RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 RNF17Q9BXT8 1623 aaKnown RBP11.18□□□□□ -0.62
NECAP1-207ENST00000544891 CNTLNQ9NXG0 1405 aa11.17□□□□□ -0.62
NECAP1-207ENST00000544891 SPHKAPQ2M3C7 1700 aa11.17□□□□□ -0.62
NECAP1-207ENST00000544891 NEO1Q92859 1461 aa11.17□□□□□ -0.62
NECAP1-207ENST00000544891 PRKRIP1Q9H875 184 aaPredicted RBP11.17□□□□□ -0.62
NECAP1-207ENST00000544891 PRDM15P57071 1507 aaPredicted RBP11.17□□□□□ -0.62
NECAP1-207ENST00000544891 ZKSCAN2Q63HK3 967 aa11.17□□□□□ -0.62
NECAP1-207ENST00000544891 IPO9Q96P70 1041 aaKnown RBP11.17□□□□□ -0.62
NECAP1-207ENST00000544891 ATP6V1DQ9Y5K8 247 aa11.17□□□□□ -0.62
NECAP1-207ENST00000544891 USP47Q96K76 1375 aa11.17□□□□□ -0.62
NECAP1-207ENST00000544891 VWDEQ8N2E2 1590 aa11.16□□□□□ -0.62
NECAP1-207ENST00000544891 PANK3Q9H999 370 aa11.16□□□□□ -0.62
NECAP1-207ENST00000544891 TRAK1Q9UPV9 953 aa11.16□□□□□ -0.62
NECAP1-207ENST00000544891 TRPM1Q7Z4N2 1603 aa11.16□□□□□ -0.62
NECAP1-207ENST00000544891 LMTK2Q8IWU2 1503 aa11.16□□□□□ -0.62
NECAP1-207ENST00000544891 HECW2Q9P2P5 1572 aa11.16□□□□□ -0.62
NECAP1-207ENST00000544891 API5Q9BZZ5 524 aaKnown RBP11.15□□□□□ -0.62
NECAP1-207ENST00000544891 FBXO3Q9UK99 471 aa11.15□□□□□ -0.62
NECAP1-207ENST00000544891 TPRNQ4KMQ1 711 aa11.15□□□□□ -0.62
NECAP1-207ENST00000544891 ZC3H13Q5T200 1668 aaKnown RBP11.14□□□□□ -0.63
NECAP1-207ENST00000544891 TRIM6-TRIM34B2RNG4 842 aa11.14□□□□□ -0.63
NECAP1-207ENST00000544891 MAP3K4Q9Y6R4 1608 aa11.14□□□□□ -0.63
NECAP1-207ENST00000544891 APBB1O00213 710 aa11.14□□□□□ -0.63
NECAP1-207ENST00000544891 KIF16BQ96L93 1317 aa11.14□□□□□ -0.63
NECAP1-207ENST00000544891 DDX11L8A8MPP1 907 aa11.14□□□□□ -0.63
NECAP1-207ENST00000544891 WWC1Q8IX03 1113 aa11.13□□□□□ -0.63
NECAP1-207ENST00000544891 E9PCH4 1651 aa11.13□□□□□ -0.63
NECAP1-207ENST00000544891 TRAPPC8Q9Y2L5 1435 aa11.13□□□□□ -0.63
NECAP1-207ENST00000544891 C1orf141Q5JVX7 400 aa11.13□□□□□ -0.63
NECAP1-207ENST00000544891 RUFY2Q8WXA3 655 aa11.13□□□□□ -0.63
NECAP1-207ENST00000544891 ISY1Q9ULR0 285 aaKnown RBP11.13□□□□□ -0.63
NECAP1-207ENST00000544891 SKOR2Q2VWA4 1001 aaPredicted RBP11.13□□□□□ -0.63
NECAP1-207ENST00000544891 NEXNQ0ZGT2 675 aa11.13□□□□□ -0.63
NECAP1-207ENST00000544891 DDX19BQ9UMR2 479 aa11.13□□□□□ -0.63
NECAP1-207ENST00000544891 KIAA1210Q9ULL0 1709 aa11.13□□□□□ -0.63
NECAP1-207ENST00000544891 TEFQ10587 303 aa11.12□□□□□ -0.63
NECAP1-207ENST00000544891 CPLX2Q6PUV4 134 aaKnown RBP11.12□□□□□ -0.63
NECAP1-207ENST00000544891 GOLGA6L3A6NEY3 463 aa11.12□□□□□ -0.63
NECAP1-207ENST00000544891 MFAP1P55081 439 aaKnown RBP11.12□□□□□ -0.63
NECAP1-207ENST00000544891 FAM161AQ3B820 660 aa11.12□□□□□ -0.63
NECAP1-207ENST00000544891 SLC4A10Q6U841 1118 aa11.12□□□□□ -0.63
NECAP1-207ENST00000544891 POGZQ7Z3K3 1410 aa11.12□□□□□ -0.63
NECAP1-207ENST00000544891 CCDC7Q96M83 1385 aa11.11□□□□□ -0.63
NECAP1-207ENST00000544891 WASHC2AQ641Q2 1341 aa11.11□□□□□ -0.63
NECAP1-207ENST00000544891 SPATA31E1Q6ZUB1 1445 aa11.11□□□□□ -0.63
NECAP1-207ENST00000544891 DEKP35659 375 aaKnown RBP11.11□□□□□ -0.63
NECAP1-207ENST00000544891 REC8O95072 547 aa11.11□□□□□ -0.63
NECAP1-207ENST00000544891 DHX29Q7Z478 1369 aaKnown RBP11.11□□□□□ -0.63
NECAP1-207ENST00000544891 CHMP3Q9Y3E7 222 aa11.1□□□□□ -0.63
NECAP1-207ENST00000544891 MLH3Q9UHC1 1453 aa11.1□□□□□ -0.63
NECAP1-207ENST00000544891 DIAPH1O60610 1272 aaKnown RBP11.1□□□□□ -0.63
NECAP1-207ENST00000544891 DDX58O95786 925 aaKnown RBP11.1□□□□□ -0.63
NECAP1-207ENST00000544891 HSP90AB4PQ58FF6 505 aa11.1□□□□□ -0.63
NECAP1-207ENST00000544891 SCAPERQ9BY12 1400 aa11.1□□□□□ -0.63
NECAP1-207ENST00000544891 ZNF330Q9Y3S2 320 aaPredicted RBP11.1□□□□□ -0.63
NECAP1-207ENST00000544891 GTF2E1P29083 439 aaPredicted RBP11.09□□□□□ -0.63
NECAP1-207ENST00000544891 PTPRTO14522 1441 aa11.09□□□□□ -0.63
NECAP1-207ENST00000544891 CD109Q6YHK3 1445 aa11.09□□□□□ -0.63
NECAP1-207ENST00000544891 HSP90B1P14625 803 aaKnown RBP11.09□□□□□ -0.63
NECAP1-207ENST00000544891 TAOK2Q9UL54 1235 aa11.09□□□□□ -0.63
NECAP1-207ENST00000544891 CLUAP1Q96AJ1 413 aa11.09□□□□□ -0.63
NECAP1-207ENST00000544891 RRP1P56182 461 aaKnown RBP11.09□□□□□ -0.63
NECAP1-207ENST00000544891 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.09□□□□□ -0.63
NECAP1-207ENST00000544891 PRAG1Q86YV5 1406 aa11.09□□□□□ -0.63
NECAP1-207ENST00000544891 KIDINS220Q9ULH0 1771 aa11.08□□□□□ -0.64
NECAP1-207ENST00000544891 CCDC146Q8IYE0 955 aa11.08□□□□□ -0.64
NECAP1-207ENST00000544891 SLKQ9H2G2 1235 aaPredicted RBP11.08□□□□□ -0.64
NECAP1-207ENST00000544891 GNAI1P63096 354 aa11.08□□□□□ -0.64
NECAP1-207ENST00000544891 RUNDC1Q96C34 613 aa11.07□□□□□ -0.64
NECAP1-207ENST00000544891 CCDC9Q9Y3X0 531 aaKnown RBP11.07□□□□□ -0.64
NECAP1-207ENST00000544891 KIF1BO60333 1816 aa11.07□□□□□ -0.64
NECAP1-207ENST00000544891 G3V3G9 751 aa11.07□□□□□ -0.64
NECAP1-207ENST00000544891 DCAF8Q5TAQ9 597 aa11.07□□□□□ -0.64
NECAP1-207ENST00000544891 EFCAB6Q5THR3 1501 aa11.07□□□□□ -0.64
NECAP1-207ENST00000544891 SF3A1Q15459 793 aaKnown RBP11.07□□□□□ -0.64
NECAP1-207ENST00000544891 TTC5Q8N0Z6 440 aa11.07□□□□□ -0.64
NECAP1-207ENST00000544891 ANO8Q9HCE9 1232 aaPredicted RBP11.07□□□□□ -0.64
NECAP1-207ENST00000544891 MADDQ8WXG6 1647 aa11.06□□□□□ -0.64
NECAP1-207ENST00000544891 GPRASP1Q5JY77 1395 aa11.06□□□□□ -0.64
NECAP1-207ENST00000544891 ZKSCAN1P17029 563 aaPredicted RBP11.06□□□□□ -0.64
NECAP1-207ENST00000544891 SPRYD3Q8NCJ5 442 aa11.06□□□□□ -0.64
NECAP1-207ENST00000544891 A2MP01023 1474 aa11.06□□□□□ -0.64
NECAP1-207ENST00000544891 MROH1Q8NDA8 1641 aa11.06□□□□□ -0.64
NECAP1-207ENST00000544891 SYNE3Q6ZMZ3 975 aa11.06□□□□□ -0.64
NECAP1-207ENST00000544891 MYOM2P54296 1465 aa11.06□□□□□ -0.64
NECAP1-207ENST00000544891 RIMBP3CA6NJZ7 1639 aa11.05□□□□□ -0.64
NECAP1-207ENST00000544891 RIMBP3BA6NNM3 1639 aa11.05□□□□□ -0.64
NECAP1-207ENST00000544891 RIMBP3Q9UFD9 1639 aa11.05□□□□□ -0.64
NECAP1-207ENST00000544891 CLTCL1P53675 1640 aa11.05□□□□□ -0.64
NECAP1-207ENST00000544891 FRAT2O75474 233 aaPredicted RBP11.05□□□□□ -0.64
NECAP1-207ENST00000544891 RNF20Q5VTR2 975 aa11.05□□□□□ -0.64
NECAP1-207ENST00000544891 BRD4O60885 1362 aaPredicted RBP11.05□□□□□ -0.64
NECAP1-207ENST00000544891 CLSTN1O94985 981 aa11.04□□□□□ -0.64
NECAP1-207ENST00000544891 RASSF8Q8NHQ8 419 aa11.04□□□□□ -0.64
NECAP1-207ENST00000544891 DIAPH3Q9NSV4 1193 aa11.04□□□□□ -0.64
NECAP1-207ENST00000544891 ZMYM4Q5VZL5 1548 aa11.04□□□□□ -0.64
NECAP1-207ENST00000544891 TPM3P06753 285 aa11.04□□□□□ -0.64
NECAP1-207ENST00000544891 AKAP17AQ02040 695 aaKnown RBP11.04□□□□□ -0.64
NECAP1-207ENST00000544891 NBPF8Q3BBV2 869 aa11.04□□□□□ -0.64
NECAP1-207ENST00000544891 DZIP1LQ8IYY4 767 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms