RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 NUTM2AQ8IVF1 878 aaPredicted RBP21.24■□□□□ 0.99
COL2A1-209ENST00000546974 STK26Q9P289 416 aa21.24■□□□□ 0.99
COL2A1-209ENST00000546974 CDC42BPGQ6DT37 1551 aa21.23■□□□□ 0.99
COL2A1-209ENST00000546974 PNPLA6Q8IY17 1366 aa21.23■□□□□ 0.99
COL2A1-209ENST00000546974 NRXN1Q9ULB1 1477 aa21.22■□□□□ 0.99
COL2A1-209ENST00000546974 HRCP23327 699 aa21.22■□□□□ 0.99
COL2A1-209ENST00000546974 WAPLQ7Z5K2 1190 aa21.22■□□□□ 0.99
COL2A1-209ENST00000546974 C14orf93Q9H972 538 aaKnown RBP21.22■□□□□ 0.99
COL2A1-209ENST00000546974 SOS2Q07890 1332 aaPredicted RBP21.22■□□□□ 0.99
COL2A1-209ENST00000546974 MYOM2P54296 1465 aa21.21■□□□□ 0.99
COL2A1-209ENST00000546974 YTHDC2Q9H6S0 1430 aaKnown RBP21.21■□□□□ 0.99
COL2A1-209ENST00000546974 SIRT1Q96EB6 747 aa21.2■□□□□ 0.98
COL2A1-209ENST00000546974 PLEKHH1Q9ULM0 1364 aa21.18■□□□□ 0.98
COL2A1-209ENST00000546974 ESCO1Q5FWF5 840 aa21.17■□□□□ 0.98
COL2A1-209ENST00000546974 CFAP70Q5T0N1 1121 aa21.17■□□□□ 0.98
COL2A1-209ENST00000546974 DHX57Q6P158 1386 aaKnown RBP21.16■□□□□ 0.98
COL2A1-209ENST00000546974 AFF2P51816 1311 aa21.15■□□□□ 0.98
COL2A1-209ENST00000546974 NPHP3Q7Z494 1330 aa21.15■□□□□ 0.98
COL2A1-209ENST00000546974 FMN2Q9NZ56 1722 aa21.13■□□□□ 0.97
COL2A1-209ENST00000546974 RXRBP28702 533 aa21.13■□□□□ 0.97
COL2A1-209ENST00000546974 C8orf37Q96NL8 207 aa21.13■□□□□ 0.97
COL2A1-209ENST00000546974 NUTM2FA1L443 756 aa21.11■□□□□ 0.97
COL2A1-209ENST00000546974 COL22A1Q8NFW1 1626 aaPredicted RBP21.11■□□□□ 0.97
COL2A1-209ENST00000546974 PXDNQ92626 1479 aa21.1■□□□□ 0.97
COL2A1-209ENST00000546974 FOXO3O43524 673 aa21.1■□□□□ 0.97
COL2A1-209ENST00000546974 STAC3Q96MF2 364 aa21.1■□□□□ 0.97
COL2A1-209ENST00000546974 ADAMTS2O95450 1211 aa21.09■□□□□ 0.97
COL2A1-209ENST00000546974 DLC1Q96QB1 1528 aa21.09■□□□□ 0.97
COL2A1-209ENST00000546974 CDK12Q9NYV4 1490 aaPredicted RBP21.08■□□□□ 0.97
COL2A1-209ENST00000546974 NGLY1Q96IV0 654 aa21.08■□□□□ 0.97
COL2A1-209ENST00000546974 PRAM1Q96QH2 718 aa21.07■□□□□ 0.96
COL2A1-209ENST00000546974 QTRT2Q9H974 415 aaKnown RBP21.07■□□□□ 0.96
COL2A1-209ENST00000546974 KIF1AQ12756 1690 aa21.07■□□□□ 0.96
COL2A1-209ENST00000546974 RGPD8O14715 1765 aaPredicted RBP21.06■□□□□ 0.96
COL2A1-209ENST00000546974 DCAF11Q8TEB1 546 aa21.06■□□□□ 0.96
COL2A1-209ENST00000546974 ADGRB1O14514 1584 aa21.06■□□□□ 0.96
COL2A1-209ENST00000546974 XPCQ01831 940 aaPredicted RBP21.05■□□□□ 0.96
COL2A1-209ENST00000546974 KDM2AQ9Y2K7 1162 aa21.05■□□□□ 0.96
COL2A1-209ENST00000546974 RBM6P78332 1123 aaKnown RBP21.04■□□□□ 0.96
COL2A1-209ENST00000546974 POGKQ9P215 609 aa21.04■□□□□ 0.96
COL2A1-209ENST00000546974 SAFB2Q14151 953 aaKnown RBP eCLIP21.03■□□□□ 0.96
COL2A1-209ENST00000546974 FNBP4Q8N3X1 1017 aaPredicted RBP21.02■□□□□ 0.96
COL2A1-209ENST00000546974 KRT28Q7Z3Y7 464 aa21.01■□□□□ 0.95
COL2A1-209ENST00000546974 USP21Q9UK80 565 aa21.01■□□□□ 0.95
COL2A1-209ENST00000546974 PHF8Q9UPP1 1060 aa21.01■□□□□ 0.95
COL2A1-209ENST00000546974 TRAK1Q9UPV9 953 aa21.01■□□□□ 0.95
COL2A1-209ENST00000546974 MARF1Q9Y4F3 1742 aaKnown RBP21.01■□□□□ 0.95
COL2A1-209ENST00000546974 SPATA31A3Q5VYP0 1347 aa21■□□□□ 0.95
COL2A1-209ENST00000546974 ADGRB2O60241 1585 aa20.99■□□□□ 0.95
COL2A1-209ENST00000546974 UPF1Q92900 1129 aaKnown RBP eCLIP20.99■□□□□ 0.95
COL2A1-209ENST00000546974 TRPC5Q9UL62 973 aaPredicted RBP20.98■□□□□ 0.95
COL2A1-209ENST00000546974 ANKARQ7Z5J8 1434 aa20.97■□□□□ 0.95
COL2A1-209ENST00000546974 PSME1Q06323 249 aa20.97■□□□□ 0.95
COL2A1-209ENST00000546974 RGS12O14924 1447 aa20.96■□□□□ 0.95
COL2A1-209ENST00000546974 USP32Q8NFA0 1604 aa20.96■□□□□ 0.95
COL2A1-209ENST00000546974 ATRNO75882 1429 aa20.95■□□□□ 0.94
COL2A1-209ENST00000546974 SBNO1A3KN83 1393 aa20.94■□□□□ 0.94
COL2A1-209ENST00000546974 TNS3Q68CZ2 1445 aa20.94■□□□□ 0.94
COL2A1-209ENST00000546974 HIRIP3Q9BW71 556 aaPredicted RBP20.93■□□□□ 0.94
COL2A1-209ENST00000546974 MINK1Q8N4C8 1332 aaPredicted RBP20.93■□□□□ 0.94
COL2A1-209ENST00000546974 EIF3AQ14152 1382 aaKnown RBP20.93■□□□□ 0.94
COL2A1-209ENST00000546974 BCL9LQ86UU0 1499 aa20.92■□□□□ 0.94
COL2A1-209ENST00000546974 WASLO00401 505 aaPredicted RBP20.91■□□□□ 0.94
COL2A1-209ENST00000546974 ARHGEF28Q8N1W1 1705 aaKnown RBP20.91■□□□□ 0.94
COL2A1-209ENST00000546974 PMFBP1Q8TBY8 1022 aa20.91■□□□□ 0.94
COL2A1-209ENST00000546974 KIAA1210Q9ULL0 1709 aa20.9■□□□□ 0.94
COL2A1-209ENST00000546974 TULP4Q9NRJ4 1543 aa20.9■□□□□ 0.94
COL2A1-209ENST00000546974 ARHGEF10O15013 1369 aa20.89■□□□□ 0.93
COL2A1-209ENST00000546974 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.89■□□□□ 0.93
COL2A1-209ENST00000546974 PRR36Q9H6K5 1346 aa20.88■□□□□ 0.93
COL2A1-209ENST00000546974 SLIT2O94813 1529 aa20.87■□□□□ 0.93
COL2A1-209ENST00000546974 HAP1P54257 671 aaPredicted RBP20.86■□□□□ 0.93
COL2A1-209ENST00000546974 LMOD2Q6P5Q4 547 aa20.86■□□□□ 0.93
COL2A1-209ENST00000546974 UNC5CLQ8IV45 518 aa20.86■□□□□ 0.93
COL2A1-209ENST00000546974 GJD4Q96KN9 370 aaPredicted RBP20.86■□□□□ 0.93
COL2A1-209ENST00000546974 TRPM3Q9HCF6 1732 aaPredicted RBP20.85■□□□□ 0.93
COL2A1-209ENST00000546974 CABLES1Q8TDN4 633 aa20.85■□□□□ 0.93
COL2A1-209ENST00000546974 GPRASP1Q5JY77 1395 aa20.85■□□□□ 0.93
COL2A1-209ENST00000546974 ABCA3Q99758 1704 aa20.84■□□□□ 0.93
COL2A1-209ENST00000546974 EP400Q96L91 3159 aa20.83■□□□□ 0.93
COL2A1-209ENST00000546974 ITSN1Q15811 1721 aa20.83■□□□□ 0.92
COL2A1-209ENST00000546974 ATAD2Q6PL18 1390 aa20.83■□□□□ 0.92
COL2A1-209ENST00000546974 ALS2Q96Q42 1657 aa20.82■□□□□ 0.92
COL2A1-209ENST00000546974 NBPF1Q3BBV0 1214 aa20.81■□□□□ 0.92
COL2A1-209ENST00000546974 NGDNQ8NEJ9 315 aaKnown RBP20.81■□□□□ 0.92
COL2A1-209ENST00000546974 NUDT16Q96DE0 195 aaKnown RBP20.81■□□□□ 0.92
COL2A1-209ENST00000546974 NWD2Q9ULI1 1742 aa20.81■□□□□ 0.92
COL2A1-209ENST00000546974 ATP7BP35670 1465 aa20.81■□□□□ 0.92
COL2A1-209ENST00000546974 PLEKHG5O94827 1062 aa20.8■□□□□ 0.92
COL2A1-209ENST00000546974 CDK19Q9BWU1 502 aa20.8■□□□□ 0.92
COL2A1-209ENST00000546974 RALGAPBQ86X10 1494 aa20.79■□□□□ 0.92
COL2A1-209ENST00000546974 PLCH1Q4KWH8 1693 aa20.79■□□□□ 0.92
COL2A1-209ENST00000546974 GLI3P10071 1580 aa20.78■□□□□ 0.92
COL2A1-209ENST00000546974 VPS72Q15906 364 aa20.77■□□□□ 0.92
COL2A1-209ENST00000546974 FAM83GA6ND36 823 aa20.76■□□□□ 0.91
COL2A1-209ENST00000546974 PAK3O75914 559 aaPredicted RBP20.75■□□□□ 0.91
COL2A1-209ENST00000546974 L3MBTL2Q969R5 705 aa20.75■□□□□ 0.91
COL2A1-209ENST00000546974 CCDC61Q9Y6R9 512 aa20.75■□□□□ 0.91
COL2A1-209ENST00000546974 TOPAZ1Q8N9V7 1692 aa20.73■□□□□ 0.91
COL2A1-209ENST00000546974 SIN3AQ96ST3 1273 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms