RNA–Protein interactions for RNA: ENST00000542896.5

PDCD2-209, Transcript of programmed cell death 2, humanhuman

TSL 2 BASIC

Gene PDCD2, Length 1,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-209ENST00000542896 STK26Q9P289 416 aa38.71■■■■□ 3.79
PDCD2-209ENST00000542896 ANKRD30BQ9BXX2 1392 aa38.7■■■■□ 3.79
PDCD2-209ENST00000542896 RBM6P78332 1123 aaKnown RBP38.7■■■■□ 3.79
PDCD2-209ENST00000542896 SPATA31E1Q6ZUB1 1445 aa38.7■■■■□ 3.79
PDCD2-209ENST00000542896 ESCO1Q5FWF5 840 aa38.69■■■■□ 3.78
PDCD2-209ENST00000542896 CDC42BPGQ6DT37 1551 aa38.65■■■■□ 3.78
PDCD2-209ENST00000542896 NPHP3Q7Z494 1330 aa38.64■■■■□ 3.78
PDCD2-209ENST00000542896 WAPLQ7Z5K2 1190 aa38.64■■■■□ 3.78
PDCD2-209ENST00000542896 LRPPRCP42704 1394 aaKnown RBP38.64■■■■□ 3.78
PDCD2-209ENST00000542896 RGS12O14924 1447 aa38.62■■■■□ 3.77
PDCD2-209ENST00000542896 TECPR2O15040 1411 aa38.62■■■■□ 3.77
PDCD2-209ENST00000542896 TMEM132EQ6IEE7 984 aa38.61■■■■□ 3.77
PDCD2-209ENST00000542896 ABCC11Q96J66 1382 aa38.59■■■■□ 3.77
PDCD2-209ENST00000542896 USP21Q9UK80 565 aa38.59■■■■□ 3.77
PDCD2-209ENST00000542896 NUTM2FA1L443 756 aa38.58■■■■□ 3.77
PDCD2-209ENST00000542896 PIK3C2GO75747 1445 aa38.57■■■■□ 3.77
PDCD2-209ENST00000542896 FOXO3O43524 673 aa38.57■■■■□ 3.76
PDCD2-209ENST00000542896 ACIN1Q9UKV3 1341 aaKnown RBP38.56■■■■□ 3.76
PDCD2-209ENST00000542896 XPCQ01831 940 aaPredicted RBP38.55■■■■□ 3.76
PDCD2-209ENST00000542896 PLEKHH1Q9ULM0 1364 aa38.55■■■■□ 3.76
PDCD2-209ENST00000542896 IFT172Q9UG01 1749 aa38.55■■■■□ 3.76
PDCD2-209ENST00000542896 TRPC5Q9UL62 973 aaPredicted RBP38.53■■■■□ 3.76
PDCD2-209ENST00000542896 FNBP4Q8N3X1 1017 aaPredicted RBP38.52■■■■□ 3.76
PDCD2-209ENST00000542896 PXDNQ92626 1479 aa38.52■■■■□ 3.76
PDCD2-209ENST00000542896 YTHDC2Q9H6S0 1430 aaKnown RBP38.51■■■■□ 3.76
PDCD2-209ENST00000542896 COL22A1Q8NFW1 1626 aaPredicted RBP38.51■■■■□ 3.76
PDCD2-209ENST00000542896 MYOM2P54296 1465 aa38.48■■■■□ 3.75
PDCD2-209ENST00000542896 KNDC1Q76NI1 1749 aa38.47■■■■□ 3.75
PDCD2-209ENST00000542896 C14orf93Q9H972 538 aaKnown RBP38.46■■■■□ 3.75
PDCD2-209ENST00000542896 SIRT1Q96EB6 747 aa38.44■■■■□ 3.74
PDCD2-209ENST00000542896 ATRNO75882 1429 aa38.41■■■■□ 3.74
PDCD2-209ENST00000542896 CFAP70Q5T0N1 1121 aa38.41■■■■□ 3.74
PDCD2-209ENST00000542896 DHX57Q6P158 1386 aaKnown RBP38.4■■■■□ 3.74
PDCD2-209ENST00000542896 ATAD2Q6PL18 1390 aa38.38■■■■□ 3.73
PDCD2-209ENST00000542896 NRXN1Q9ULB1 1477 aa38.37■■■■□ 3.73
PDCD2-209ENST00000542896 FMN2Q9NZ56 1722 aa38.37■■■■□ 3.73
PDCD2-209ENST00000542896 SPATA31A3Q5VYP0 1347 aa38.36■■■■□ 3.73
PDCD2-209ENST00000542896 KRT28Q7Z3Y7 464 aa38.35■■■■□ 3.73
PDCD2-209ENST00000542896 BCL9LQ86UU0 1499 aa38.34■■■■□ 3.73
PDCD2-209ENST00000542896 RAB3GAP2Q9H2M9 1393 aa38.32■■■■□ 3.73
PDCD2-209ENST00000542896 KIF1AQ12756 1690 aa38.32■■■■□ 3.72
PDCD2-209ENST00000542896 SAFB2Q14151 953 aaKnown RBP eCLIP38.31■■■■□ 3.72
PDCD2-209ENST00000542896 PRAM1Q96QH2 718 aa38.31■■■■□ 3.72
PDCD2-209ENST00000542896 PHF8Q9UPP1 1060 aa38.31■■■■□ 3.72
PDCD2-209ENST00000542896 PSME1Q06323 249 aa38.27■■■■□ 3.72
PDCD2-209ENST00000542896 GJD4Q96KN9 370 aaPredicted RBP38.27■■■■□ 3.72
PDCD2-209ENST00000542896 POGKQ9P215 609 aa38.26■■■■□ 3.72
PDCD2-209ENST00000542896 MARF1Q9Y4F3 1742 aaKnown RBP38.25■■■■□ 3.71
PDCD2-209ENST00000542896 HAP1P54257 671 aaPredicted RBP38.24■■■■□ 3.71
PDCD2-209ENST00000542896 UNC5CLQ8IV45 518 aa38.22■■■■□ 3.71
PDCD2-209ENST00000542896 TNS3Q68CZ2 1445 aa38.21■■■■□ 3.71
PDCD2-209ENST00000542896 DLC1Q96QB1 1528 aa38.19■■■■□ 3.7
PDCD2-209ENST00000542896 SLIT2O94813 1529 aa38.18■■■■□ 3.7
PDCD2-209ENST00000542896 PLEKHG5O94827 1062 aa38.17■■■■□ 3.7
PDCD2-209ENST00000542896 LMOD2Q6P5Q4 547 aa38.17■■■■□ 3.7
PDCD2-209ENST00000542896 SBNO1A3KN83 1393 aa38.16■■■■□ 3.7
PDCD2-209ENST00000542896 CABLES1Q8TDN4 633 aa38.15■■■■□ 3.7
PDCD2-209ENST00000542896 TRAK1Q9UPV9 953 aa38.15■■■■□ 3.7
PDCD2-209ENST00000542896 KDM2AQ9Y2K7 1162 aa38.15■■■■□ 3.7
PDCD2-209ENST00000542896 USP32Q8NFA0 1604 aa38.14■■■■□ 3.7
PDCD2-209ENST00000542896 PMFBP1Q8TBY8 1022 aa38.14■■■■□ 3.7
PDCD2-209ENST00000542896 ANKARQ7Z5J8 1434 aa38.13■■■■□ 3.7
PDCD2-209ENST00000542896 RGPD8O14715 1765 aaPredicted RBP38.13■■■■□ 3.69
PDCD2-209ENST00000542896 RALGAPBQ86X10 1494 aa38.12■■■■□ 3.69
PDCD2-209ENST00000542896 DCAF11Q8TEB1 546 aa38.12■■■■□ 3.69
PDCD2-209ENST00000542896 TNKS1BP1Q9C0C2 1729 aaKnown RBP38.12■■■■□ 3.69
PDCD2-209ENST00000542896 ADGRB1O14514 1584 aa38.11■■■■□ 3.69
PDCD2-209ENST00000542896 ARHGEF10O15013 1369 aa38.11■■■■□ 3.69
PDCD2-209ENST00000542896 CCDC125Q86Z20 511 aa38.1■■■■□ 3.69
PDCD2-209ENST00000542896 HIRIP3Q9BW71 556 aaPredicted RBP38.1■■■■□ 3.69
PDCD2-209ENST00000542896 MINK1Q8N4C8 1332 aaPredicted RBP38.07■■■■□ 3.68
PDCD2-209ENST00000542896 ADGRB2O60241 1585 aa38.06■■■■□ 3.68
PDCD2-209ENST00000542896 GLI3P10071 1580 aa38.06■■■■□ 3.68
PDCD2-209ENST00000542896 STAC3Q96MF2 364 aa38.04■■■■□ 3.68
PDCD2-209ENST00000542896 EIF3AQ14152 1382 aaKnown RBP38.04■■■■□ 3.68
PDCD2-209ENST00000542896 VPS72Q15906 364 aa38.03■■■■□ 3.68
PDCD2-209ENST00000542896 CCDC9Q9Y3X0 531 aaKnown RBP38.03■■■■□ 3.68
PDCD2-209ENST00000542896 ZRANB1Q9UGI0 708 aa38.02■■■■□ 3.68
PDCD2-209ENST00000542896 GPRASP1Q5JY77 1395 aa38■■■■□ 3.67
PDCD2-209ENST00000542896 HRCP23327 699 aa37.99■■■■□ 3.67
PDCD2-209ENST00000542896 PRR36Q9H6K5 1346 aa37.98■■■■□ 3.67
PDCD2-209ENST00000542896 WASLO00401 505 aaPredicted RBP37.98■■■■□ 3.67
PDCD2-209ENST00000542896 SEPT12Q8IYM1 358 aa37.98■■■■□ 3.67
PDCD2-209ENST00000542896 FAM83GA6ND36 823 aa37.95■■■■□ 3.67
PDCD2-209ENST00000542896 TULP4Q9NRJ4 1543 aa37.95■■■■□ 3.67
PDCD2-209ENST00000542896 ABCA3Q99758 1704 aa37.93■■■■□ 3.66
PDCD2-209ENST00000542896 PLCH1Q4KWH8 1693 aa37.93■■■■□ 3.66
PDCD2-209ENST00000542896 BLMP54132 1417 aaPredicted RBP37.93■■■■□ 3.66
PDCD2-209ENST00000542896 NGDNQ8NEJ9 315 aaKnown RBP37.92■■■■□ 3.66
PDCD2-209ENST00000542896 NWD2Q9ULI1 1742 aa37.91■■■■□ 3.66
PDCD2-209ENST00000542896 ONECUT3O60422 494 aaPredicted RBP37.89■■■■□ 3.66
PDCD2-209ENST00000542896 EP400Q96L91 3159 aa37.88■■■■□ 3.66
PDCD2-209ENST00000542896 TRPM3Q9HCF6 1732 aaPredicted RBP37.88■■■■□ 3.65
PDCD2-209ENST00000542896 SF3B2Q13435 895 aaKnown RBP37.87■■■■□ 3.65
PDCD2-209ENST00000542896 BTG4Q9NY30 223 aa37.87■■■■□ 3.65
PDCD2-209ENST00000542896 A0A0G2JS52 829 aa37.86■■■■□ 3.65
PDCD2-209ENST00000542896 PAK3O75914 559 aaPredicted RBP37.86■■■■□ 3.65
PDCD2-209ENST00000542896 MYT1Q01538 1121 aa37.86■■■■□ 3.65
PDCD2-209ENST00000542896 KRT27Q7Z3Y8 459 aa37.86■■■■□ 3.65
PDCD2-209ENST00000542896 BRWD3Q6RI45 1802 aa37.82■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms