RNA–Protein interactions for RNA: ENST00000549613.1

CALCOCO1-214, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 884 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-214ENST00000549613 PRKRIP1Q9H875 184 aaPredicted RBP18.75■□□□□ 0.59
CALCOCO1-214ENST00000549613 PIK3R4Q99570 1358 aa18.74■□□□□ 0.59
CALCOCO1-214ENST00000549613 SAFB2Q14151 953 aaKnown RBP eCLIP18.74■□□□□ 0.59
CALCOCO1-214ENST00000549613 KNDC1Q76NI1 1749 aa18.74■□□□□ 0.59
CALCOCO1-214ENST00000549613 KTN1Q86UP2 1357 aaKnown RBP18.73■□□□□ 0.59
CALCOCO1-214ENST00000549613 PER1O15534 1290 aaPredicted RBP18.72■□□□□ 0.59
CALCOCO1-214ENST00000549613 WAPLQ7Z5K2 1190 aa18.72■□□□□ 0.59
CALCOCO1-214ENST00000549613 MINK1Q8N4C8 1332 aaPredicted RBP18.72■□□□□ 0.59
CALCOCO1-214ENST00000549613 CPS1P31327 1500 aa18.7■□□□□ 0.58
CALCOCO1-214ENST00000549613 SRPK2P78362 688 aaKnown RBP18.7■□□□□ 0.58
CALCOCO1-214ENST00000549613 RALBP1Q15311 655 aa18.7■□□□□ 0.58
CALCOCO1-214ENST00000549613 AMOTL2Q9Y2J4 779 aa18.7■□□□□ 0.58
CALCOCO1-214ENST00000549613 KNSTRNQ9Y448 316 aa18.7■□□□□ 0.58
CALCOCO1-214ENST00000549613 TULP4Q9NRJ4 1543 aa18.69■□□□□ 0.58
CALCOCO1-214ENST00000549613 ATAD2Q6PL18 1390 aa18.68■□□□□ 0.58
CALCOCO1-214ENST00000549613 NINLQ9Y2I6 1382 aa18.68■□□□□ 0.58
CALCOCO1-214ENST00000549613 TMC1Q8TDI8 760 aa18.68■□□□□ 0.58
CALCOCO1-214ENST00000549613 CDK19Q9BWU1 502 aa18.68■□□□□ 0.58
CALCOCO1-214ENST00000549613 NPHP4O75161 1426 aaPredicted RBP18.67■□□□□ 0.58
CALCOCO1-214ENST00000549613 CABP2Q9NPB3 220 aa18.67■□□□□ 0.58
CALCOCO1-214ENST00000549613 PLEKHH1Q9ULM0 1364 aa18.67■□□□□ 0.58
CALCOCO1-214ENST00000549613 PTPRUQ92729 1446 aa18.66■□□□□ 0.58
CALCOCO1-214ENST00000549613 WASLO00401 505 aaPredicted RBP18.65■□□□□ 0.58
CALCOCO1-214ENST00000549613 MYOM1P52179 1685 aa18.65■□□□□ 0.58
CALCOCO1-214ENST00000549613 ROBO2Q9HCK4 1378 aa18.65■□□□□ 0.58
CALCOCO1-214ENST00000549613 SLC12A5Q9H2X9 1139 aa18.64■□□□□ 0.57
CALCOCO1-214ENST00000549613 PTCH1Q13635 1447 aa18.64■□□□□ 0.57
CALCOCO1-214ENST00000549613 STRCQ7RTU9 1775 aa18.63■□□□□ 0.57
CALCOCO1-214ENST00000549613 NCKAP5LQ9HCH0 1330 aa18.63■□□□□ 0.57
CALCOCO1-214ENST00000549613 NPC1L1Q9UHC9 1359 aa18.63■□□□□ 0.57
CALCOCO1-214ENST00000549613 TERF2IPQ9NYB0 399 aa18.61■□□□□ 0.57
CALCOCO1-214ENST00000549613 CNGB1Q14028 1251 aaPredicted RBP18.6■□□□□ 0.57
CALCOCO1-214ENST00000549613 ANKRD36BQ8N2N9 1353 aa18.59■□□□□ 0.57
CALCOCO1-214ENST00000549613 PARD3Q8TEW0 1356 aa18.59■□□□□ 0.57
CALCOCO1-214ENST00000549613 MYBBP1AQ9BQG0 1328 aaKnown RBP18.59■□□□□ 0.57
CALCOCO1-214ENST00000549613 AMER1Q5JTC6 1135 aaPredicted RBP18.59■□□□□ 0.57
CALCOCO1-214ENST00000549613 XRN1Q8IZH2 1706 aaKnown RBP18.59■□□□□ 0.57
CALCOCO1-214ENST00000549613 IQSEC2Q5JU85 1478 aa18.58■□□□□ 0.57
CALCOCO1-214ENST00000549613 KCNA6P17658 529 aa18.58■□□□□ 0.56
CALCOCO1-214ENST00000549613 CC2D1BQ5T0F9 858 aaKnown RBP18.58■□□□□ 0.56
CALCOCO1-214ENST00000549613 HDGFL2Q7Z4V5 671 aaPredicted RBP18.58■□□□□ 0.56
CALCOCO1-214ENST00000549613 CARD14Q9BXL6 1004 aa18.58■□□□□ 0.56
CALCOCO1-214ENST00000549613 MRS2Q9HD23 443 aa18.58■□□□□ 0.56
CALCOCO1-214ENST00000549613 CHD2O14647 1828 aaKnown RBP18.58■□□□□ 0.56
CALCOCO1-214ENST00000549613 LTBP4Q8N2S1 1624 aa18.56■□□□□ 0.56
CALCOCO1-214ENST00000549613 ADGRB2O60241 1585 aa18.56■□□□□ 0.56
CALCOCO1-214ENST00000549613 NUDT16Q96DE0 195 aaKnown RBP18.56■□□□□ 0.56
CALCOCO1-214ENST00000549613 YTHDC1Q96MU7 727 aaKnown RBP18.56■□□□□ 0.56
CALCOCO1-214ENST00000549613 CCDC61Q9Y6R9 512 aa18.56■□□□□ 0.56
CALCOCO1-214ENST00000549613 CABP1Q9NZU7 370 aa18.55■□□□□ 0.56
CALCOCO1-214ENST00000549613 CENPBP07199 599 aaPredicted RBP18.54■□□□□ 0.56
CALCOCO1-214ENST00000549613 NLRP13Q86W25 1043 aa18.54■□□□□ 0.56
CALCOCO1-214ENST00000549613 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.54■□□□□ 0.56
CALCOCO1-214ENST00000549613 BRD4O60885 1362 aaPredicted RBP18.54■□□□□ 0.56
CALCOCO1-214ENST00000549613 CGNL1Q0VF96 1302 aa18.53■□□□□ 0.56
CALCOCO1-214ENST00000549613 UBAP1LF5GYI3 381 aa18.53■□□□□ 0.56
CALCOCO1-214ENST00000549613 NSD3Q9BZ95 1437 aa18.53■□□□□ 0.56
CALCOCO1-214ENST00000549613 ATP7BP35670 1465 aa18.52■□□□□ 0.55
CALCOCO1-214ENST00000549613 NSD2O96028 1365 aa18.51■□□□□ 0.55
CALCOCO1-214ENST00000549613 USP32Q8NFA0 1604 aa18.5■□□□□ 0.55
CALCOCO1-214ENST00000549613 CCDC184Q52MB2 194 aa18.5■□□□□ 0.55
CALCOCO1-214ENST00000549613 ZNF692Q9BU19 519 aaPredicted RBP18.5■□□□□ 0.55
CALCOCO1-214ENST00000549613 A0A1W2PP64 1363 aa18.5■□□□□ 0.55
CALCOCO1-214ENST00000549613 PPIP5K1Q6PFW1 1433 aa18.49■□□□□ 0.55
CALCOCO1-214ENST00000549613 PLEKHG3A1L390 1219 aa18.48■□□□□ 0.55
CALCOCO1-214ENST00000549613 MORC1Q86VD1 984 aa18.48■□□□□ 0.55
CALCOCO1-214ENST00000549613 NWD1Q149M9 1564 aa18.47■□□□□ 0.55
CALCOCO1-214ENST00000549613 PPP2R1AP30153 589 aa18.47■□□□□ 0.55
CALCOCO1-214ENST00000549613 PROSER2Q86WR7 435 aaPredicted RBP18.47■□□□□ 0.55
CALCOCO1-214ENST00000549613 PRR36Q9H6K5 1346 aa18.47■□□□□ 0.55
CALCOCO1-214ENST00000549613 MED1Q15648 1581 aaPredicted RBP18.47■□□□□ 0.55
CALCOCO1-214ENST00000549613 CD163L1Q9NR16 1453 aa18.46■□□□□ 0.55
CALCOCO1-214ENST00000549613 CPSF1Q10570 1443 aaKnown RBP18.45■□□□□ 0.54
CALCOCO1-214ENST00000549613 ANKARQ7Z5J8 1434 aa18.45■□□□□ 0.54
CALCOCO1-214ENST00000549613 NKTRP30414 1462 aaKnown RBP18.45■□□□□ 0.54
CALCOCO1-214ENST00000549613 C14orf37Q86TY3 774 aa18.44■□□□□ 0.54
CALCOCO1-214ENST00000549613 FAM9BQ8IZU0 186 aa18.44■□□□□ 0.54
CALCOCO1-214ENST00000549613 PNISRQ8TF01 805 aaKnown RBP18.43■□□□□ 0.54
CALCOCO1-214ENST00000549613 PHF23Q9BUL5 403 aaPredicted RBP18.43■□□□□ 0.54
CALCOCO1-214ENST00000549613 CDC42BPGQ6DT37 1551 aa18.42■□□□□ 0.54
CALCOCO1-214ENST00000549613 ADGRL3Q9HAR2 1447 aa18.42■□□□□ 0.54
CALCOCO1-214ENST00000549613 EDC4Q6P2E9 1401 aaKnown RBP18.41■□□□□ 0.54
CALCOCO1-214ENST00000549613 NCOA3Q9Y6Q9 1424 aa18.41■□□□□ 0.54
CALCOCO1-214ENST00000549613 NUTM2FA1L443 756 aa18.41■□□□□ 0.54
CALCOCO1-214ENST00000549613 FYB1O15117 783 aa18.4■□□□□ 0.54
CALCOCO1-214ENST00000549613 ACEP12821 1306 aa18.4■□□□□ 0.54
CALCOCO1-214ENST00000549613 ITSN1Q15811 1721 aa18.4■□□□□ 0.54
CALCOCO1-214ENST00000549613 TOPAZ1Q8N9V7 1692 aa18.39■□□□□ 0.53
CALCOCO1-214ENST00000549613 HSPA1LP34931 641 aa18.39■□□□□ 0.53
CALCOCO1-214ENST00000549613 FMN2Q9NZ56 1722 aa18.39■□□□□ 0.53
CALCOCO1-214ENST00000549613 NGDNQ8NEJ9 315 aaKnown RBP18.38■□□□□ 0.53
CALCOCO1-214ENST00000549613 C19orf44Q9H6X5 657 aa18.38■□□□□ 0.53
CALCOCO1-214ENST00000549613 AKAP12Q02952 1782 aa18.37■□□□□ 0.53
CALCOCO1-214ENST00000549613 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.37■□□□□ 0.53
CALCOCO1-214ENST00000549613 GGNBP2Q9H3C7 697 aa18.37■□□□□ 0.53
CALCOCO1-214ENST00000549613 NALCNQ8IZF0 1738 aa18.37■□□□□ 0.53
CALCOCO1-214ENST00000549613 MON2Q7Z3U7 1717 aa18.36■□□□□ 0.53
CALCOCO1-214ENST00000549613 POLR3AO14802 1390 aaPredicted RBP18.35■□□□□ 0.53
CALCOCO1-214ENST00000549613 HNRNPUQ00839 825 aaKnown RBP eCLIP18.35■□□□□ 0.53
CALCOCO1-214ENST00000549613 RBM33Q96EV2 1170 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms