RNA–Protein interactions for RNA: ENST00000547530.6

BRF1-211, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRF1, Length 3,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-211ENST00000547530 SSFA2P28290 1259 aa19.01■□□□□ 0.63
BRF1-211ENST00000547530 MCTP1Q6DN14 999 aa19.01■□□□□ 0.63
BRF1-211ENST00000547530 RNF214Q8ND24 703 aa19.01■□□□□ 0.63
BRF1-211ENST00000547530 MINK1Q8N4C8 1332 aaPredicted RBP19■□□□□ 0.63
BRF1-211ENST00000547530 ATP10BO94823 1461 aa19■□□□□ 0.63
BRF1-211ENST00000547530 DTNBO60941 627 aa19■□□□□ 0.63
BRF1-211ENST00000547530 RAPGEF6Q8TEU7 1601 aa18.99■□□□□ 0.63
BRF1-211ENST00000547530 BCL11BQ9C0K0 894 aaPredicted RBP18.99■□□□□ 0.63
BRF1-211ENST00000547530 EIF3AQ14152 1382 aaKnown RBP18.99■□□□□ 0.63
BRF1-211ENST00000547530 ARHGAP5Q13017 1502 aa18.99■□□□□ 0.63
BRF1-211ENST00000547530 MRE11P49959 708 aa18.98■□□□□ 0.63
BRF1-211ENST00000547530 PLPPR3Q6T4P5 718 aa18.98■□□□□ 0.63
BRF1-211ENST00000547530 PLA2R1Q13018 1463 aa18.98■□□□□ 0.63
BRF1-211ENST00000547530 CD2BP2O95400 341 aaKnown RBP18.98■□□□□ 0.63
BRF1-211ENST00000547530 NSD3Q9BZ95 1437 aa18.97■□□□□ 0.63
BRF1-211ENST00000547530 CAVIN1Q6NZI2 390 aaKnown RBP18.97■□□□□ 0.63
BRF1-211ENST00000547530 ERBB4Q15303 1308 aa18.96■□□□□ 0.63
BRF1-211ENST00000547530 GBP4Q96PP9 640 aa18.96■□□□□ 0.63
BRF1-211ENST00000547530 NUTM2FA1L443 756 aa18.96■□□□□ 0.63
BRF1-211ENST00000547530 GRIN2AQ12879 1464 aa18.96■□□□□ 0.63
BRF1-211ENST00000547530 MSNP26038 577 aaKnown RBP18.95■□□□□ 0.62
BRF1-211ENST00000547530 TRMT2AQ8IZ69 625 aaKnown RBP18.95■□□□□ 0.62
BRF1-211ENST00000547530 R3HCC1Q9Y3T6 440 aaKnown RBP18.95■□□□□ 0.62
BRF1-211ENST00000547530 GOLGA6L22H0YM25 854 aa18.95■□□□□ 0.62
BRF1-211ENST00000547530 RSPH4AQ5TD94 716 aa18.94■□□□□ 0.62
BRF1-211ENST00000547530 KIAA0556O60303 1618 aa18.93■□□□□ 0.62
BRF1-211ENST00000547530 DNTTIP2Q5QJE6 756 aaKnown RBP18.93■□□□□ 0.62
BRF1-211ENST00000547530 ATF7IPQ6VMQ6 1270 aa18.93■□□□□ 0.62
BRF1-211ENST00000547530 DDX11L8A8MPP1 907 aa18.93■□□□□ 0.62
BRF1-211ENST00000547530 ATAD2Q6PL18 1390 aa18.93■□□□□ 0.62
BRF1-211ENST00000547530 PTMAP06454 111 aaKnown RBP18.92■□□□□ 0.62
BRF1-211ENST00000547530 KIAA1211Q6ZU35 1233 aa18.92■□□□□ 0.62
BRF1-211ENST00000547530 DDX19BQ9UMR2 479 aa18.92■□□□□ 0.62
BRF1-211ENST00000547530 NASPP49321 788 aaPredicted RBP18.92■□□□□ 0.62
BRF1-211ENST00000547530 DCTN1Q14203 1278 aa18.92■□□□□ 0.62
BRF1-211ENST00000547530 RBM27Q9P2N5 1060 aaKnown RBP18.92■□□□□ 0.62
BRF1-211ENST00000547530 C16orf71Q8IYS4 520 aaPredicted RBP18.91■□□□□ 0.62
BRF1-211ENST00000547530 STAG3Q9UJ98 1225 aa18.91■□□□□ 0.62
BRF1-211ENST00000547530 KIF21AQ7Z4S6 1674 aa18.91■□□□□ 0.62
BRF1-211ENST00000547530 GPRASP1Q5JY77 1395 aa18.91■□□□□ 0.62
BRF1-211ENST00000547530 CCDC141Q6ZP82 1450 aa18.9■□□□□ 0.62
BRF1-211ENST00000547530 WDR7Q9Y4E6 1490 aa18.9■□□□□ 0.62
BRF1-211ENST00000547530 SMARCA5O60264 1052 aaPredicted RBP18.89■□□□□ 0.61
BRF1-211ENST00000547530 PRPF40AO75400 957 aaKnown RBP18.89■□□□□ 0.61
BRF1-211ENST00000547530 XPCQ01831 940 aaPredicted RBP18.89■□□□□ 0.61
BRF1-211ENST00000547530 GAS2L2Q8NHY3 880 aa18.89■□□□□ 0.61
BRF1-211ENST00000547530 ZNF428Q96B54 188 aa18.89■□□□□ 0.61
BRF1-211ENST00000547530 TMPOP42166 694 aaKnown RBP18.89■□□□□ 0.61
BRF1-211ENST00000547530 CHD1LQ86WJ1 897 aa18.89■□□□□ 0.61
BRF1-211ENST00000547530 CALD1Q05682 793 aaKnown RBP18.88■□□□□ 0.61
BRF1-211ENST00000547530 SLC4A10Q6U841 1118 aa18.88■□□□□ 0.61
BRF1-211ENST00000547530 NECTIN2Q92692 538 aa18.88■□□□□ 0.61
BRF1-211ENST00000547530 SYCP2Q9BX26 1530 aa18.88■□□□□ 0.61
BRF1-211ENST00000547530 ARHGEF12Q9NZN5 1544 aa18.88■□□□□ 0.61
BRF1-211ENST00000547530 PKP1Q13835 747 aa18.87■□□□□ 0.61
BRF1-211ENST00000547530 TSHZ3Q63HK5 1081 aa18.87■□□□□ 0.61
BRF1-211ENST00000547530 ADAMTS12P58397 1594 aa18.87■□□□□ 0.61
BRF1-211ENST00000547530 PRKAR2BP31323 418 aa18.86■□□□□ 0.61
BRF1-211ENST00000547530 CLCN1P35523 988 aa18.86■□□□□ 0.61
BRF1-211ENST00000547530 IPO8O15397 1037 aaKnown RBP18.86■□□□□ 0.61
BRF1-211ENST00000547530 ADGRL2O95490 1459 aa18.86■□□□□ 0.61
BRF1-211ENST00000547530 TSPYL6Q8N831 410 aa18.85■□□□□ 0.61
BRF1-211ENST00000547530 MRC2Q9UBG0 1479 aa18.85■□□□□ 0.61
BRF1-211ENST00000547530 PRDM10Q9NQV6 1147 aa18.85■□□□□ 0.61
BRF1-211ENST00000547530 ASXL1Q8IXJ9 1541 aa18.85■□□□□ 0.61
BRF1-211ENST00000547530 KDM5DQ9BY66 1539 aa18.84■□□□□ 0.61
BRF1-211ENST00000547530 TBC1D9Q6ZT07 1266 aa18.84■□□□□ 0.61
BRF1-211ENST00000547530 WDR63Q8IWG1 891 aa18.84■□□□□ 0.61
BRF1-211ENST00000547530 FAM83GA6ND36 823 aa18.84■□□□□ 0.61
BRF1-211ENST00000547530 LARP6Q9BRS8 491 aaKnown RBP18.83■□□□□ 0.61
BRF1-211ENST00000547530 KANK1Q14678 1352 aa18.83■□□□□ 0.6
BRF1-211ENST00000547530 TARBP1Q13395 1621 aaKnown RBP18.83■□□□□ 0.6
BRF1-211ENST00000547530 OTUD7AQ8TE49 926 aaPredicted RBP18.82■□□□□ 0.6
BRF1-211ENST00000547530 KRT24Q2M2I5 525 aa18.82■□□□□ 0.6
BRF1-211ENST00000547530 GDPD2Q9HCC8 539 aa18.82■□□□□ 0.6
BRF1-211ENST00000547530 INSRP06213 1382 aa18.82■□□□□ 0.6
BRF1-211ENST00000547530 FAM177BA6PVY3 158 aa18.82■□□□□ 0.6
BRF1-211ENST00000547530 SCAPERQ9BY12 1400 aa18.82■□□□□ 0.6
BRF1-211ENST00000547530 SYNJ2O15056 1496 aa18.81■□□□□ 0.6
BRF1-211ENST00000547530 MIS18AQ9NYP9 233 aa18.81■□□□□ 0.6
BRF1-211ENST00000547530 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.8■□□□□ 0.6
BRF1-211ENST00000547530 FSD2A1L4K1 749 aa18.8■□□□□ 0.6
BRF1-211ENST00000547530 DIAPH1O60610 1272 aaKnown RBP18.8■□□□□ 0.6
BRF1-211ENST00000547530 ZGPATQ8N5A5 531 aaKnown RBP18.8■□□□□ 0.6
BRF1-211ENST00000547530 K7ELQ4 463 aaPredicted RBP18.8■□□□□ 0.6
BRF1-211ENST00000547530 SCAF11Q99590 1463 aaKnown RBP18.8■□□□□ 0.6
BRF1-211ENST00000547530 TRAPPC8Q9Y2L5 1435 aa18.79■□□□□ 0.6
BRF1-211ENST00000547530 TSC1Q92574 1164 aa18.78■□□□□ 0.6
BRF1-211ENST00000547530 POLR1AO95602 1720 aaPredicted RBP18.78■□□□□ 0.6
BRF1-211ENST00000547530 SYCE3A1L190 88 aa18.78■□□□□ 0.6
BRF1-211ENST00000547530 CHMP3Q9Y3E7 222 aa18.78■□□□□ 0.6
BRF1-211ENST00000547530 MLECQ14165 292 aa18.77■□□□□ 0.6
BRF1-211ENST00000547530 ZNF830Q96NB3 372 aaPredicted RBP18.77■□□□□ 0.6
BRF1-211ENST00000547530 JARID2Q92833 1246 aaPredicted RBP18.76■□□□□ 0.59
BRF1-211ENST00000547530 PHACTR3Q96KR7 559 aa18.76■□□□□ 0.59
BRF1-211ENST00000547530 CABP1Q9NZU7 370 aa18.76■□□□□ 0.59
BRF1-211ENST00000547530 TRIM35Q9UPQ4 493 aa18.76■□□□□ 0.59
BRF1-211ENST00000547530 PBRM1Q86U86 1689 aa18.76■□□□□ 0.59
BRF1-211ENST00000547530 IFT140Q96RY7 1462 aa18.76■□□□□ 0.59
BRF1-211ENST00000547530 BAG4O95429 457 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms