00000550678 ZCRB1Q8TBF4 217 aaKnown RBP8.07□□□□□ -1.12
LINC02388-201ENST00000550678 PCMTD1Q96MG8 357 aaPredicted RBP8.07□□□□□ -1.12
LINC02388-201ENST00000550678 GNL3LQ9NVN8 582 aaKnown RBP8.07□□□□□ -1.12
LINC02388-201ENST00000550678 KAT6BQ8WYB5 2073 aa8.07□□□□□ -1.12
LINC02388-201ENST00000550678 CARNS1A5YM72 827 aa8.06□□□□□ -1.12
LINC02388-201ENST00000550678 CEP126Q9P2H0 1117 aa8.06□□□□□ -1.12
LINC02388-201ENST00000550678 C11orf96Q7Z7L8 435 aa8.06□□□□□ -1.12
LINC02388-201ENST00000550678 FRAT1Q92837 279 aaPredicted RBP8.06□□□□□ -1.12
LINC02388-201ENST00000550678 TMX4Q9H1E5 349 aaPredicted RBP8.06□□□□□ -1.12
LINC02388-201ENST00000550678 PDCL3Q9H2J4 239 aa8.06□□□□□ -1.12
LINC02388-201ENST00000550678 TPX2Q9ULW0 747 aaKnown RBP8.06□□□□□ -1.12
LINC02388-201ENST00000550678 COG6Q9Y2V7 657 aa8.06□□□□□ -1.12
LINC02388-201ENST00000550678 COMMD10Q9Y6G5 202 aa8.06□□□□□ -1.12
LINC02388-201ENST00000550678 WDHD1O75717 1129 aaPredicted RBP8.05□□□□□ -1.12
LINC02388-201ENST00000550678 TCF3P15923 654 aa8.05□□□□□ -1.12
LINC02388-201ENST00000550678 ZRSR2Q15696 482 aaKnown RBP8.05□□□□□ -1.12
LINC02388-201ENST00000550678 AMOTL1Q8IY63 956 aa8.05□□□□□ -1.12
LINC02388-201ENST00000550678 SMAP1Q8IYB5 467 aaPredicted RBP8.05□□□□□ -1.12
LINC02388-201ENST00000550678 RNF217Q8TC41 542 aa8.05□□□□□ -1.12
LINC02388-201ENST00000550678 IRF2BPLQ9H1B7 796 aa8.05□□□□□ -1.12
LINC02388-201ENST00000550678 NRBP1Q9UHY1 535 aa8.05□□□□□ -1.12
LINC02388-201ENST00000550678 ZNF330Q9Y3S2 320 aaPredicted RBP8.05□□□□□ -1.12
LINC02388-201ENST00000550678 NCAPD3P42695 1498 aa8.05□□□□□ -1.12
LINC02388-201ENST00000550678 PPP4CP60510 307 aa8.04□□□□□ -1.12
LINC02388-201ENST00000550678 AMHR2Q16671 573 aa8.04□□□□□ -1.12
LINC02388-201ENST00000550678 UBXN4Q92575 508 aa8.04□□□□□ -1.12
LINC02388-201ENST00000550678 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.04□□□□□ -1.12
LINC02388-201ENST00000550678 WDR97A6NE52 1622 aa8.04□□□□□ -1.12
LINC02388-201ENST00000550678 CFAP69A5D8W1 941 aa8.04□□□□□ -1.12
LINC02388-201ENST00000550678 GPR37O15354 613 aa8.04□□□□□ -1.12
LINC02388-201ENST00000550678 CT47B1P0C2W7 299 aaPredicted RBP8.04□□□□□ -1.12
LINC02388-201ENST00000550678 TDO2P48775 406 aa8.04□□□□□ -1.12
LINC02388-201ENST00000550678 SATB1Q01826 763 aa8.04□□□□□ -1.12
LINC02388-201ENST00000550678 NEXNQ0ZGT2 675 aa8.04□□□□□ -1.12
LINC02388-201ENST00000550678 C4orf46Q504U0 113 aa8.04□□□□□ -1.12
LINC02388-201ENST00000550678 PPP4R3BQ5MIZ7 849 aa8.04□□□□□ -1.12
LINC02388-201ENST00000550678 UTP14CQ5TAP6 766 aaKnown RBP8.04□□□□□ -1.12
LINC02388-201ENST00000550678 BANK1Q8NDB2 785 aa8.04□□□□□ -1.12
LINC02388-201ENST00000550678 JADE2Q9NQC1 790 aa8.04□□□□□ -1.12
LINC02388-201ENST00000550678 MRVI1Q9Y6F6 885 aa8.04□□□□□ -1.12
LINC02388-201ENST00000550678 CEP164Q9UPV0 1460 aa8.04□□□□□ -1.12
LINC02388-201ENST00000550678 EIF3JO75822 258 aaKnown RBP8.03□□□□□ -1.12
LINC02388-201ENST00000550678 PRR29P0C7W0 189 aa8.03□□□□□ -1.12
LINC02388-201ENST00000550678 COPB2P35606 906 aa8.03□□□□□ -1.12
LINC02388-201ENST00000550678 DNTTIP2Q5QJE6 756 aaKnown RBP8.03□□□□□ -1.12
LINC02388-201ENST00000550678 PABPN1Q86U42 306 aaKnown RBP eCLIP8.03□□□□□ -1.12
LINC02388-201ENST00000550678 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms