RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 SYAP1Q96A49 352 aaPredicted RBP10.16□□□□□ -0.78
PRKAB1-207ENST00000542698 ANO8Q9HCE9 1232 aaPredicted RBP10.16□□□□□ -0.78
PRKAB1-207ENST00000542698 ATF7IPQ6VMQ6 1270 aa10.15□□□□□ -0.78
PRKAB1-207ENST00000542698 NUTM2FA1L443 756 aa10.15□□□□□ -0.78
PRKAB1-207ENST00000542698 MRE11P49959 708 aa10.15□□□□□ -0.78
PRKAB1-207ENST00000542698 LMOD2Q6P5Q4 547 aa10.15□□□□□ -0.78
PRKAB1-207ENST00000542698 AMER1Q5JTC6 1135 aaPredicted RBP10.15□□□□□ -0.79
PRKAB1-207ENST00000542698 NOB1Q9ULX3 412 aaKnown RBP10.15□□□□□ -0.79
PRKAB1-207ENST00000542698 LRPPRCP42704 1394 aaKnown RBP10.14□□□□□ -0.79
PRKAB1-207ENST00000542698 NKTRP30414 1462 aaKnown RBP10.14□□□□□ -0.79
PRKAB1-207ENST00000542698 FGD1P98174 961 aa10.14□□□□□ -0.79
PRKAB1-207ENST00000542698 FBXO41Q8TF61 875 aa10.14□□□□□ -0.79
PRKAB1-207ENST00000542698 SPATA31E1Q6ZUB1 1445 aa10.14□□□□□ -0.79
PRKAB1-207ENST00000542698 TEX14Q8IWB6 1497 aa10.14□□□□□ -0.79
PRKAB1-207ENST00000542698 REC8O95072 547 aa10.14□□□□□ -0.79
PRKAB1-207ENST00000542698 ZRSR1Q15695 479 aaKnown RBP10.13□□□□□ -0.79
PRKAB1-207ENST00000542698 FOXD4L5Q5VV16 416 aaPredicted RBP10.13□□□□□ -0.79
PRKAB1-207ENST00000542698 NOL8Q76FK4 1167 aaKnown RBP10.13□□□□□ -0.79
PRKAB1-207ENST00000542698 FOXD4L4Q8WXT5 416 aaPredicted RBP10.13□□□□□ -0.79
PRKAB1-207ENST00000542698 PZPP20742 1482 aa10.13□□□□□ -0.79
PRKAB1-207ENST00000542698 KIF14Q15058 1648 aa10.13□□□□□ -0.79
PRKAB1-207ENST00000542698 PRKAR2BP31323 418 aa10.13□□□□□ -0.79
PRKAB1-207ENST00000542698 HSP90AA2PQ14568 343 aaPredicted RBP10.13□□□□□ -0.79
PRKAB1-207ENST00000542698 IGHDP01880 384 aa10.12□□□□□ -0.79
PRKAB1-207ENST00000542698 KIAA2012Q0VF49 1180 aa10.12□□□□□ -0.79
PRKAB1-207ENST00000542698 PRAG1Q86YV5 1406 aa10.12□□□□□ -0.79
PRKAB1-207ENST00000542698 CHMP4AQ9BY43 222 aa10.12□□□□□ -0.79
PRKAB1-207ENST00000542698 MCM4P33991 863 aa10.12□□□□□ -0.79
PRKAB1-207ENST00000542698 AMPHP49418 695 aa10.12□□□□□ -0.79
PRKAB1-207ENST00000542698 NUCB2P80303 420 aa10.11□□□□□ -0.79
PRKAB1-207ENST00000542698 RILPL2Q969X0 211 aa10.11□□□□□ -0.79
PRKAB1-207ENST00000542698 ATP10BO94823 1461 aa10.11□□□□□ -0.79
PRKAB1-207ENST00000542698 FAM43AQ8N2R8 423 aa10.11□□□□□ -0.79
PRKAB1-207ENST00000542698 RAPGEF6Q8TEU7 1601 aa10.11□□□□□ -0.79
PRKAB1-207ENST00000542698 NSD3Q9BZ95 1437 aa10.11□□□□□ -0.79
PRKAB1-207ENST00000542698 NGDNQ8NEJ9 315 aaKnown RBP10.11□□□□□ -0.79
PRKAB1-207ENST00000542698 ADGRF5Q8IZF2 1346 aa10.11□□□□□ -0.79
PRKAB1-207ENST00000542698 TMPOP42166 694 aaKnown RBP10.11□□□□□ -0.79
PRKAB1-207ENST00000542698 CHAF1AQ13111 956 aaPredicted RBP10.11□□□□□ -0.79
PRKAB1-207ENST00000542698 INTS3Q68E01 1043 aaKnown RBP10.11□□□□□ -0.79
PRKAB1-207ENST00000542698 GCC1Q96CN9 775 aa10.11□□□□□ -0.79
PRKAB1-207ENST00000542698 CDC45O75419 566 aa10.1□□□□□ -0.79
PRKAB1-207ENST00000542698 PRAM1Q96QH2 718 aa10.1□□□□□ -0.79
PRKAB1-207ENST00000542698 CHD1O14646 1710 aa10.1□□□□□ -0.79
PRKAB1-207ENST00000542698 SCAF11Q99590 1463 aaKnown RBP10.1□□□□□ -0.79
PRKAB1-207ENST00000542698 UHRF1BP1Q6BDS2 1440 aa10.1□□□□□ -0.79
PRKAB1-207ENST00000542698 RPGRIP1LQ68CZ1 1315 aa10.09□□□□□ -0.79
PRKAB1-207ENST00000542698 C1orf115Q9H7X2 142 aa10.09□□□□□ -0.79
PRKAB1-207ENST00000542698 DISP1Q96F81 1524 aa10.09□□□□□ -0.79
PRKAB1-207ENST00000542698 C8orf34Q49A92 452 aa10.09□□□□□ -0.79
PRKAB1-207ENST00000542698 SSH1Q8WYL5 1049 aa10.09□□□□□ -0.79
PRKAB1-207ENST00000542698 CLASP1Q7Z460 1538 aa10.09□□□□□ -0.79
PRKAB1-207ENST00000542698 TWISTNBQ3B726 338 aaPredicted RBP10.08□□□□□ -0.8
PRKAB1-207ENST00000542698 CHD1LQ86WJ1 897 aa10.08□□□□□ -0.8
PRKAB1-207ENST00000542698 CABP1Q9NZU7 370 aa10.08□□□□□ -0.8
PRKAB1-207ENST00000542698 FOXD4L6Q3SYB3 417 aaPredicted RBP10.08□□□□□ -0.8
PRKAB1-207ENST00000542698 FOXD4L3Q6VB84 417 aaPredicted RBP10.08□□□□□ -0.8
PRKAB1-207ENST00000542698 TMEM57Q8N5G2 664 aa10.08□□□□□ -0.8
PRKAB1-207ENST00000542698 TBC1D2Q9BYX2 928 aa10.08□□□□□ -0.8
PRKAB1-207ENST00000542698 PHF14O94880 888 aa10.08□□□□□ -0.8
PRKAB1-207ENST00000542698 MCTP1Q6DN14 999 aa10.08□□□□□ -0.8
PRKAB1-207ENST00000542698 KIAA0556O60303 1618 aa10.08□□□□□ -0.8
PRKAB1-207ENST00000542698 PLEKHH1Q9ULM0 1364 aa10.08□□□□□ -0.8
PRKAB1-207ENST00000542698 ARHGEF12Q9NZN5 1544 aa10.07□□□□□ -0.8
PRKAB1-207ENST00000542698 ZNF428Q96B54 188 aa10.07□□□□□ -0.8
PRKAB1-207ENST00000542698 NAP1L2Q9ULW6 460 aaPredicted RBP10.07□□□□□ -0.8
PRKAB1-207ENST00000542698 HDAC5Q9UQL6 1122 aa10.07□□□□□ -0.8
PRKAB1-207ENST00000542698 DRC7Q8IY82 874 aa10.07□□□□□ -0.8
PRKAB1-207ENST00000542698 LTV1Q96GA3 475 aaPredicted RBP10.07□□□□□ -0.8
PRKAB1-207ENST00000542698 SLC52A1Q9NWF4 448 aa10.07□□□□□ -0.8
PRKAB1-207ENST00000542698 DNMT1P26358 1616 aaKnown RBP10.07□□□□□ -0.8
PRKAB1-207ENST00000542698 FCHSD2O94868 740 aa10.07□□□□□ -0.8
PRKAB1-207ENST00000542698 GCC2Q8IWJ2 1684 aa10.07□□□□□ -0.8
PRKAB1-207ENST00000542698 ANO2Q9NQ90 1003 aa10.06□□□□□ -0.8
PRKAB1-207ENST00000542698 ISY1Q9ULR0 285 aaKnown RBP10.06□□□□□ -0.8
PRKAB1-207ENST00000542698 NASPP49321 788 aaPredicted RBP10.06□□□□□ -0.8
PRKAB1-207ENST00000542698 CDK19Q9BWU1 502 aa10.06□□□□□ -0.8
PRKAB1-207ENST00000542698 PCDHB15Q9Y5E8 787 aa10.06□□□□□ -0.8
PRKAB1-207ENST00000542698 DENND4BO75064 1496 aaPredicted RBP10.05□□□□□ -0.8
PRKAB1-207ENST00000542698 FKBP5Q13451 457 aaPredicted RBP10.05□□□□□ -0.8
PRKAB1-207ENST00000542698 EID1Q9Y6B2 187 aa10.05□□□□□ -0.8
PRKAB1-207ENST00000542698 KDM6BO15054 1643 aa10.05□□□□□ -0.8
PRKAB1-207ENST00000542698 FAM135AQ9P2D6 1515 aa10.05□□□□□ -0.8
PRKAB1-207ENST00000542698 NUP160Q12769 1436 aa10.05□□□□□ -0.8
PRKAB1-207ENST00000542698 RABEP1Q15276 862 aa10.05□□□□□ -0.8
PRKAB1-207ENST00000542698 CSPP1Q1MSJ5 1256 aa10.05□□□□□ -0.8
PRKAB1-207ENST00000542698 GPATCH3Q96I76 525 aa10.05□□□□□ -0.8
PRKAB1-207ENST00000542698 TBC1D32Q96NH3 1257 aa10.05□□□□□ -0.8
PRKAB1-207ENST00000542698 CIZ1Q9ULV3 898 aaPredicted RBP10.05□□□□□ -0.8
PRKAB1-207ENST00000542698 ITSN2Q9NZM3 1697 aa10.05□□□□□ -0.8
PRKAB1-207ENST00000542698 LMTK3Q96Q04 1460 aa10.05□□□□□ -0.8
PRKAB1-207ENST00000542698 GPRASP1Q5JY77 1395 aa10.05□□□□□ -0.8
PRKAB1-207ENST00000542698 KDM5BQ9UGL1 1544 aa10.05□□□□□ -0.8
PRKAB1-207ENST00000542698 TRIM27P14373 513 aa10.04□□□□□ -0.8
PRKAB1-207ENST00000542698 ERCC6L2Q5T890 1561 aa10.04□□□□□ -0.8
PRKAB1-207ENST00000542698 K7ELQ4 463 aaPredicted RBP10.04□□□□□ -0.8
PRKAB1-207ENST00000542698 ARID3AQ99856 593 aa10.04□□□□□ -0.8
PRKAB1-207ENST00000542698 GRPEL1Q9HAV7 217 aa10.04□□□□□ -0.8
PRKAB1-207ENST00000542698 TSPYL4Q9UJ04 414 aa10.04□□□□□ -0.8
PRKAB1-207ENST00000542698 NECTIN2Q92692 538 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms