RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 FOXD1Q16676 465 aa17.86■□□□□ 0.45
GABPB1-206ENST00000543881 ZRANB1Q9UGI0 708 aa17.86■□□□□ 0.45
GABPB1-206ENST00000543881 PRAG1Q86YV5 1406 aa17.84■□□□□ 0.45
GABPB1-206ENST00000543881 MYOM2P54296 1465 aa17.83■□□□□ 0.44
GABPB1-206ENST00000543881 SLC4A1APQ9BWU0 796 aaKnown RBP17.82■□□□□ 0.44
GABPB1-206ENST00000543881 NPHP3Q7Z494 1330 aa17.82■□□□□ 0.44
GABPB1-206ENST00000543881 EP400Q96L91 3159 aa17.81■□□□□ 0.44
GABPB1-206ENST00000543881 ESCO1Q5FWF5 840 aa17.81■□□□□ 0.44
GABPB1-206ENST00000543881 CCDC125Q86Z20 511 aa17.81■□□□□ 0.44
GABPB1-206ENST00000543881 BCL9LQ86UU0 1499 aa17.81■□□□□ 0.44
GABPB1-206ENST00000543881 MARF1Q9Y4F3 1742 aaKnown RBP17.8■□□□□ 0.44
GABPB1-206ENST00000543881 RPGRIP1LQ68CZ1 1315 aa17.79■□□□□ 0.44
GABPB1-206ENST00000543881 PXDNQ92626 1479 aa17.79■□□□□ 0.44
GABPB1-206ENST00000543881 FOXO3O43524 673 aa17.78■□□□□ 0.44
GABPB1-206ENST00000543881 XPCQ01831 940 aaPredicted RBP17.78■□□□□ 0.44
GABPB1-206ENST00000543881 CDC42BPGQ6DT37 1551 aa17.78■□□□□ 0.44
GABPB1-206ENST00000543881 GJD4Q96KN9 370 aaPredicted RBP17.78■□□□□ 0.44
GABPB1-206ENST00000543881 PPLO60437 1756 aa17.77■□□□□ 0.44
GABPB1-206ENST00000543881 LRPPRCP42704 1394 aaKnown RBP17.74■□□□□ 0.43
GABPB1-206ENST00000543881 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.74■□□□□ 0.43
GABPB1-206ENST00000543881 NUTM2FA1L443 756 aa17.73■□□□□ 0.43
GABPB1-206ENST00000543881 MPHOSPH9Q99550 1183 aa17.72■□□□□ 0.43
GABPB1-206ENST00000543881 WAPLQ7Z5K2 1190 aa17.71■□□□□ 0.43
GABPB1-206ENST00000543881 UNC5CLQ8IV45 518 aa17.71■□□□□ 0.43
GABPB1-206ENST00000543881 RALGAPBQ86X10 1494 aa17.71■□□□□ 0.43
GABPB1-206ENST00000543881 GLI3P10071 1580 aa17.7■□□□□ 0.42
GABPB1-206ENST00000543881 BLMP54132 1417 aaPredicted RBP17.7■□□□□ 0.42
GABPB1-206ENST00000543881 STK26Q9P289 416 aa17.7■□□□□ 0.42
GABPB1-206ENST00000543881 SLIT2O94813 1529 aa17.7■□□□□ 0.42
GABPB1-206ENST00000543881 SPATA31A3Q5VYP0 1347 aa17.68■□□□□ 0.42
GABPB1-206ENST00000543881 ADGRF5Q8IZF2 1346 aa17.68■□□□□ 0.42
GABPB1-206ENST00000543881 TECPR2O15040 1411 aa17.68■□□□□ 0.42
GABPB1-206ENST00000543881 BRWD3Q6RI45 1802 aa17.68■□□□□ 0.42
GABPB1-206ENST00000543881 CCDC144AA2RUR9 1427 aa17.67■□□□□ 0.42
GABPB1-206ENST00000543881 SPATA31E1Q6ZUB1 1445 aa17.67■□□□□ 0.42
GABPB1-206ENST00000543881 DEFB132Q7Z7B7 95 aa17.67■□□□□ 0.42
GABPB1-206ENST00000543881 PLEKHH1Q9ULM0 1364 aa17.66■□□□□ 0.42
GABPB1-206ENST00000543881 USP32Q8NFA0 1604 aa17.65■□□□□ 0.42
GABPB1-206ENST00000543881 KIF1AQ12756 1690 aa17.65■□□□□ 0.42
GABPB1-206ENST00000543881 FMN2Q9NZ56 1722 aa17.65■□□□□ 0.42
GABPB1-206ENST00000543881 RGL3Q3MIN7 710 aa17.65■□□□□ 0.42
GABPB1-206ENST00000543881 KRT28Q7Z3Y7 464 aa17.65■□□□□ 0.42
GABPB1-206ENST00000543881 ABCC11Q96J66 1382 aa17.65■□□□□ 0.42
GABPB1-206ENST00000543881 SF3B2Q13435 895 aaKnown RBP17.64■□□□□ 0.41
GABPB1-206ENST00000543881 TMEM132EQ6IEE7 984 aa17.64■□□□□ 0.41
GABPB1-206ENST00000543881 SEPT12Q8IYM1 358 aa17.64■□□□□ 0.41
GABPB1-206ENST00000543881 KNDC1Q76NI1 1749 aa17.64■□□□□ 0.41
GABPB1-206ENST00000543881 HAP1P54257 671 aaPredicted RBP17.63■□□□□ 0.41
GABPB1-206ENST00000543881 ANKRD30BQ9BXX2 1392 aa17.62■□□□□ 0.41
GABPB1-206ENST00000543881 VPS72Q15906 364 aa17.62■□□□□ 0.41
GABPB1-206ENST00000543881 IFT172Q9UG01 1749 aa17.61■□□□□ 0.41
GABPB1-206ENST00000543881 RAB3GAP2Q9H2M9 1393 aa17.6■□□□□ 0.41
GABPB1-206ENST00000543881 PLEKHG5O94827 1062 aa17.6■□□□□ 0.41
GABPB1-206ENST00000543881 PSME1Q06323 249 aa17.6■□□□□ 0.41
GABPB1-206ENST00000543881 CABLES1Q8TDN4 633 aa17.6■□□□□ 0.41
GABPB1-206ENST00000543881 CCDC9Q9Y3X0 531 aaKnown RBP17.6■□□□□ 0.41
GABPB1-206ENST00000543881 RGPD8O14715 1765 aaPredicted RBP17.6■□□□□ 0.41
GABPB1-206ENST00000543881 TNS3Q68CZ2 1445 aa17.6■□□□□ 0.41
GABPB1-206ENST00000543881 PLCH1Q4KWH8 1693 aa17.59■□□□□ 0.41
GABPB1-206ENST00000543881 ONECUT3O60422 494 aaPredicted RBP17.59■□□□□ 0.41
GABPB1-206ENST00000543881 KRT27Q7Z3Y8 459 aa17.59■□□□□ 0.41
GABPB1-206ENST00000543881 NWD2Q9ULI1 1742 aa17.59■□□□□ 0.41
GABPB1-206ENST00000543881 PIK3C2GO75747 1445 aa17.59■□□□□ 0.41
GABPB1-206ENST00000543881 YTHDC2Q9H6S0 1430 aaKnown RBP17.59■□□□□ 0.41
GABPB1-206ENST00000543881 PHF8Q9UPP1 1060 aa17.58■□□□□ 0.41
GABPB1-206ENST00000543881 LRP5O75197 1615 aa17.58■□□□□ 0.4
GABPB1-206ENST00000543881 ACIN1Q9UKV3 1341 aaKnown RBP17.58■□□□□ 0.4
GABPB1-206ENST00000543881 LMOD2Q6P5Q4 547 aa17.56■□□□□ 0.4
GABPB1-206ENST00000543881 ABCA3Q99758 1704 aa17.56■□□□□ 0.4
GABPB1-206ENST00000543881 SIRT1Q96EB6 747 aa17.56■□□□□ 0.4
GABPB1-206ENST00000543881 SBNO1A3KN83 1393 aa17.55■□□□□ 0.4
GABPB1-206ENST00000543881 ARHGEF10O15013 1369 aa17.55■□□□□ 0.4
GABPB1-206ENST00000543881 A0A0G2JS52 829 aa17.54■□□□□ 0.4
GABPB1-206ENST00000543881 FAM83GA6ND36 823 aa17.54■□□□□ 0.4
GABPB1-206ENST00000543881 MYT1Q01538 1121 aa17.54■□□□□ 0.4
GABPB1-206ENST00000543881 NRXN1Q9ULB1 1477 aa17.54■□□□□ 0.4
GABPB1-206ENST00000543881 PSDA5PKW4 1024 aaPredicted RBP17.53■□□□□ 0.4
GABPB1-206ENST00000543881 BAG6P46379 1132 aa17.53■□□□□ 0.4
GABPB1-206ENST00000543881 C14orf93Q9H972 538 aaKnown RBP17.51■□□□□ 0.39
GABPB1-206ENST00000543881 DHX57Q6P158 1386 aaKnown RBP17.51■□□□□ 0.39
GABPB1-206ENST00000543881 HRCP23327 699 aa17.5■□□□□ 0.39
GABPB1-206ENST00000543881 SAFB2Q14151 953 aaKnown RBP eCLIP17.5■□□□□ 0.39
GABPB1-206ENST00000543881 FAM98CQ17RN3 349 aaKnown RBP17.5■□□□□ 0.39
GABPB1-206ENST00000543881 CFAP70Q5T0N1 1121 aa17.5■□□□□ 0.39
GABPB1-206ENST00000543881 PMFBP1Q8TBY8 1022 aa17.5■□□□□ 0.39
GABPB1-206ENST00000543881 PRAM1Q96QH2 718 aa17.5■□□□□ 0.39
GABPB1-206ENST00000543881 NRAPQ86VF7 1730 aa17.49■□□□□ 0.39
GABPB1-206ENST00000543881 BTG4Q9NY30 223 aa17.49■□□□□ 0.39
GABPB1-206ENST00000543881 ANKARQ7Z5J8 1434 aa17.46■□□□□ 0.39
GABPB1-206ENST00000543881 EN1Q05925 392 aaPredicted RBP17.46■□□□□ 0.39
GABPB1-206ENST00000543881 RGPD1P0DJD0 1748 aa17.46■□□□□ 0.38
GABPB1-206ENST00000543881 TRPM3Q9HCF6 1732 aaPredicted RBP17.46■□□□□ 0.38
GABPB1-206ENST00000543881 COL14A1Q05707 1796 aaKnown RBP17.45■□□□□ 0.38
GABPB1-206ENST00000543881 FAM182BQ5T319 152 aa17.45■□□□□ 0.38
GABPB1-206ENST00000543881 POGKQ9P215 609 aa17.45■□□□□ 0.38
GABPB1-206ENST00000543881 ALS2Q96Q42 1657 aa17.44■□□□□ 0.38
GABPB1-206ENST00000543881 DLC1Q96QB1 1528 aa17.43■□□□□ 0.38
GABPB1-206ENST00000543881 R3HDM1Q15032 1099 aaKnown RBP17.43■□□□□ 0.38
GABPB1-206ENST00000543881 SPATA31A5Q5VU36 1347 aa17.43■□□□□ 0.38
GABPB1-206ENST00000543881 SPATA31A7Q8IWB4 1347 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms