RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 CHGAP10645 457 aaKnown RBP13.99□□□□□ -0.17
SMARCC2-208ENST00000550150 TMEM131LA2VDJ0 1609 aa13.99□□□□□ -0.17
SMARCC2-208ENST00000550150 CANXP27824 592 aaKnown RBP13.98□□□□□ -0.17
SMARCC2-208ENST00000550150 SLKQ9H2G2 1235 aaPredicted RBP13.98□□□□□ -0.17
SMARCC2-208ENST00000550150 NEXMIFQ5QGS0 1516 aa13.97□□□□□ -0.17
SMARCC2-208ENST00000550150 KNSTRNQ9Y448 316 aa13.97□□□□□ -0.17
SMARCC2-208ENST00000550150 SETBP1Q9Y6X0 1596 aa13.97□□□□□ -0.17
SMARCC2-208ENST00000550150 NEUROD2Q15784 382 aa13.96□□□□□ -0.17
SMARCC2-208ENST00000550150 CFAP70Q5T0N1 1121 aa13.96□□□□□ -0.18
SMARCC2-208ENST00000550150 TMF1P82094 1093 aa13.95□□□□□ -0.18
SMARCC2-208ENST00000550150 PER1O15534 1290 aaPredicted RBP13.95□□□□□ -0.18
SMARCC2-208ENST00000550150 FAM161AQ3B820 660 aa13.95□□□□□ -0.18
SMARCC2-208ENST00000550150 SPATA31D1Q6ZQQ2 1576 aa13.95□□□□□ -0.18
SMARCC2-208ENST00000550150 DISP3Q9P2K9 1392 aa13.95□□□□□ -0.18
SMARCC2-208ENST00000550150 CEBPAP49715 358 aaPredicted RBP13.94□□□□□ -0.18
SMARCC2-208ENST00000550150 SPRYD3Q8NCJ5 442 aa13.94□□□□□ -0.18
SMARCC2-208ENST00000550150 ZMYM3Q14202 1370 aa13.93□□□□□ -0.18
SMARCC2-208ENST00000550150 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.93□□□□□ -0.18
SMARCC2-208ENST00000550150 GOLGA2Q08379 1002 aa13.93□□□□□ -0.18
SMARCC2-208ENST00000550150 CENPQQ7L2Z9 268 aaPredicted RBP13.93□□□□□ -0.18
SMARCC2-208ENST00000550150 BCAR3O75815 825 aa13.92□□□□□ -0.18
SMARCC2-208ENST00000550150 PARD3Q8TEW0 1356 aa13.92□□□□□ -0.18
SMARCC2-208ENST00000550150 PIK3C2GO75747 1445 aa13.92□□□□□ -0.18
SMARCC2-208ENST00000550150 TESK2Q96S53 571 aa13.92□□□□□ -0.18
SMARCC2-208ENST00000550150 TNNT2P45379 298 aaPredicted RBP13.92□□□□□ -0.18
SMARCC2-208ENST00000550150 C3P01024 1663 aa13.91□□□□□ -0.18
SMARCC2-208ENST00000550150 APAF1O14727 1248 aa13.9□□□□□ -0.18
SMARCC2-208ENST00000550150 ADGRB1O14514 1584 aa13.9□□□□□ -0.18
SMARCC2-208ENST00000550150 FER1L4A9Z1Z3 1794 aa13.9□□□□□ -0.18
SMARCC2-208ENST00000550150 C8orf34Q49A92 452 aa13.9□□□□□ -0.18
SMARCC2-208ENST00000550150 TMEM132EQ6IEE7 984 aa13.89□□□□□ -0.19
SMARCC2-208ENST00000550150 PLPPR3Q6T4P5 718 aa13.89□□□□□ -0.19
SMARCC2-208ENST00000550150 ASXL1Q8IXJ9 1541 aa13.89□□□□□ -0.19
SMARCC2-208ENST00000550150 KDM5AP29375 1690 aaKnown RBP13.89□□□□□ -0.19
SMARCC2-208ENST00000550150 INSRP06213 1382 aa13.89□□□□□ -0.19
SMARCC2-208ENST00000550150 DUSP27Q5VZP5 1158 aa13.88□□□□□ -0.19
SMARCC2-208ENST00000550150 PPP2R1AP30153 589 aa13.88□□□□□ -0.19
SMARCC2-208ENST00000550150 PLEKHH1Q9ULM0 1364 aa13.88□□□□□ -0.19
SMARCC2-208ENST00000550150 A2ML1A8K2U0 1454 aa13.87□□□□□ -0.19
SMARCC2-208ENST00000550150 COG6Q9Y2V7 657 aa13.87□□□□□ -0.19
SMARCC2-208ENST00000550150 USP32Q8NFA0 1604 aa13.87□□□□□ -0.19
SMARCC2-208ENST00000550150 BCL2L13Q9BXK5 485 aa13.87□□□□□ -0.19
SMARCC2-208ENST00000550150 SPINK5Q9NQ38 1064 aaPredicted RBP13.87□□□□□ -0.19
SMARCC2-208ENST00000550150 PANK1Q8TE04 598 aa13.86□□□□□ -0.19
SMARCC2-208ENST00000550150 RRP7AQ9Y3A4 280 aaKnown RBP13.86□□□□□ -0.19
SMARCC2-208ENST00000550150 ARHGEF28Q8N1W1 1705 aaKnown RBP13.86□□□□□ -0.19
SMARCC2-208ENST00000550150 GZF1Q9H116 711 aaPredicted RBP13.85□□□□□ -0.19
SMARCC2-208ENST00000550150 SLC52A1Q9NWF4 448 aa13.85□□□□□ -0.19
SMARCC2-208ENST00000550150 POGKQ9P215 609 aa13.85□□□□□ -0.19
SMARCC2-208ENST00000550150 CLUAP1Q96AJ1 413 aa13.85□□□□□ -0.19
SMARCC2-208ENST00000550150 KDM2BQ8NHM5 1336 aa13.85□□□□□ -0.19
SMARCC2-208ENST00000550150 SCAF11Q99590 1463 aaKnown RBP13.85□□□□□ -0.19
SMARCC2-208ENST00000550150 UBR1Q8IWV7 1749 aa13.85□□□□□ -0.19
SMARCC2-208ENST00000550150 PPP6R1Q9UPN7 881 aa13.85□□□□□ -0.19
SMARCC2-208ENST00000550150 NRXN3Q9Y4C0 1643 aa13.84□□□□□ -0.19
SMARCC2-208ENST00000550150 SEC24BO95487 1268 aa13.84□□□□□ -0.19
SMARCC2-208ENST00000550150 IGHDP01880 384 aa13.84□□□□□ -0.19
SMARCC2-208ENST00000550150 STAC3Q96MF2 364 aa13.84□□□□□ -0.19
SMARCC2-208ENST00000550150 QRICH2Q9H0J4 1663 aa13.84□□□□□ -0.19
SMARCC2-208ENST00000550150 SETD1AO15047 1707 aaKnown RBP13.84□□□□□ -0.19
SMARCC2-208ENST00000550150 PTPRMP28827 1452 aa13.83□□□□□ -0.19
SMARCC2-208ENST00000550150 C14orf93Q9H972 538 aaKnown RBP13.83□□□□□ -0.2
SMARCC2-208ENST00000550150 ZFYVE9O95405 1425 aa13.82□□□□□ -0.2
SMARCC2-208ENST00000550150 RIMS1Q86UR5 1692 aaKnown RBP13.82□□□□□ -0.2
SMARCC2-208ENST00000550150 DMRT2Q9Y5R5 561 aa13.81□□□□□ -0.2
SMARCC2-208ENST00000550150 TNRQ92752 1358 aa13.8□□□□□ -0.2
SMARCC2-208ENST00000550150 TRAK1Q9UPV9 953 aa13.8□□□□□ -0.2
SMARCC2-208ENST00000550150 BLMP54132 1417 aaPredicted RBP13.8□□□□□ -0.2
SMARCC2-208ENST00000550150 SLFN5Q08AF3 891 aa13.79□□□□□ -0.2
SMARCC2-208ENST00000550150 ALKQ9UM73 1620 aa13.79□□□□□ -0.2
SMARCC2-208ENST00000550150 RPGRIP1LQ68CZ1 1315 aa13.79□□□□□ -0.2
SMARCC2-208ENST00000550150 BECN1Q14457 450 aa13.78□□□□□ -0.2
SMARCC2-208ENST00000550150 ESF1Q9H501 851 aaKnown RBP13.78□□□□□ -0.2
SMARCC2-208ENST00000550150 UPF2Q9HAU5 1272 aaKnown RBP13.78□□□□□ -0.2
SMARCC2-208ENST00000550150 RIMS2Q9UQ26 1411 aa13.78□□□□□ -0.2
SMARCC2-208ENST00000550150 ADAMTSL3P82987 1691 aa13.78□□□□□ -0.2
SMARCC2-208ENST00000550150 SBNO2Q9Y2G9 1366 aa13.78□□□□□ -0.2
SMARCC2-208ENST00000550150 SHPRHQ149N8 1683 aa13.77□□□□□ -0.21
SMARCC2-208ENST00000550150 VGFO15240 615 aaPredicted RBP13.76□□□□□ -0.21
SMARCC2-208ENST00000550150 STAG3Q9UJ98 1225 aa13.76□□□□□ -0.21
SMARCC2-208ENST00000550150 TNNQ9UQP3 1299 aa13.76□□□□□ -0.21
SMARCC2-208ENST00000550150 CENPJQ9HC77 1338 aaPredicted RBP13.76□□□□□ -0.21
SMARCC2-208ENST00000550150 LTKP29376 864 aa13.75□□□□□ -0.21
SMARCC2-208ENST00000550150 NPC1L1Q9UHC9 1359 aa13.75□□□□□ -0.21
SMARCC2-208ENST00000550150 AMER1Q5JTC6 1135 aaPredicted RBP13.75□□□□□ -0.21
SMARCC2-208ENST00000550150 STK26Q9P289 416 aa13.75□□□□□ -0.21
SMARCC2-208ENST00000550150 SAFB2Q14151 953 aaKnown RBP eCLIP13.75□□□□□ -0.21
SMARCC2-208ENST00000550150 METP08581 1390 aa13.73□□□□□ -0.21
SMARCC2-208ENST00000550150 TULP4Q9NRJ4 1543 aa13.73□□□□□ -0.21
SMARCC2-208ENST00000550150 ANKRD26Q9UPS8 1709 aa13.73□□□□□ -0.21
SMARCC2-208ENST00000550150 E9PSI1 815 aa13.72□□□□□ -0.21
SMARCC2-208ENST00000550150 CDCA8Q53HL2 280 aa13.72□□□□□ -0.21
SMARCC2-208ENST00000550150 TMEM2Q9UHN6 1383 aa13.72□□□□□ -0.21
SMARCC2-208ENST00000550150 MFAP1P55081 439 aaKnown RBP13.71□□□□□ -0.21
SMARCC2-208ENST00000550150 NAP1L5Q96NT1 182 aaPredicted RBP13.71□□□□□ -0.21
SMARCC2-208ENST00000550150 YTHDC2Q9H6S0 1430 aaKnown RBP13.7□□□□□ -0.22
SMARCC2-208ENST00000550150 CGNL1Q0VF96 1302 aa13.69□□□□□ -0.22
SMARCC2-208ENST00000550150 ADAMTS13Q76LX8 1427 aa13.69□□□□□ -0.22
SMARCC2-208ENST00000550150 NLRP1Q9C000 1473 aa13.68□□□□□ -0.22
SMARCC2-208ENST00000550150 ZNF521Q96K83 1311 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms