RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 CDC42BPBQ9Y5S2 1711 aa6.77□□□□□ -1.33
KDM3B-209ENST00000542866 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.77□□□□□ -1.33
KDM3B-209ENST00000542866 CLUAP1Q96AJ1 413 aa6.77□□□□□ -1.33
KDM3B-209ENST00000542866 MAPK8IP3Q9UPT6 1336 aa6.76□□□□□ -1.33
KDM3B-209ENST00000542866 INSRP06213 1382 aa6.76□□□□□ -1.33
KDM3B-209ENST00000542866 XRCC6P12956 609 aaKnown RBP eCLIP6.76□□□□□ -1.33
KDM3B-209ENST00000542866 VSIG10Q8N0Z9 540 aa6.76□□□□□ -1.33
KDM3B-209ENST00000542866 PANK2Q9BZ23 570 aa6.76□□□□□ -1.33
KDM3B-209ENST00000542866 CGNL1Q0VF96 1302 aa6.76□□□□□ -1.33
KDM3B-209ENST00000542866 ZNF521Q96K83 1311 aa6.76□□□□□ -1.33
KDM3B-209ENST00000542866 COL17A1Q9UMD9 1497 aaPredicted RBP6.76□□□□□ -1.33
KDM3B-209ENST00000542866 E9PCH4 1651 aa6.76□□□□□ -1.33
KDM3B-209ENST00000542866 E9PSI1 815 aa6.76□□□□□ -1.33
KDM3B-209ENST00000542866 IDI1Q13907 227 aa6.76□□□□□ -1.33
KDM3B-209ENST00000542866 STK26Q9P289 416 aa6.76□□□□□ -1.33
KDM3B-209ENST00000542866 CENPJQ9HC77 1338 aaPredicted RBP6.76□□□□□ -1.33
KDM3B-209ENST00000542866 ZMYM3Q14202 1370 aa6.75□□□□□ -1.33
KDM3B-209ENST00000542866 STAC3Q96MF2 364 aa6.75□□□□□ -1.33
KDM3B-209ENST00000542866 TBC1D2Q9BYX2 928 aa6.75□□□□□ -1.33
KDM3B-209ENST00000542866 DMRT2Q9Y5R5 561 aa6.75□□□□□ -1.33
KDM3B-209ENST00000542866 EIF3AQ14152 1382 aaKnown RBP6.75□□□□□ -1.33
KDM3B-209ENST00000542866 TXNDC2Q86VQ3 553 aa6.75□□□□□ -1.33
KDM3B-209ENST00000542866 BCL2L13Q9BXK5 485 aa6.75□□□□□ -1.33
KDM3B-209ENST00000542866 ADGBQ8N7X0 1667 aa6.75□□□□□ -1.33
KDM3B-209ENST00000542866 HSP90AA1P07900 732 aaKnown RBP6.75□□□□□ -1.33
KDM3B-209ENST00000542866 TNRQ92752 1358 aa6.74□□□□□ -1.33
KDM3B-209ENST00000542866 FAM135AQ9P2D6 1515 aa6.74□□□□□ -1.33
KDM3B-209ENST00000542866 AAMPQ13685 434 aa6.74□□□□□ -1.33
KDM3B-209ENST00000542866 HSP90AA2PQ14568 343 aaPredicted RBP6.74□□□□□ -1.33
KDM3B-209ENST00000542866 ZMYND15Q9H091 742 aa6.74□□□□□ -1.33
KDM3B-209ENST00000542866 MAP3K4Q9Y6R4 1608 aa6.74□□□□□ -1.33
KDM3B-209ENST00000542866 NKTRP30414 1462 aaKnown RBP6.74□□□□□ -1.33
KDM3B-209ENST00000542866 MCM4P33991 863 aa6.74□□□□□ -1.33
KDM3B-209ENST00000542866 RRP7AQ9Y3A4 280 aaKnown RBP6.74□□□□□ -1.33
KDM3B-209ENST00000542866 MFAP1P55081 439 aaKnown RBP6.74□□□□□ -1.33
KDM3B-209ENST00000542866 PDE3AQ14432 1141 aa6.74□□□□□ -1.33
KDM3B-209ENST00000542866 ANTXR1Q9H6X2 564 aa6.74□□□□□ -1.33
KDM3B-209ENST00000542866 PDZRN3Q9UPQ7 1066 aa6.74□□□□□ -1.33
KDM3B-209ENST00000542866 TRMT2AQ8IZ69 625 aaKnown RBP6.73□□□□□ -1.33
KDM3B-209ENST00000542866 PMFBP1Q8TBY8 1022 aa6.73□□□□□ -1.33
KDM3B-209ENST00000542866 TRAK2O60296 914 aa6.73□□□□□ -1.33
KDM3B-209ENST00000542866 TNNT2P45379 298 aaPredicted RBP6.73□□□□□ -1.33
KDM3B-209ENST00000542866 SAFB2Q14151 953 aaKnown RBP eCLIP6.73□□□□□ -1.33
KDM3B-209ENST00000542866 CDCA8Q53HL2 280 aa6.73□□□□□ -1.33
KDM3B-209ENST00000542866 ANKLE2Q86XL3 938 aa6.73□□□□□ -1.33
KDM3B-209ENST00000542866 TNNQ9UQP3 1299 aa6.73□□□□□ -1.33
KDM3B-209ENST00000542866 MAST1Q9Y2H9 1570 aa6.73□□□□□ -1.33
KDM3B-209ENST00000542866 KDM5DQ9BY66 1539 aa6.73□□□□□ -1.33
KDM3B-209ENST00000542866 GPRASP1Q5JY77 1395 aa6.73□□□□□ -1.33
KDM3B-209ENST00000542866 TBC1D32Q96NH3 1257 aa6.72□□□□□ -1.33
KDM3B-209ENST00000542866 PPRC1Q5VV67 1664 aaKnown RBP6.72□□□□□ -1.33
KDM3B-209ENST00000542866 RPGRIP1LQ68CZ1 1315 aa6.72□□□□□ -1.33
KDM3B-209ENST00000542866 PCDHB15Q9Y5E8 787 aa6.72□□□□□ -1.33
KDM3B-209ENST00000542866 TMEM132AQ24JP5 1023 aa6.72□□□□□ -1.33
KDM3B-209ENST00000542866 SAMD1Q6SPF0 538 aaPredicted RBP6.72□□□□□ -1.33
KDM3B-209ENST00000542866 MYH16Q9H6N6 1097 aa6.72□□□□□ -1.33
KDM3B-209ENST00000542866 PLXNC1O60486 1568 aa6.72□□□□□ -1.33
KDM3B-209ENST00000542866 CLCN1P35523 988 aa6.71□□□□□ -1.33
KDM3B-209ENST00000542866 RWDD1Q9H446 243 aaPredicted RBP6.71□□□□□ -1.33
KDM3B-209ENST00000542866 TRPM1Q7Z4N2 1603 aa6.71□□□□□ -1.34
KDM3B-209ENST00000542866 RBM10P98175 930 aaKnown RBP6.71□□□□□ -1.34
KDM3B-209ENST00000542866 TRIM44Q96DX7 344 aaPredicted RBP6.71□□□□□ -1.34
KDM3B-209ENST00000542866 CHMP5Q9NZZ3 219 aa6.71□□□□□ -1.34
KDM3B-209ENST00000542866 WWC1Q8IX03 1113 aa6.71□□□□□ -1.34
KDM3B-209ENST00000542866 CHMP4AQ9BY43 222 aa6.71□□□□□ -1.34
KDM3B-209ENST00000542866 C22orf23Q9BZE7 217 aa6.71□□□□□ -1.34
KDM3B-209ENST00000542866 TRAK1Q9UPV9 953 aa6.71□□□□□ -1.34
KDM3B-209ENST00000542866 RLBP1P12271 317 aa6.7□□□□□ -1.34
KDM3B-209ENST00000542866 MRE11P49959 708 aa6.7□□□□□ -1.34
KDM3B-209ENST00000542866 PLCB2Q00722 1185 aa6.7□□□□□ -1.34
KDM3B-209ENST00000542866 TAF7LQ5H9L4 462 aa6.7□□□□□ -1.34
KDM3B-209ENST00000542866 FBXO3Q9UK99 471 aa6.7□□□□□ -1.34
KDM3B-209ENST00000542866 NPATQ14207 1427 aa6.7□□□□□ -1.34
KDM3B-209ENST00000542866 CROCC2H7BZ55 1655 aa6.7□□□□□ -1.34
KDM3B-209ENST00000542866 FSD2A1L4K1 749 aa6.7□□□□□ -1.34
KDM3B-209ENST00000542866 CFAP70Q5T0N1 1121 aa6.7□□□□□ -1.34
KDM3B-209ENST00000542866 HSCBQ8IWL3 235 aa6.7□□□□□ -1.34
KDM3B-209ENST00000542866 SLC26A8Q96RN1 970 aa6.7□□□□□ -1.34
KDM3B-209ENST00000542866 GRPEL1Q9HAV7 217 aa6.7□□□□□ -1.34
KDM3B-209ENST00000542866 INO80Q9ULG1 1556 aaPredicted RBP6.69□□□□□ -1.34
KDM3B-209ENST00000542866 DIP2CQ9Y2E4 1556 aa6.69□□□□□ -1.34
KDM3B-209ENST00000542866 RARSP54136 660 aaKnown RBP6.69□□□□□ -1.34
KDM3B-209ENST00000542866 PLA2R1Q13018 1463 aa6.69□□□□□ -1.34
KDM3B-209ENST00000542866 SRPK2P78362 688 aaKnown RBP6.69□□□□□ -1.34
KDM3B-209ENST00000542866 FTSJ3Q8IY81 847 aaKnown RBP6.69□□□□□ -1.34
KDM3B-209ENST00000542866 PRDM15P57071 1507 aaPredicted RBP6.69□□□□□ -1.34
KDM3B-209ENST00000542866 ARHGEF40Q8TER5 1519 aa6.69□□□□□ -1.34
KDM3B-209ENST00000542866 ESPNB1AK53 854 aa6.69□□□□□ -1.34
KDM3B-209ENST00000542866 TMEM132EQ6IEE7 984 aa6.69□□□□□ -1.34
KDM3B-209ENST00000542866 FOXD4L1Q9NU39 408 aa6.68□□□□□ -1.34
KDM3B-209ENST00000542866 RRP9O43818 475 aaKnown RBP6.68□□□□□ -1.34
KDM3B-209ENST00000542866 PIK3C2GO75747 1445 aa6.68□□□□□ -1.34
KDM3B-209ENST00000542866 TCP11L2Q8N4U5 519 aa6.68□□□□□ -1.34
KDM3B-209ENST00000542866 KIDINS220Q9ULH0 1771 aa6.67□□□□□ -1.34
KDM3B-209ENST00000542866 ASXL1Q8IXJ9 1541 aa6.67□□□□□ -1.34
KDM3B-209ENST00000542866 DDX11L8A8MPP1 907 aa6.67□□□□□ -1.34
KDM3B-209ENST00000542866 MORC1Q86VD1 984 aa6.67□□□□□ -1.34
KDM3B-209ENST00000542866 NLRP1Q9C000 1473 aa6.67□□□□□ -1.34
KDM3B-209ENST00000542866 ABCA6Q8N139 1617 aa6.67□□□□□ -1.34
KDM3B-209ENST00000542866 NINLQ9Y2I6 1382 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms