RNA–Protein interactions for RNA: ENST00000547555.5

LETMD1-210, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 1,658 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-210ENST00000547555 PTPRUQ92729 1446 aa22.84■■□□□ 1.25
LETMD1-210ENST00000547555 GPRASP1Q5JY77 1395 aa22.84■■□□□ 1.25
LETMD1-210ENST00000547555 KIF7Q2M1P5 1343 aa22.82■■□□□ 1.24
LETMD1-210ENST00000547555 IPO9Q96P70 1041 aaKnown RBP22.82■■□□□ 1.24
LETMD1-210ENST00000547555 IRX6P78412 446 aaPredicted RBP22.81■■□□□ 1.24
LETMD1-210ENST00000547555 TECPR2O15040 1411 aa22.81■■□□□ 1.24
LETMD1-210ENST00000547555 LRPPRCP42704 1394 aaKnown RBP22.81■■□□□ 1.24
LETMD1-210ENST00000547555 NBPF1Q3BBV0 1214 aa22.81■■□□□ 1.24
LETMD1-210ENST00000547555 YTHDC2Q9H6S0 1430 aaKnown RBP22.8■■□□□ 1.24
LETMD1-210ENST00000547555 CPS1P31327 1500 aa22.8■■□□□ 1.24
LETMD1-210ENST00000547555 NKTRP30414 1462 aaKnown RBP22.79■■□□□ 1.24
LETMD1-210ENST00000547555 TMEM132EQ6IEE7 984 aa22.79■■□□□ 1.24
LETMD1-210ENST00000547555 B4GALNT3Q6L9W6 998 aa22.79■■□□□ 1.24
LETMD1-210ENST00000547555 FAM9BQ8IZU0 186 aa22.79■■□□□ 1.24
LETMD1-210ENST00000547555 KCNA6P17658 529 aa22.78■■□□□ 1.24
LETMD1-210ENST00000547555 INSRP06213 1382 aa22.78■■□□□ 1.24
LETMD1-210ENST00000547555 DLC1Q96QB1 1528 aa22.78■■□□□ 1.24
LETMD1-210ENST00000547555 ARHGEF28Q8N1W1 1705 aaKnown RBP22.77■■□□□ 1.24
LETMD1-210ENST00000547555 USP35Q9P2H5 1018 aa22.77■■□□□ 1.24
LETMD1-210ENST00000547555 ABCC11Q96J66 1382 aa22.77■■□□□ 1.24
LETMD1-210ENST00000547555 PTCH1Q13635 1447 aa22.77■■□□□ 1.24
LETMD1-210ENST00000547555 ZNF335Q9H4Z2 1342 aaPredicted RBP22.77■■□□□ 1.23
LETMD1-210ENST00000547555 CCDC184Q52MB2 194 aa22.76■■□□□ 1.23
LETMD1-210ENST00000547555 LTBP4Q8N2S1 1624 aa22.76■■□□□ 1.23
LETMD1-210ENST00000547555 C11orf95C9JLR9 678 aaPredicted RBP22.75■■□□□ 1.23
LETMD1-210ENST00000547555 AMOTL2Q9Y2J4 779 aa22.74■■□□□ 1.23
LETMD1-210ENST00000547555 CCDC136Q96JN2 1154 aa22.73■■□□□ 1.23
LETMD1-210ENST00000547555 RTL5Q5HYW3 569 aaPredicted RBP22.71■■□□□ 1.23
LETMD1-210ENST00000547555 FAM135BQ49AJ0 1406 aa22.71■■□□□ 1.23
LETMD1-210ENST00000547555 XIRP1Q702N8 1843 aaKnown RBP22.71■■□□□ 1.23
LETMD1-210ENST00000547555 ROBO2Q9HCK4 1378 aa22.71■■□□□ 1.23
LETMD1-210ENST00000547555 ZBTB47Q9UFB7 747 aaPredicted RBP22.71■■□□□ 1.23
LETMD1-210ENST00000547555 BRD4O60885 1362 aaPredicted RBP22.7■■□□□ 1.22
LETMD1-210ENST00000547555 CARD11Q9BXL7 1154 aa22.7■■□□□ 1.22
LETMD1-210ENST00000547555 TCERG1O14776 1098 aaKnown RBP22.69■■□□□ 1.22
LETMD1-210ENST00000547555 MS4A1P11836 297 aa22.69■■□□□ 1.22
LETMD1-210ENST00000547555 SIRT1Q96EB6 747 aa22.69■■□□□ 1.22
LETMD1-210ENST00000547555 STK26Q9P289 416 aa22.69■■□□□ 1.22
LETMD1-210ENST00000547555 PDE3BQ13370 1112 aa22.68■■□□□ 1.22
LETMD1-210ENST00000547555 TRAK1Q9UPV9 953 aa22.68■■□□□ 1.22
LETMD1-210ENST00000547555 LRRC7Q96NW7 1537 aa22.68■■□□□ 1.22
LETMD1-210ENST00000547555 RALBP1Q15311 655 aa22.65■■□□□ 1.22
LETMD1-210ENST00000547555 PNISRQ8TF01 805 aaKnown RBP22.65■■□□□ 1.22
LETMD1-210ENST00000547555 NCOA3Q9Y6Q9 1424 aa22.65■■□□□ 1.22
LETMD1-210ENST00000547555 QRICH2Q9H0J4 1663 aa22.64■■□□□ 1.22
LETMD1-210ENST00000547555 NALCNQ8IZF0 1738 aa22.64■■□□□ 1.21
LETMD1-210ENST00000547555 EIF3AQ14152 1382 aaKnown RBP22.64■■□□□ 1.21
LETMD1-210ENST00000547555 USP47Q96K76 1375 aa22.64■■□□□ 1.21
LETMD1-210ENST00000547555 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.63■■□□□ 1.21
LETMD1-210ENST00000547555 PLEKHH1Q9ULM0 1364 aa22.63■■□□□ 1.21
LETMD1-210ENST00000547555 PRAM1Q96QH2 718 aa22.62■■□□□ 1.21
LETMD1-210ENST00000547555 TMEM94Q12767 1356 aa22.61■■□□□ 1.21
LETMD1-210ENST00000547555 ADGRB2O60241 1585 aa22.61■■□□□ 1.21
LETMD1-210ENST00000547555 PROSER2Q86WR7 435 aaPredicted RBP22.61■■□□□ 1.21
LETMD1-210ENST00000547555 WAPLQ7Z5K2 1190 aa22.6■■□□□ 1.21
LETMD1-210ENST00000547555 ADGRL3Q9HAR2 1447 aa22.59■■□□□ 1.21
LETMD1-210ENST00000547555 CENPJQ9HC77 1338 aaPredicted RBP22.58■■□□□ 1.21
LETMD1-210ENST00000547555 SBNO2Q9Y2G9 1366 aa22.58■■□□□ 1.21
LETMD1-210ENST00000547555 PPM1GO15355 546 aaPredicted RBP22.57■■□□□ 1.2
LETMD1-210ENST00000547555 CDC42BPGQ6DT37 1551 aa22.57■■□□□ 1.2
LETMD1-210ENST00000547555 IQSEC2Q5JU85 1478 aa22.56■■□□□ 1.2
LETMD1-210ENST00000547555 POGKQ9P215 609 aa22.56■■□□□ 1.2
LETMD1-210ENST00000547555 PAK3O75914 559 aaPredicted RBP22.55■■□□□ 1.2
LETMD1-210ENST00000547555 MYBBP1AQ9BQG0 1328 aaKnown RBP22.55■■□□□ 1.2
LETMD1-210ENST00000547555 RBM33Q96EV2 1170 aaKnown RBP22.55■■□□□ 1.2
LETMD1-210ENST00000547555 DCCP43146 1447 aa22.54■■□□□ 1.2
LETMD1-210ENST00000547555 TMC1Q8TDI8 760 aa22.53■■□□□ 1.2
LETMD1-210ENST00000547555 ST20-MTHFSA0A0A6YYL1 179 aa22.52■■□□□ 1.2
LETMD1-210ENST00000547555 SAFB2Q14151 953 aaKnown RBP eCLIP22.52■■□□□ 1.2
LETMD1-210ENST00000547555 FMN2Q9NZ56 1722 aa22.5■■□□□ 1.19
LETMD1-210ENST00000547555 TULP4Q9NRJ4 1543 aa22.5■■□□□ 1.19
LETMD1-210ENST00000547555 MSH6P52701 1360 aa22.5■■□□□ 1.19
LETMD1-210ENST00000547555 RRP1P56182 461 aaKnown RBP22.5■■□□□ 1.19
LETMD1-210ENST00000547555 DDRGK1Q96HY6 314 aa22.5■■□□□ 1.19
LETMD1-210ENST00000547555 TESK2Q96S53 571 aa22.5■■□□□ 1.19
LETMD1-210ENST00000547555 C19orf44Q9H6X5 657 aa22.49■■□□□ 1.19
LETMD1-210ENST00000547555 MINK1Q8N4C8 1332 aaPredicted RBP22.49■■□□□ 1.19
LETMD1-210ENST00000547555 C14orf37Q86TY3 774 aa22.47■■□□□ 1.19
LETMD1-210ENST00000547555 CERKQ8TCT0 537 aa22.47■■□□□ 1.19
LETMD1-210ENST00000547555 SLC24A1O60721 1099 aa22.44■■□□□ 1.18
LETMD1-210ENST00000547555 NBR1Q14596 966 aa22.44■■□□□ 1.18
LETMD1-210ENST00000547555 BACH2Q9BYV9 841 aa22.44■■□□□ 1.18
LETMD1-210ENST00000547555 USP32Q8NFA0 1604 aa22.44■■□□□ 1.18
LETMD1-210ENST00000547555 WASLO00401 505 aaPredicted RBP22.42■■□□□ 1.18
LETMD1-210ENST00000547555 NLRP13Q86W25 1043 aa22.42■■□□□ 1.18
LETMD1-210ENST00000547555 PARD3Q8TEW0 1356 aa22.42■■□□□ 1.18
LETMD1-210ENST00000547555 CADPS2Q86UW7 1296 aa22.42■■□□□ 1.18
LETMD1-210ENST00000547555 RCAN3Q9UKA8 241 aa22.42■■□□□ 1.18
LETMD1-210ENST00000547555 MST1RQ04912 1400 aa22.41■■□□□ 1.18
LETMD1-210ENST00000547555 EVC2Q86UK5 1308 aa22.41■■□□□ 1.18
LETMD1-210ENST00000547555 RGPD8O14715 1765 aaPredicted RBP22.41■■□□□ 1.18
LETMD1-210ENST00000547555 ANKARQ7Z5J8 1434 aa22.41■■□□□ 1.18
LETMD1-210ENST00000547555 TOPAZ1Q8N9V7 1692 aa22.41■■□□□ 1.18
LETMD1-210ENST00000547555 ITSN1Q15811 1721 aa22.4■■□□□ 1.18
LETMD1-210ENST00000547555 ATP7BP35670 1465 aa22.4■■□□□ 1.18
LETMD1-210ENST00000547555 DISP3Q9P2K9 1392 aa22.4■■□□□ 1.18
LETMD1-210ENST00000547555 ATF3P18847 181 aa22.39■■□□□ 1.18
LETMD1-210ENST00000547555 PDE4AP27815 886 aa22.39■■□□□ 1.18
LETMD1-210ENST00000547555 TMF1P82094 1093 aa22.38■■□□□ 1.17
LETMD1-210ENST00000547555 CDK19Q9BWU1 502 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms