RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 AFF2P51816 1311 aa14.11□□□□□ -0.15
GCN1-205ENST00000548821 RBM6P78332 1123 aaKnown RBP14.1□□□□□ -0.15
GCN1-205ENST00000548821 PSME1Q06323 249 aa14.1□□□□□ -0.15
GCN1-205ENST00000548821 QTRT2Q9H974 415 aaKnown RBP14.1□□□□□ -0.15
GCN1-205ENST00000548821 PNPLA6Q8IY17 1366 aa14.09□□□□□ -0.15
GCN1-205ENST00000548821 POGKQ9P215 609 aa14.09□□□□□ -0.15
GCN1-205ENST00000548821 PPLO60437 1756 aa14.09□□□□□ -0.15
GCN1-205ENST00000548821 TECPR2O15040 1411 aa14.08□□□□□ -0.15
GCN1-205ENST00000548821 TMEM132EQ6IEE7 984 aa14.08□□□□□ -0.16
GCN1-205ENST00000548821 PIK3C2GO75747 1445 aa14.07□□□□□ -0.16
GCN1-205ENST00000548821 CDK12Q9NYV4 1490 aaPredicted RBP14.07□□□□□ -0.16
GCN1-205ENST00000548821 ADAMTS2O95450 1211 aa14.07□□□□□ -0.16
GCN1-205ENST00000548821 WAPLQ7Z5K2 1190 aa14.07□□□□□ -0.16
GCN1-205ENST00000548821 TRPC5Q9UL62 973 aaPredicted RBP14.07□□□□□ -0.16
GCN1-205ENST00000548821 LRP6O75581 1613 aa14.07□□□□□ -0.16
GCN1-205ENST00000548821 NHSL1Q5SYE7 1610 aa14.07□□□□□ -0.16
GCN1-205ENST00000548821 RAB3GAP2Q9H2M9 1393 aa14.07□□□□□ -0.16
GCN1-205ENST00000548821 YTHDC2Q9H6S0 1430 aaKnown RBP14.07□□□□□ -0.16
GCN1-205ENST00000548821 FOXO3O43524 673 aa14.06□□□□□ -0.16
GCN1-205ENST00000548821 DDX17Q92841 729 aaKnown RBP14.06□□□□□ -0.16
GCN1-205ENST00000548821 USP21Q9UK80 565 aa14.06□□□□□ -0.16
GCN1-205ENST00000548821 HAP1P54257 671 aaPredicted RBP14.05□□□□□ -0.16
GCN1-205ENST00000548821 CDC42BPGQ6DT37 1551 aa14.05□□□□□ -0.16
GCN1-205ENST00000548821 NALCNQ8IZF0 1738 aa14.04□□□□□ -0.16
GCN1-205ENST00000548821 CFAP70Q5T0N1 1121 aa14.04□□□□□ -0.16
GCN1-205ENST00000548821 EIF3AQ14152 1382 aaKnown RBP14.04□□□□□ -0.16
GCN1-205ENST00000548821 FNBP4Q8N3X1 1017 aaPredicted RBP14.03□□□□□ -0.16
GCN1-205ENST00000548821 MYOM2P54296 1465 aa14.03□□□□□ -0.16
GCN1-205ENST00000548821 KRT28Q7Z3Y7 464 aa14.02□□□□□ -0.17
GCN1-205ENST00000548821 DCAF11Q8TEB1 546 aa14.02□□□□□ -0.17
GCN1-205ENST00000548821 PHF8Q9UPP1 1060 aa14.02□□□□□ -0.17
GCN1-205ENST00000548821 SETD1AO15047 1707 aaKnown RBP14.01□□□□□ -0.17
GCN1-205ENST00000548821 LAMC1P11047 1609 aa14.01□□□□□ -0.17
GCN1-205ENST00000548821 NUTM2FA1L443 756 aa14.01□□□□□ -0.17
GCN1-205ENST00000548821 UPF1Q92900 1129 aaKnown RBP eCLIP14.01□□□□□ -0.17
GCN1-205ENST00000548821 PRAM1Q96QH2 718 aa14.01□□□□□ -0.17
GCN1-205ENST00000548821 KDM2AQ9Y2K7 1162 aa14□□□□□ -0.17
GCN1-205ENST00000548821 CCDC125Q86Z20 511 aa13.99□□□□□ -0.17
GCN1-205ENST00000548821 NRXN1Q9ULB1 1477 aa13.99□□□□□ -0.17
GCN1-205ENST00000548821 SPATA31A3Q5VYP0 1347 aa13.98□□□□□ -0.17
GCN1-205ENST00000548821 ARHGEF10O15013 1369 aa13.97□□□□□ -0.17
GCN1-205ENST00000548821 GPRASP1Q5JY77 1395 aa13.97□□□□□ -0.17
GCN1-205ENST00000548821 TRAK1Q9UPV9 953 aa13.97□□□□□ -0.17
GCN1-205ENST00000548821 ATAD2Q6PL18 1390 aa13.96□□□□□ -0.17
GCN1-205ENST00000548821 KNDC1Q76NI1 1749 aa13.96□□□□□ -0.17
GCN1-205ENST00000548821 IFT172Q9UG01 1749 aa13.96□□□□□ -0.17
GCN1-205ENST00000548821 XPCQ01831 940 aaPredicted RBP13.96□□□□□ -0.17
GCN1-205ENST00000548821 SAFB2Q14151 953 aaKnown RBP eCLIP13.96□□□□□ -0.17
GCN1-205ENST00000548821 LMOD2Q6P5Q4 547 aa13.96□□□□□ -0.17
GCN1-205ENST00000548821 ANKARQ7Z5J8 1434 aa13.96□□□□□ -0.18
GCN1-205ENST00000548821 SBNO1A3KN83 1393 aa13.96□□□□□ -0.18
GCN1-205ENST00000548821 PLEKHH1Q9ULM0 1364 aa13.96□□□□□ -0.18
GCN1-205ENST00000548821 DLC1Q96QB1 1528 aa13.95□□□□□ -0.18
GCN1-205ENST00000548821 UNC5CLQ8IV45 518 aa13.95□□□□□ -0.18
GCN1-205ENST00000548821 KIF1AQ12756 1690 aa13.95□□□□□ -0.18
GCN1-205ENST00000548821 PXDNQ92626 1479 aa13.94□□□□□ -0.18
GCN1-205ENST00000548821 GJD4Q96KN9 370 aaPredicted RBP13.94□□□□□ -0.18
GCN1-205ENST00000548821 COL22A1Q8NFW1 1626 aaPredicted RBP13.93□□□□□ -0.18
GCN1-205ENST00000548821 WASLO00401 505 aaPredicted RBP13.93□□□□□ -0.18
GCN1-205ENST00000548821 NGDNQ8NEJ9 315 aaKnown RBP13.93□□□□□ -0.18
GCN1-205ENST00000548821 TNS3Q68CZ2 1445 aa13.91□□□□□ -0.18
GCN1-205ENST00000548821 MINK1Q8N4C8 1332 aaPredicted RBP13.9□□□□□ -0.18
GCN1-205ENST00000548821 ATRNO75882 1429 aa13.9□□□□□ -0.18
GCN1-205ENST00000548821 PMFBP1Q8TBY8 1022 aa13.9□□□□□ -0.18
GCN1-205ENST00000548821 CCDC9Q9Y3X0 531 aaKnown RBP13.9□□□□□ -0.18
GCN1-205ENST00000548821 FMN2Q9NZ56 1722 aa13.9□□□□□ -0.18
GCN1-205ENST00000548821 RGS12O14924 1447 aa13.9□□□□□ -0.19
GCN1-205ENST00000548821 SF3B2Q13435 895 aaKnown RBP13.89□□□□□ -0.19
GCN1-205ENST00000548821 HIRIP3Q9BW71 556 aaPredicted RBP13.89□□□□□ -0.19
GCN1-205ENST00000548821 PAK3O75914 559 aaPredicted RBP13.88□□□□□ -0.19
GCN1-205ENST00000548821 VPS72Q15906 364 aa13.88□□□□□ -0.19
GCN1-205ENST00000548821 BCL9LQ86UU0 1499 aa13.87□□□□□ -0.19
GCN1-205ENST00000548821 NUDT16Q96DE0 195 aaKnown RBP13.86□□□□□ -0.19
GCN1-205ENST00000548821 ZRANB1Q9UGI0 708 aa13.86□□□□□ -0.19
GCN1-205ENST00000548821 CCDC61Q9Y6R9 512 aa13.86□□□□□ -0.19
GCN1-205ENST00000548821 ADGRB1O14514 1584 aa13.84□□□□□ -0.19
GCN1-205ENST00000548821 ADGRB2O60241 1585 aa13.84□□□□□ -0.19
GCN1-205ENST00000548821 CDK19Q9BWU1 502 aa13.84□□□□□ -0.19
GCN1-205ENST00000548821 SLIT2O94813 1529 aa13.84□□□□□ -0.19
GCN1-205ENST00000548821 TULP4Q9NRJ4 1543 aa13.84□□□□□ -0.19
GCN1-205ENST00000548821 ONECUT3O60422 494 aaPredicted RBP13.83□□□□□ -0.2
GCN1-205ENST00000548821 CABLES1Q8TDN4 633 aa13.83□□□□□ -0.2
GCN1-205ENST00000548821 A0A0G2JS52 829 aa13.82□□□□□ -0.2
GCN1-205ENST00000548821 PLEKHG5O94827 1062 aa13.82□□□□□ -0.2
GCN1-205ENST00000548821 MYT1Q01538 1121 aa13.82□□□□□ -0.2
GCN1-205ENST00000548821 FAM83GA6ND36 823 aa13.81□□□□□ -0.2
GCN1-205ENST00000548821 SRPK2P78362 688 aaKnown RBP13.81□□□□□ -0.2
GCN1-205ENST00000548821 SEPT12Q8IYM1 358 aa13.81□□□□□ -0.2
GCN1-205ENST00000548821 BTG4Q9NY30 223 aa13.81□□□□□ -0.2
GCN1-205ENST00000548821 BRD4O60885 1362 aaPredicted RBP13.81□□□□□ -0.2
GCN1-205ENST00000548821 PLEKHG3A1L390 1219 aa13.8□□□□□ -0.2
GCN1-205ENST00000548821 KRT27Q7Z3Y8 459 aa13.8□□□□□ -0.2
GCN1-205ENST00000548821 PRDM11Q9NQV5 511 aa13.8□□□□□ -0.2
GCN1-205ENST00000548821 CENPJQ9HC77 1338 aaPredicted RBP13.8□□□□□ -0.2
GCN1-205ENST00000548821 RALGAPBQ86X10 1494 aa13.8□□□□□ -0.2
GCN1-205ENST00000548821 USP32Q8NFA0 1604 aa13.79□□□□□ -0.2
GCN1-205ENST00000548821 MARF1Q9Y4F3 1742 aaKnown RBP13.79□□□□□ -0.2
GCN1-205ENST00000548821 EVA1CP58658 441 aa13.79□□□□□ -0.2
GCN1-205ENST00000548821 NBPF8Q3BBV2 869 aa13.79□□□□□ -0.2
GCN1-205ENST00000548821 NLRP13Q86W25 1043 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms