RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 PIK3R4Q99570 1358 aa18.33■□□□□ 0.53
CHFR-221ENST00000542714 ADGRB2O60241 1585 aa18.33■□□□□ 0.52
CHFR-221ENST00000542714 PTCH1Q13635 1447 aa18.32■□□□□ 0.52
CHFR-221ENST00000542714 MINK1Q8N4C8 1332 aaPredicted RBP18.32■□□□□ 0.52
CHFR-221ENST00000542714 NCKAP5LQ9HCH0 1330 aa18.32■□□□□ 0.52
CHFR-221ENST00000542714 EVC2Q86UK5 1308 aa18.31■□□□□ 0.52
CHFR-221ENST00000542714 STRCQ7RTU9 1775 aa18.3■□□□□ 0.52
CHFR-221ENST00000542714 ANP32CO43423 234 aa18.3■□□□□ 0.52
CHFR-221ENST00000542714 PUS7Q96PZ0 661 aaKnown RBP18.3■□□□□ 0.52
CHFR-221ENST00000542714 NWD1Q149M9 1564 aa18.3■□□□□ 0.52
CHFR-221ENST00000542714 AMOTL2Q9Y2J4 779 aa18.29■□□□□ 0.52
CHFR-221ENST00000542714 PER1O15534 1290 aaPredicted RBP18.28■□□□□ 0.52
CHFR-221ENST00000542714 PANK3Q9H999 370 aa18.28■□□□□ 0.52
CHFR-221ENST00000542714 CABP2Q9NPB3 220 aa18.27■□□□□ 0.52
CHFR-221ENST00000542714 HSPA2P54652 639 aa18.26■□□□□ 0.51
CHFR-221ENST00000542714 PRKRIP1Q9H875 184 aaPredicted RBP18.25■□□□□ 0.51
CHFR-221ENST00000542714 NALCNQ8IZF0 1738 aa18.24■□□□□ 0.51
CHFR-221ENST00000542714 CDK19Q9BWU1 502 aa18.24■□□□□ 0.51
CHFR-221ENST00000542714 TOPAZ1Q8N9V7 1692 aa18.24■□□□□ 0.51
CHFR-221ENST00000542714 STRCP1A6NGW2 1772 aa18.24■□□□□ 0.51
CHFR-221ENST00000542714 KCNA6P17658 529 aa18.23■□□□□ 0.51
CHFR-221ENST00000542714 USP32Q8NFA0 1604 aa18.23■□□□□ 0.51
CHFR-221ENST00000542714 ATAD2Q6PL18 1390 aa18.22■□□□□ 0.51
CHFR-221ENST00000542714 SRPK2P78362 688 aaKnown RBP18.22■□□□□ 0.51
CHFR-221ENST00000542714 WASLO00401 505 aaPredicted RBP18.21■□□□□ 0.51
CHFR-221ENST00000542714 SLC12A5Q9H2X9 1139 aa18.21■□□□□ 0.51
CHFR-221ENST00000542714 CD163L1Q9NR16 1453 aa18.2■□□□□ 0.5
CHFR-221ENST00000542714 NINLQ9Y2I6 1382 aa18.2■□□□□ 0.5
CHFR-221ENST00000542714 CCER2I3L3R5 266 aa18.2■□□□□ 0.5
CHFR-221ENST00000542714 FMN2Q9NZ56 1722 aa18.2■□□□□ 0.5
CHFR-221ENST00000542714 ATP7BP35670 1465 aa18.2■□□□□ 0.5
CHFR-221ENST00000542714 CARD14Q9BXL6 1004 aa18.19■□□□□ 0.5
CHFR-221ENST00000542714 RGPD8O14715 1765 aaPredicted RBP18.18■□□□□ 0.5
CHFR-221ENST00000542714 AKAP12Q02952 1782 aa18.18■□□□□ 0.5
CHFR-221ENST00000542714 TMC1Q8TDI8 760 aa18.18■□□□□ 0.5
CHFR-221ENST00000542714 ITSN1Q15811 1721 aa18.18■□□□□ 0.5
CHFR-221ENST00000542714 ANKRD36BQ8N2N9 1353 aa18.17■□□□□ 0.5
CHFR-221ENST00000542714 PARD3Q8TEW0 1356 aa18.17■□□□□ 0.5
CHFR-221ENST00000542714 CDC42BPGQ6DT37 1551 aa18.17■□□□□ 0.5
CHFR-221ENST00000542714 NKTRP30414 1462 aaKnown RBP18.16■□□□□ 0.5
CHFR-221ENST00000542714 AMER1Q5JTC6 1135 aaPredicted RBP18.16■□□□□ 0.5
CHFR-221ENST00000542714 PRR36Q9H6K5 1346 aa18.16■□□□□ 0.5
CHFR-221ENST00000542714 A0A1W2PP64 1363 aa18.16■□□□□ 0.5
CHFR-221ENST00000542714 KTN1Q86UP2 1357 aaKnown RBP18.16■□□□□ 0.5
CHFR-221ENST00000542714 NPC1L1Q9UHC9 1359 aa18.16■□□□□ 0.5
CHFR-221ENST00000542714 NSD3Q9BZ95 1437 aa18.15■□□□□ 0.5
CHFR-221ENST00000542714 MON2Q7Z3U7 1717 aa18.15■□□□□ 0.5
CHFR-221ENST00000542714 CNGB1Q14028 1251 aaPredicted RBP18.14■□□□□ 0.49
CHFR-221ENST00000542714 KNSTRNQ9Y448 316 aa18.14■□□□□ 0.49
CHFR-221ENST00000542714 PPIP5K1Q6PFW1 1433 aa18.14■□□□□ 0.49
CHFR-221ENST00000542714 ANKRD26Q9UPS8 1709 aa18.13■□□□□ 0.49
CHFR-221ENST00000542714 CCDC184Q52MB2 194 aa18.13■□□□□ 0.49
CHFR-221ENST00000542714 NUDT16Q96DE0 195 aaKnown RBP18.13■□□□□ 0.49
CHFR-221ENST00000542714 KIF20BQ96Q89 1820 aa18.13■□□□□ 0.49
CHFR-221ENST00000542714 ADGRL3Q9HAR2 1447 aa18.13■□□□□ 0.49
CHFR-221ENST00000542714 RALBP1Q15311 655 aa18.12■□□□□ 0.49
CHFR-221ENST00000542714 CC2D1BQ5T0F9 858 aaKnown RBP18.12■□□□□ 0.49
CHFR-221ENST00000542714 CABP1Q9NZU7 370 aa18.11■□□□□ 0.49
CHFR-221ENST00000542714 XIRP1Q702N8 1843 aaKnown RBP18.11■□□□□ 0.49
CHFR-221ENST00000542714 NRKQ7Z2Y5 1582 aa18.1■□□□□ 0.49
CHFR-221ENST00000542714 CPSF1Q10570 1443 aaKnown RBP18.1■□□□□ 0.49
CHFR-221ENST00000542714 ANKARQ7Z5J8 1434 aa18.08■□□□□ 0.49
CHFR-221ENST00000542714 MYBBP1AQ9BQG0 1328 aaKnown RBP18.08■□□□□ 0.49
CHFR-221ENST00000542714 RBM33Q96EV2 1170 aaKnown RBP18.08■□□□□ 0.48
CHFR-221ENST00000542714 TERF2IPQ9NYB0 399 aa18.08■□□□□ 0.48
CHFR-221ENST00000542714 CCDC61Q9Y6R9 512 aa18.08■□□□□ 0.48
CHFR-221ENST00000542714 NUTM2FA1L443 756 aa18.05■□□□□ 0.48
CHFR-221ENST00000542714 HDGFL2Q7Z4V5 671 aaPredicted RBP18.05■□□□□ 0.48
CHFR-221ENST00000542714 BRD4O60885 1362 aaPredicted RBP18.04■□□□□ 0.48
CHFR-221ENST00000542714 PROSER2Q86WR7 435 aaPredicted RBP18.04■□□□□ 0.48
CHFR-221ENST00000542714 NSD2O96028 1365 aa18.04■□□□□ 0.48
CHFR-221ENST00000542714 CGNL1Q0VF96 1302 aa18.03■□□□□ 0.48
CHFR-221ENST00000542714 PLEKHG3A1L390 1219 aa18.03■□□□□ 0.48
CHFR-221ENST00000542714 MRS2Q9HD23 443 aa18.03■□□□□ 0.48
CHFR-221ENST00000542714 EDC4Q6P2E9 1401 aaKnown RBP18.03■□□□□ 0.48
CHFR-221ENST00000542714 YTHDC1Q96MU7 727 aaKnown RBP18.02■□□□□ 0.48
CHFR-221ENST00000542714 TMEM94Q12767 1356 aa18.02■□□□□ 0.47
CHFR-221ENST00000542714 NCOA3Q9Y6Q9 1424 aa18.01■□□□□ 0.47
CHFR-221ENST00000542714 PPP2R1AP30153 589 aa18.01■□□□□ 0.47
CHFR-221ENST00000542714 NLRP13Q86W25 1043 aa18.01■□□□□ 0.47
CHFR-221ENST00000542714 POLR3AO14802 1390 aaPredicted RBP18■□□□□ 0.47
CHFR-221ENST00000542714 ACEP12821 1306 aa17.99■□□□□ 0.47
CHFR-221ENST00000542714 USP6P35125 1406 aa17.99■□□□□ 0.47
CHFR-221ENST00000542714 LRRC7Q96NW7 1537 aa17.99■□□□□ 0.47
CHFR-221ENST00000542714 ZNF335Q9H4Z2 1342 aaPredicted RBP17.98■□□□□ 0.47
CHFR-221ENST00000542714 SSH2Q76I76 1423 aa17.98■□□□□ 0.47
CHFR-221ENST00000542714 FYB1O15117 783 aa17.97■□□□□ 0.47
CHFR-221ENST00000542714 C14orf37Q86TY3 774 aa17.97■□□□□ 0.47
CHFR-221ENST00000542714 DCCP43146 1447 aa17.97■□□□□ 0.47
CHFR-221ENST00000542714 MORC1Q86VD1 984 aa17.96■□□□□ 0.47
CHFR-221ENST00000542714 ZNF692Q9BU19 519 aaPredicted RBP17.96■□□□□ 0.47
CHFR-221ENST00000542714 GGNBP2Q9H3C7 697 aa17.96■□□□□ 0.47
CHFR-221ENST00000542714 PMFBP1Q8TBY8 1022 aa17.95■□□□□ 0.46
CHFR-221ENST00000542714 KIF1AQ12756 1690 aa17.95■□□□□ 0.46
CHFR-221ENST00000542714 MARF1Q9Y4F3 1742 aaKnown RBP17.95■□□□□ 0.46
CHFR-221ENST00000542714 PIK3C2AO00443 1686 aa17.94■□□□□ 0.46
CHFR-221ENST00000542714 USP54Q70EL1 1684 aa17.94■□□□□ 0.46
CHFR-221ENST00000542714 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.94■□□□□ 0.46
CHFR-221ENST00000542714 PNISRQ8TF01 805 aaKnown RBP17.94■□□□□ 0.46
CHFR-221ENST00000542714 C19orf44Q9H6X5 657 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 174.8 ms