RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 NBPF1Q3BBV0 1214 aa15.86■□□□□ 0.13
DDB1-222ENST00000543627 NALCNQ8IZF0 1738 aa15.85■□□□□ 0.13
DDB1-222ENST00000543627 MINK1Q8N4C8 1332 aaPredicted RBP15.85■□□□□ 0.13
DDB1-222ENST00000543627 TONSLQ96HA7 1378 aa15.85■□□□□ 0.13
DDB1-222ENST00000543627 MST1RQ04912 1400 aa15.85■□□□□ 0.13
DDB1-222ENST00000543627 LAMC1P11047 1609 aa15.84■□□□□ 0.13
DDB1-222ENST00000543627 DCCP43146 1447 aa15.84■□□□□ 0.13
DDB1-222ENST00000543627 SIRT1Q96EB6 747 aa15.83■□□□□ 0.12
DDB1-222ENST00000543627 PHF23Q9BUL5 403 aaPredicted RBP15.83■□□□□ 0.12
DDB1-222ENST00000543627 TECPR2O15040 1411 aa15.82■□□□□ 0.12
DDB1-222ENST00000543627 PHLPP1O60346 1717 aa15.82■□□□□ 0.12
DDB1-222ENST00000543627 C1orf167Q5SNV9 1468 aa15.81■□□□□ 0.12
DDB1-222ENST00000543627 PRAG1Q86YV5 1406 aa15.81■□□□□ 0.12
DDB1-222ENST00000543627 NUTM2BA6NNL0 878 aaPredicted RBP15.8■□□□□ 0.12
DDB1-222ENST00000543627 NUTM2EB1AL46 878 aaPredicted RBP15.8■□□□□ 0.12
DDB1-222ENST00000543627 XPCQ01831 940 aaPredicted RBP15.8■□□□□ 0.12
DDB1-222ENST00000543627 NUTM2AQ8IVF1 878 aaPredicted RBP15.8■□□□□ 0.12
DDB1-222ENST00000543627 FOXO3O43524 673 aa15.79■□□□□ 0.12
DDB1-222ENST00000543627 CCER1Q8TC90 406 aaPredicted RBP15.79■□□□□ 0.12
DDB1-222ENST00000543627 KNDC1Q76NI1 1749 aa15.79■□□□□ 0.12
DDB1-222ENST00000543627 ADGRB1O14514 1584 aa15.79■□□□□ 0.12
DDB1-222ENST00000543627 PLEKHG5O94827 1062 aa15.78■□□□□ 0.12
DDB1-222ENST00000543627 NBPF8Q3BBV2 869 aa15.77■□□□□ 0.12
DDB1-222ENST00000543627 MEX3CQ5U5Q3 659 aaKnown RBP15.77■□□□□ 0.12
DDB1-222ENST00000543627 PMFBP1Q8TBY8 1022 aa15.77■□□□□ 0.12
DDB1-222ENST00000543627 LRRC59Q96AG4 307 aaKnown RBP15.77■□□□□ 0.12
DDB1-222ENST00000543627 ROCK2O75116 1388 aaKnown RBP15.76■□□□□ 0.11
DDB1-222ENST00000543627 JCADQ9P266 1359 aa15.76■□□□□ 0.11
DDB1-222ENST00000543627 DLC1Q96QB1 1528 aa15.74■□□□□ 0.11
DDB1-222ENST00000543627 WASLO00401 505 aaPredicted RBP15.74■□□□□ 0.11
DDB1-222ENST00000543627 PHF8Q9UPP1 1060 aa15.74■□□□□ 0.11
DDB1-222ENST00000543627 CDC42BPGQ6DT37 1551 aa15.74■□□□□ 0.11
DDB1-222ENST00000543627 LMOD2Q6P5Q4 547 aa15.73■□□□□ 0.11
DDB1-222ENST00000543627 CDK19Q9BWU1 502 aa15.73■□□□□ 0.11
DDB1-222ENST00000543627 MED1Q15648 1581 aaPredicted RBP15.73■□□□□ 0.11
DDB1-222ENST00000543627 NPHP3Q7Z494 1330 aa15.72■□□□□ 0.11
DDB1-222ENST00000543627 CENPJQ9HC77 1338 aaPredicted RBP15.72■□□□□ 0.11
DDB1-222ENST00000543627 PSME1Q06323 249 aa15.72■□□□□ 0.11
DDB1-222ENST00000543627 KRT28Q7Z3Y7 464 aa15.72■□□□□ 0.11
DDB1-222ENST00000543627 CARD11Q9BXL7 1154 aa15.72■□□□□ 0.11
DDB1-222ENST00000543627 COL16A1Q07092 1604 aaPredicted RBP15.72■□□□□ 0.11
DDB1-222ENST00000543627 AHDC1Q5TGY3 1603 aaPredicted RBP15.72■□□□□ 0.11
DDB1-222ENST00000543627 SRPK2P78362 688 aaKnown RBP15.71■□□□□ 0.11
DDB1-222ENST00000543627 NGDNQ8NEJ9 315 aaKnown RBP15.7■□□□□ 0.1
DDB1-222ENST00000543627 KIAA1210Q9ULL0 1709 aa15.7■□□□□ 0.1
DDB1-222ENST00000543627 FMN2Q9NZ56 1722 aa15.69■□□□□ 0.1
DDB1-222ENST00000543627 ADAMTS2O95450 1211 aa15.69■□□□□ 0.1
DDB1-222ENST00000543627 NUDT16Q96DE0 195 aaKnown RBP15.69■□□□□ 0.1
DDB1-222ENST00000543627 SOS2Q07890 1332 aaPredicted RBP15.68■□□□□ 0.1
DDB1-222ENST00000543627 SPATA31A6Q5VVP1 1343 aa15.68■□□□□ 0.1
DDB1-222ENST00000543627 RGPD8O14715 1765 aaPredicted RBP15.68■□□□□ 0.1
DDB1-222ENST00000543627 CABP2Q9NPB3 220 aa15.68■□□□□ 0.1
DDB1-222ENST00000543627 ARHGEF28Q8N1W1 1705 aaKnown RBP15.68■□□□□ 0.1
DDB1-222ENST00000543627 PRR36Q9H6K5 1346 aa15.68■□□□□ 0.1
DDB1-222ENST00000543627 PAK3O75914 559 aaPredicted RBP15.67■□□□□ 0.1
DDB1-222ENST00000543627 HAP1P54257 671 aaPredicted RBP15.67■□□□□ 0.1
DDB1-222ENST00000543627 NHSL1Q5SYE7 1610 aa15.67■□□□□ 0.1
DDB1-222ENST00000543627 EIF3AQ14152 1382 aaKnown RBP15.66■□□□□ 0.1
DDB1-222ENST00000543627 TRPM1Q7Z4N2 1603 aa15.66■□□□□ 0.1
DDB1-222ENST00000543627 C8orf37Q96NL8 207 aa15.65■□□□□ 0.1
DDB1-222ENST00000543627 PNPLA6Q8IY17 1366 aa15.64■□□□□ 0.09
DDB1-222ENST00000543627 ANKARQ7Z5J8 1434 aa15.63■□□□□ 0.09
DDB1-222ENST00000543627 GPRASP1Q5JY77 1395 aa15.62■□□□□ 0.09
DDB1-222ENST00000543627 NGLY1Q96IV0 654 aa15.62■□□□□ 0.09
DDB1-222ENST00000543627 RGS17Q9UGC6 210 aaPredicted RBP15.62■□□□□ 0.09
DDB1-222ENST00000543627 CCDC61Q9Y6R9 512 aa15.62■□□□□ 0.09
DDB1-222ENST00000543627 TULP4Q9NRJ4 1543 aa15.62■□□□□ 0.09
DDB1-222ENST00000543627 EVC2Q86UK5 1308 aa15.62■□□□□ 0.09
DDB1-222ENST00000543627 CLSPNQ9HAW4 1339 aa15.62■□□□□ 0.09
DDB1-222ENST00000543627 ADGRB2O60241 1585 aa15.62■□□□□ 0.09
DDB1-222ENST00000543627 LRP6O75581 1613 aa15.61■□□□□ 0.09
DDB1-222ENST00000543627 CABLES1Q8TDN4 633 aa15.61■□□□□ 0.09
DDB1-222ENST00000543627 SPATA31A3Q5VYP0 1347 aa15.61■□□□□ 0.09
DDB1-222ENST00000543627 SHPRHQ149N8 1683 aa15.6■□□□□ 0.09
DDB1-222ENST00000543627 PXDNQ92626 1479 aa15.6■□□□□ 0.09
DDB1-222ENST00000543627 POTEAQ6S8J7 498 aa15.6■□□□□ 0.09
DDB1-222ENST00000543627 USP32Q8NFA0 1604 aa15.6■□□□□ 0.09
DDB1-222ENST00000543627 KIF1AQ12756 1690 aa15.6■□□□□ 0.09
DDB1-222ENST00000543627 QRICH2Q9H0J4 1663 aa15.6■□□□□ 0.09
DDB1-222ENST00000543627 NUTM2GQ5VZR2 741 aa15.59■□□□□ 0.09
DDB1-222ENST00000543627 CABP1Q9NZU7 370 aa15.59■□□□□ 0.09
DDB1-222ENST00000543627 ACEP12821 1306 aa15.59■□□□□ 0.09
DDB1-222ENST00000543627 AFF2P51816 1311 aa15.59■□□□□ 0.09
DDB1-222ENST00000543627 RALGAPBQ86X10 1494 aa15.58■□□□□ 0.08
DDB1-222ENST00000543627 ST20-MTHFSA0A0A6YYL1 179 aa15.57■□□□□ 0.08
DDB1-222ENST00000543627 ZNF772Q68DY9 489 aaPredicted RBP15.57■□□□□ 0.08
DDB1-222ENST00000543627 TMC1Q8TDI8 760 aa15.57■□□□□ 0.08
DDB1-222ENST00000543627 TIMELESSQ9UNS1 1208 aa15.57■□□□□ 0.08
DDB1-222ENST00000543627 PPIP5K1Q6PFW1 1433 aa15.57■□□□□ 0.08
DDB1-222ENST00000543627 ATP7BP35670 1465 aa15.56■□□□□ 0.08
DDB1-222ENST00000543627 TNS3Q68CZ2 1445 aa15.55■□□□□ 0.08
DDB1-222ENST00000543627 SBNO1A3KN83 1393 aa15.54■□□□□ 0.08
DDB1-222ENST00000543627 PLEKHG3A1L390 1219 aa15.54■□□□□ 0.08
DDB1-222ENST00000543627 USP21Q9UK80 565 aa15.54■□□□□ 0.08
DDB1-222ENST00000543627 ABTB2Q8N961 1025 aa15.53■□□□□ 0.08
DDB1-222ENST00000543627 QTRT2Q9H974 415 aaKnown RBP15.53■□□□□ 0.08
DDB1-222ENST00000543627 ARHGEF10O15013 1369 aa15.52■□□□□ 0.08
DDB1-222ENST00000543627 ITSN1Q15811 1721 aa15.52■□□□□ 0.08
DDB1-222ENST00000543627 ZBTB7CA1YPR0 619 aa15.51■□□□□ 0.07
DDB1-222ENST00000543627 RXRBP28702 533 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms