RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 SLC4A1APQ9BWU0 796 aaKnown RBP13.47□□□□□ -0.25
UBC-211ENST00000542416 LAMC1P11047 1609 aa13.46□□□□□ -0.25
UBC-211ENST00000542416 FOXO3O43524 673 aa13.46□□□□□ -0.25
UBC-211ENST00000542416 GJD4Q96KN9 370 aaPredicted RBP13.46□□□□□ -0.25
UBC-211ENST00000542416 NAIPQ13075 1403 aa13.46□□□□□ -0.26
UBC-211ENST00000542416 CLTCL1P53675 1640 aa13.46□□□□□ -0.26
UBC-211ENST00000542416 NALCNQ8IZF0 1738 aa13.44□□□□□ -0.26
UBC-211ENST00000542416 MYOM2P54296 1465 aa13.44□□□□□ -0.26
UBC-211ENST00000542416 PPARGC1BQ86YN6 1023 aaKnown RBP13.44□□□□□ -0.26
UBC-211ENST00000542416 RRBP1Q9P2E9 1410 aaKnown RBP13.43□□□□□ -0.26
UBC-211ENST00000542416 UNC5CLQ8IV45 518 aa13.42□□□□□ -0.26
UBC-211ENST00000542416 BCL9LQ86UU0 1499 aa13.42□□□□□ -0.26
UBC-211ENST00000542416 ABCC11Q96J66 1382 aa13.41□□□□□ -0.26
UBC-211ENST00000542416 ANKRD30BQ9BXX2 1392 aa13.41□□□□□ -0.26
UBC-211ENST00000542416 XPCQ01831 940 aaPredicted RBP13.4□□□□□ -0.26
UBC-211ENST00000542416 SF3B2Q13435 895 aaKnown RBP13.4□□□□□ -0.26
UBC-211ENST00000542416 STK26Q9P289 416 aa13.4□□□□□ -0.26
UBC-211ENST00000542416 PXDNQ92626 1479 aa13.4□□□□□ -0.26
UBC-211ENST00000542416 CDC42BPGQ6DT37 1551 aa13.4□□□□□ -0.26
UBC-211ENST00000542416 SPATA31A3Q5VYP0 1347 aa13.39□□□□□ -0.27
UBC-211ENST00000542416 TECPR2O15040 1411 aa13.39□□□□□ -0.27
UBC-211ENST00000542416 COL22A1Q8NFW1 1626 aaPredicted RBP13.39□□□□□ -0.27
UBC-211ENST00000542416 KIF1BO60333 1816 aa13.39□□□□□ -0.27
UBC-211ENST00000542416 PSME1Q06323 249 aa13.39□□□□□ -0.27
UBC-211ENST00000542416 WAPLQ7Z5K2 1190 aa13.39□□□□□ -0.27
UBC-211ENST00000542416 SIRT1Q96EB6 747 aa13.39□□□□□ -0.27
UBC-211ENST00000542416 ADGRF5Q8IZF2 1346 aa13.39□□□□□ -0.27
UBC-211ENST00000542416 HAP1P54257 671 aaPredicted RBP13.38□□□□□ -0.27
UBC-211ENST00000542416 CCDC144AA2RUR9 1427 aa13.38□□□□□ -0.27
UBC-211ENST00000542416 BLMP54132 1417 aaPredicted RBP13.38□□□□□ -0.27
UBC-211ENST00000542416 NUTM2FA1L443 756 aa13.37□□□□□ -0.27
UBC-211ENST00000542416 RGL3Q3MIN7 710 aa13.37□□□□□ -0.27
UBC-211ENST00000542416 KRT28Q7Z3Y7 464 aa13.37□□□□□ -0.27
UBC-211ENST00000542416 ACIN1Q9UKV3 1341 aaKnown RBP13.37□□□□□ -0.27
UBC-211ENST00000542416 SLIT2O94813 1529 aa13.35□□□□□ -0.27
UBC-211ENST00000542416 VPS72Q15906 364 aa13.35□□□□□ -0.27
UBC-211ENST00000542416 TMEM132EQ6IEE7 984 aa13.34□□□□□ -0.27
UBC-211ENST00000542416 SEPT12Q8IYM1 358 aa13.34□□□□□ -0.27
UBC-211ENST00000542416 PHF8Q9UPP1 1060 aa13.34□□□□□ -0.27
UBC-211ENST00000542416 RALGAPBQ86X10 1494 aa13.34□□□□□ -0.27
UBC-211ENST00000542416 ONECUT3O60422 494 aaPredicted RBP13.33□□□□□ -0.28
UBC-211ENST00000542416 EP400Q96L91 3159 aa13.33□□□□□ -0.28
UBC-211ENST00000542416 SPATA31E1Q6ZUB1 1445 aa13.32□□□□□ -0.28
UBC-211ENST00000542416 MPHOSPH9Q99550 1183 aa13.32□□□□□ -0.28
UBC-211ENST00000542416 C14orf93Q9H972 538 aaKnown RBP13.32□□□□□ -0.28
UBC-211ENST00000542416 CCDC9Q9Y3X0 531 aaKnown RBP13.32□□□□□ -0.28
UBC-211ENST00000542416 SBNO1A3KN83 1393 aa13.32□□□□□ -0.28
UBC-211ENST00000542416 ARHGEF10O15013 1369 aa13.32□□□□□ -0.28
UBC-211ENST00000542416 DHX57Q6P158 1386 aaKnown RBP13.32□□□□□ -0.28
UBC-211ENST00000542416 YTHDC2Q9H6S0 1430 aaKnown RBP13.31□□□□□ -0.28
UBC-211ENST00000542416 KRT27Q7Z3Y8 459 aa13.31□□□□□ -0.28
UBC-211ENST00000542416 PLEKHH1Q9ULM0 1364 aa13.31□□□□□ -0.28
UBC-211ENST00000542416 PIK3C2GO75747 1445 aa13.3□□□□□ -0.28
UBC-211ENST00000542416 TNS3Q68CZ2 1445 aa13.3□□□□□ -0.28
UBC-211ENST00000542416 PPLO60437 1756 aa13.3□□□□□ -0.28
UBC-211ENST00000542416 BAG6P46379 1132 aa13.29□□□□□ -0.28
UBC-211ENST00000542416 LMOD2Q6P5Q4 547 aa13.29□□□□□ -0.28
UBC-211ENST00000542416 DEFB132Q7Z7B7 95 aa13.29□□□□□ -0.28
UBC-211ENST00000542416 CABLES1Q8TDN4 633 aa13.28□□□□□ -0.28
UBC-211ENST00000542416 A0A0G2JS52 829 aa13.27□□□□□ -0.29
UBC-211ENST00000542416 MYT1Q01538 1121 aa13.27□□□□□ -0.29
UBC-211ENST00000542416 POGKQ9P215 609 aa13.27□□□□□ -0.29
UBC-211ENST00000542416 KIF1AQ12756 1690 aa13.27□□□□□ -0.29
UBC-211ENST00000542416 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.27□□□□□ -0.29
UBC-211ENST00000542416 FAM83GA6ND36 823 aa13.26□□□□□ -0.29
UBC-211ENST00000542416 GLI3P10071 1580 aa13.26□□□□□ -0.29
UBC-211ENST00000542416 PRAM1Q96QH2 718 aa13.26□□□□□ -0.29
UBC-211ENST00000542416 USP32Q8NFA0 1604 aa13.25□□□□□ -0.29
UBC-211ENST00000542416 NRXN1Q9ULB1 1477 aa13.25□□□□□ -0.29
UBC-211ENST00000542416 GPRASP1Q5JY77 1395 aa13.25□□□□□ -0.29
UBC-211ENST00000542416 CFAP70Q5T0N1 1121 aa13.25□□□□□ -0.29
UBC-211ENST00000542416 ANKARQ7Z5J8 1434 aa13.24□□□□□ -0.29
UBC-211ENST00000542416 EIF3AQ14152 1382 aaKnown RBP13.24□□□□□ -0.29
UBC-211ENST00000542416 PLEKHG5O94827 1062 aa13.24□□□□□ -0.29
UBC-211ENST00000542416 MARF1Q9Y4F3 1742 aaKnown RBP13.24□□□□□ -0.29
UBC-211ENST00000542416 SAFB2Q14151 953 aaKnown RBP eCLIP13.23□□□□□ -0.29
UBC-211ENST00000542416 FAM98CQ17RN3 349 aaKnown RBP13.23□□□□□ -0.29
UBC-211ENST00000542416 PMFBP1Q8TBY8 1022 aa13.23□□□□□ -0.29
UBC-211ENST00000542416 BTG4Q9NY30 223 aa13.23□□□□□ -0.29
UBC-211ENST00000542416 KNDC1Q76NI1 1749 aa13.22□□□□□ -0.29
UBC-211ENST00000542416 FMN2Q9NZ56 1722 aa13.22□□□□□ -0.29
UBC-211ENST00000542416 STAC3Q96MF2 364 aa13.21□□□□□ -0.29
UBC-211ENST00000542416 HRCP23327 699 aa13.2□□□□□ -0.3
UBC-211ENST00000542416 SPATA31A5Q5VU36 1347 aa13.19□□□□□ -0.3
UBC-211ENST00000542416 SPATA31A7Q8IWB4 1347 aa13.19□□□□□ -0.3
UBC-211ENST00000542416 NGDNQ8NEJ9 315 aaKnown RBP13.19□□□□□ -0.3
UBC-211ENST00000542416 DLC1Q96QB1 1528 aa13.18□□□□□ -0.3
UBC-211ENST00000542416 PSDA5PKW4 1024 aaPredicted RBP13.18□□□□□ -0.3
UBC-211ENST00000542416 EN1Q05925 392 aaPredicted RBP13.18□□□□□ -0.3
UBC-211ENST00000542416 PRDM11Q9NQV5 511 aa13.18□□□□□ -0.3
UBC-211ENST00000542416 NWD2Q9ULI1 1742 aa13.18□□□□□ -0.3
UBC-211ENST00000542416 WASLO00401 505 aaPredicted RBP13.17□□□□□ -0.3
UBC-211ENST00000542416 PAK3O75914 559 aaPredicted RBP13.17□□□□□ -0.3
UBC-211ENST00000542416 FAM196AQ6ZSG2 479 aa13.17□□□□□ -0.3
UBC-211ENST00000542416 TRAK1Q9UPV9 953 aa13.17□□□□□ -0.3
UBC-211ENST00000542416 HIRIP3Q9BW71 556 aaPredicted RBP13.16□□□□□ -0.3
UBC-211ENST00000542416 MINK1Q8N4C8 1332 aaPredicted RBP13.15□□□□□ -0.3
UBC-211ENST00000542416 DISP2A7MBM2 1401 aa13.15□□□□□ -0.3
UBC-211ENST00000542416 LRP5O75197 1615 aa13.15□□□□□ -0.3
UBC-211ENST00000542416 IFT172Q9UG01 1749 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms