RNA–Protein interactions for RNA: ENST00000549766.5

TGFBR1-207, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 5

Gene TGFBR1, Length 1,678 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-207ENST00000549766 BRD4O60885 1362 aaPredicted RBP33.44■■■□□ 2.94
TGFBR1-207ENST00000549766 SIRT1Q96EB6 747 aa33.42■■■□□ 2.94
TGFBR1-207ENST00000549766 SAFB2Q14151 953 aaKnown RBP eCLIP33.42■■■□□ 2.94
TGFBR1-207ENST00000549766 CC2D1BQ5T0F9 858 aaKnown RBP33.4■■■□□ 2.94
TGFBR1-207ENST00000549766 CPS1P31327 1500 aa33.39■■■□□ 2.94
TGFBR1-207ENST00000549766 FAM135BQ49AJ0 1406 aa33.39■■■□□ 2.94
TGFBR1-207ENST00000549766 ZNF142P52746 1687 aaPredicted RBP33.38■■■□□ 2.93
TGFBR1-207ENST00000549766 CARD14Q9BXL6 1004 aa33.38■■■□□ 2.93
TGFBR1-207ENST00000549766 NLRP13Q86W25 1043 aa33.37■■■□□ 2.93
TGFBR1-207ENST00000549766 PLEKHH1Q9ULM0 1364 aa33.36■■■□□ 2.93
TGFBR1-207ENST00000549766 MINK1Q8N4C8 1332 aaPredicted RBP33.36■■■□□ 2.93
TGFBR1-207ENST00000549766 SLC12A5Q9H2X9 1139 aa33.36■■■□□ 2.93
TGFBR1-207ENST00000549766 BCANQ96GW7 911 aa33.35■■■□□ 2.93
TGFBR1-207ENST00000549766 CABP2Q9NPB3 220 aa33.35■■■□□ 2.93
TGFBR1-207ENST00000549766 NINLQ9Y2I6 1382 aa33.34■■■□□ 2.93
TGFBR1-207ENST00000549766 WAPLQ7Z5K2 1190 aa33.33■■■□□ 2.93
TGFBR1-207ENST00000549766 FAM9BQ8IZU0 186 aa33.33■■■□□ 2.93
TGFBR1-207ENST00000549766 TMC1Q8TDI8 760 aa33.33■■■□□ 2.93
TGFBR1-207ENST00000549766 ATAD2Q6PL18 1390 aa33.32■■■□□ 2.92
TGFBR1-207ENST00000549766 PNISRQ8TF01 805 aaKnown RBP33.32■■■□□ 2.92
TGFBR1-207ENST00000549766 DIP2AQ14689 1571 aa33.31■■■□□ 2.92
TGFBR1-207ENST00000549766 SETD1BQ9UPS6 1966 aaKnown RBP33.31■■■□□ 2.92
TGFBR1-207ENST00000549766 TBX22Q9Y458 520 aa33.3■■■□□ 2.92
TGFBR1-207ENST00000549766 ANKRD36BQ8N2N9 1353 aa33.29■■■□□ 2.92
TGFBR1-207ENST00000549766 SRPK2P78362 688 aaKnown RBP33.28■■■□□ 2.92
TGFBR1-207ENST00000549766 USP32Q8NFA0 1604 aa33.27■■■□□ 2.92
TGFBR1-207ENST00000549766 CDK19Q9BWU1 502 aa33.26■■■□□ 2.92
TGFBR1-207ENST00000549766 PTPRUQ92729 1446 aa33.26■■■□□ 2.91
TGFBR1-207ENST00000549766 NSD3Q9BZ95 1437 aa33.25■■■□□ 2.91
TGFBR1-207ENST00000549766 HNRNPUQ00839 825 aaKnown RBP eCLIP33.25■■■□□ 2.91
TGFBR1-207ENST00000549766 ROBO2Q9HCK4 1378 aa33.24■■■□□ 2.91
TGFBR1-207ENST00000549766 SLC26A8Q96RN1 970 aa33.24■■■□□ 2.91
TGFBR1-207ENST00000549766 PPP2R1AP30153 589 aa33.2■■■□□ 2.91
TGFBR1-207ENST00000549766 CD163L1Q9NR16 1453 aa33.18■■■□□ 2.9
TGFBR1-207ENST00000549766 SCAF1Q9H7N4 1312 aaKnown RBP33.17■■■□□ 2.9
TGFBR1-207ENST00000549766 WASLO00401 505 aaPredicted RBP33.17■■■□□ 2.9
TGFBR1-207ENST00000549766 A0A1W2PP64 1363 aa33.17■■■□□ 2.9
TGFBR1-207ENST00000549766 ADGRB2O60241 1585 aa33.16■■■□□ 2.9
TGFBR1-207ENST00000549766 ANKLE2Q86XL3 938 aa33.16■■■□□ 2.9
TGFBR1-207ENST00000549766 PTCH1Q13635 1447 aa33.15■■■□□ 2.9
TGFBR1-207ENST00000549766 PIK3R4Q99570 1358 aa33.15■■■□□ 2.9
TGFBR1-207ENST00000549766 AMOTL2Q9Y2J4 779 aa33.13■■■□□ 2.89
TGFBR1-207ENST00000549766 CGNL1Q0VF96 1302 aa33.12■■■□□ 2.89
TGFBR1-207ENST00000549766 XRN1Q8IZH2 1706 aaKnown RBP33.12■■■□□ 2.89
TGFBR1-207ENST00000549766 NSD2O96028 1365 aa33.12■■■□□ 2.89
TGFBR1-207ENST00000549766 TERF2IPQ9NYB0 399 aa33.11■■■□□ 2.89
TGFBR1-207ENST00000549766 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.11■■■□□ 2.89
TGFBR1-207ENST00000549766 INSRP06213 1382 aa33.1■■■□□ 2.89
TGFBR1-207ENST00000549766 ZBED9Q6R2W3 1325 aa33.1■■■□□ 2.89
TGFBR1-207ENST00000549766 ATP7BP35670 1465 aa33.09■■■□□ 2.89
TGFBR1-207ENST00000549766 GTF3C3Q9Y5Q9 886 aa33.09■■■□□ 2.89
TGFBR1-207ENST00000549766 CABP1Q9NZU7 370 aa33.08■■■□□ 2.89
TGFBR1-207ENST00000549766 HDGFL2Q7Z4V5 671 aaPredicted RBP33.04■■■□□ 2.88
TGFBR1-207ENST00000549766 MORC1Q86VD1 984 aa33.01■■■□□ 2.88
TGFBR1-207ENST00000549766 NUDT16Q96DE0 195 aaKnown RBP33.01■■■□□ 2.88
TGFBR1-207ENST00000549766 CPSF1Q10570 1443 aaKnown RBP33.01■■■□□ 2.88
TGFBR1-207ENST00000549766 PPIP5K1Q6PFW1 1433 aa33■■■□□ 2.87
TGFBR1-207ENST00000549766 CCDC61Q9Y6R9 512 aa32.99■■■□□ 2.87
TGFBR1-207ENST00000549766 NPHP4O75161 1426 aaPredicted RBP32.98■■■□□ 2.87
TGFBR1-207ENST00000549766 PRR36Q9H6K5 1346 aa32.98■■■□□ 2.87
TGFBR1-207ENST00000549766 BLMP54132 1417 aaPredicted RBP32.96■■■□□ 2.87
TGFBR1-207ENST00000549766 CDC42BPGQ6DT37 1551 aa32.96■■■□□ 2.87
TGFBR1-207ENST00000549766 CHD2O14647 1828 aaKnown RBP32.96■■■□□ 2.87
TGFBR1-207ENST00000549766 KCNA6P17658 529 aa32.95■■■□□ 2.87
TGFBR1-207ENST00000549766 ILDR1Q86SU0 546 aaPredicted RBP32.95■■■□□ 2.87
TGFBR1-207ENST00000549766 POLR3AO14802 1390 aaPredicted RBP32.95■■■□□ 2.87
TGFBR1-207ENST00000549766 FYB1O15117 783 aa32.94■■■□□ 2.86
TGFBR1-207ENST00000549766 ANKRD26Q9UPS8 1709 aa32.93■■■□□ 2.86
TGFBR1-207ENST00000549766 TOPAZ1Q8N9V7 1692 aa32.93■■■□□ 2.86
TGFBR1-207ENST00000549766 EDC4Q6P2E9 1401 aaKnown RBP32.9■■■□□ 2.86
TGFBR1-207ENST00000549766 NCKAP5LQ9HCH0 1330 aa32.89■■■□□ 2.86
TGFBR1-207ENST00000549766 ADAMTS8Q9UP79 889 aa32.88■■■□□ 2.85
TGFBR1-207ENST00000549766 KIF20BQ96Q89 1820 aa32.88■■■□□ 2.85
TGFBR1-207ENST00000549766 MON2Q7Z3U7 1717 aa32.87■■■□□ 2.85
TGFBR1-207ENST00000549766 AKAP12Q02952 1782 aa32.87■■■□□ 2.85
TGFBR1-207ENST00000549766 GGNBP2Q9H3C7 697 aa32.86■■■□□ 2.85
TGFBR1-207ENST00000549766 PLEKHG3A1L390 1219 aa32.85■■■□□ 2.85
TGFBR1-207ENST00000549766 WDR43Q15061 677 aaKnown RBP eCLIP32.85■■■□□ 2.85
TGFBR1-207ENST00000549766 ZNF692Q9BU19 519 aaPredicted RBP32.84■■■□□ 2.85
TGFBR1-207ENST00000549766 TNNT2P45379 298 aaPredicted RBP32.83■■■□□ 2.85
TGFBR1-207ENST00000549766 ITSN1Q15811 1721 aa32.82■■■□□ 2.85
TGFBR1-207ENST00000549766 MTHFSP49914 203 aa32.81■■■□□ 2.84
TGFBR1-207ENST00000549766 NKTRP30414 1462 aaKnown RBP32.8■■■□□ 2.84
TGFBR1-207ENST00000549766 NWD1Q149M9 1564 aa32.79■■■□□ 2.84
TGFBR1-207ENST00000549766 ANKARQ7Z5J8 1434 aa32.79■■■□□ 2.84
TGFBR1-207ENST00000549766 SHPRHQ149N8 1683 aa32.78■■■□□ 2.84
TGFBR1-207ENST00000549766 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.76■■■□□ 2.84
TGFBR1-207ENST00000549766 NRKQ7Z2Y5 1582 aa32.76■■■□□ 2.83
TGFBR1-207ENST00000549766 FMN2Q9NZ56 1722 aa32.76■■■□□ 2.83
TGFBR1-207ENST00000549766 SMG6Q86US8 1419 aaKnown RBP32.75■■■□□ 2.83
TGFBR1-207ENST00000549766 ACEP12821 1306 aa32.75■■■□□ 2.83
TGFBR1-207ENST00000549766 NALCNQ8IZF0 1738 aa32.74■■■□□ 2.83
TGFBR1-207ENST00000549766 NUTM2FA1L443 756 aa32.73■■■□□ 2.83
TGFBR1-207ENST00000549766 CFAP53Q96M91 514 aa32.72■■■□□ 2.83
TGFBR1-207ENST00000549766 USP6P35125 1406 aa32.71■■■□□ 2.83
TGFBR1-207ENST00000549766 SSH2Q76I76 1423 aa32.7■■■□□ 2.83
TGFBR1-207ENST00000549766 SENP3-EIF4A1A0A087X0R7 540 aa32.7■■■□□ 2.83
TGFBR1-207ENST00000549766 ADGRL3Q9HAR2 1447 aa32.7■■■□□ 2.82
TGFBR1-207ENST00000549766 NME9Q86XW9 330 aa32.69■■■□□ 2.82
TGFBR1-207ENST00000549766 COL3A1P02461 1466 aaPredicted RBP32.68■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms