RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 PHF14O94880 888 aa4.26□□□□□ -1.73
TRAV1-1-201ENST00000542354 TYW1BQ6NUM6 668 aa4.26□□□□□ -1.73
TRAV1-1-201ENST00000542354 NGLY1Q96IV0 654 aa4.26□□□□□ -1.73
TRAV1-1-201ENST00000542354 JCADQ9P266 1359 aa4.26□□□□□ -1.73
TRAV1-1-201ENST00000542354 SPATA31A6Q5VVP1 1343 aa4.25□□□□□ -1.73
TRAV1-1-201ENST00000542354 ZCCHC11Q5TAX3 1644 aaKnown RBP4.25□□□□□ -1.73
TRAV1-1-201ENST00000542354 ITGBL1O95965 494 aaPredicted RBP4.25□□□□□ -1.73
TRAV1-1-201ENST00000542354 COL13A1Q5TAT6 717 aaPredicted RBP4.25□□□□□ -1.73
TRAV1-1-201ENST00000542354 LARP6Q9BRS8 491 aaKnown RBP4.25□□□□□ -1.73
TRAV1-1-201ENST00000542354 QTRT2Q9H974 415 aaKnown RBP4.25□□□□□ -1.73
TRAV1-1-201ENST00000542354 DENND4BO75064 1496 aaPredicted RBP4.24□□□□□ -1.73
TRAV1-1-201ENST00000542354 TCOF1Q13428 1488 aaKnown RBP4.24□□□□□ -1.73
TRAV1-1-201ENST00000542354 RAPGEF2Q9Y4G8 1499 aa4.24□□□□□ -1.73
TRAV1-1-201ENST00000542354 SLC4A3P48751 1232 aa4.24□□□□□ -1.73
TRAV1-1-201ENST00000542354 KCNC4Q03721 635 aa4.24□□□□□ -1.73
TRAV1-1-201ENST00000542354 NHSL1Q5SYE7 1610 aa4.24□□□□□ -1.73
TRAV1-1-201ENST00000542354 RGS12O14924 1447 aa4.23□□□□□ -1.73
TRAV1-1-201ENST00000542354 ERICH3Q5RHP9 1530 aa4.23□□□□□ -1.73
TRAV1-1-201ENST00000542354 HDGFP51858 240 aaKnown RBP4.23□□□□□ -1.73
TRAV1-1-201ENST00000542354 SF3B2Q13435 895 aaKnown RBP4.23□□□□□ -1.73
TRAV1-1-201ENST00000542354 MFSD10Q14728 455 aa4.23□□□□□ -1.73
TRAV1-1-201ENST00000542354 MAGI2Q86UL8 1455 aa4.23□□□□□ -1.73
TRAV1-1-201ENST00000542354 FRMPD1Q5SYB0 1578 aa4.23□□□□□ -1.73
TRAV1-1-201ENST00000542354 FHOD3Q2V2M9 1422 aa4.22□□□□□ -1.73
TRAV1-1-201ENST00000542354 EFCAB5A4FU69 1503 aa4.22□□□□□ -1.73
TRAV1-1-201ENST00000542354 ZFYVE16Q7Z3T8 1539 aa4.22□□□□□ -1.73
TRAV1-1-201ENST00000542354 SOWAHBA6NEL2 793 aa4.22□□□□□ -1.73
TRAV1-1-201ENST00000542354 FAM98CQ17RN3 349 aaKnown RBP4.22□□□□□ -1.73
TRAV1-1-201ENST00000542354 PACS2Q86VP3 889 aa4.22□□□□□ -1.73
TRAV1-1-201ENST00000542354 LRCH3Q96II8 777 aa4.22□□□□□ -1.73
TRAV1-1-201ENST00000542354 ADAM33Q9BZ11 813 aa4.22□□□□□ -1.73
TRAV1-1-201ENST00000542354 AFF2P51816 1311 aa4.21□□□□□ -1.73
TRAV1-1-201ENST00000542354 HSPA6P17066 643 aa4.21□□□□□ -1.74
TRAV1-1-201ENST00000542354 Q6ZNB5 142 aa4.21□□□□□ -1.74
TRAV1-1-201ENST00000542354 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.21□□□□□ -1.74
TRAV1-1-201ENST00000542354 TSR3Q9UJK0 312 aaKnown RBP4.21□□□□□ -1.74
TRAV1-1-201ENST00000542354 ATP10AO60312 1499 aa4.21□□□□□ -1.74
TRAV1-1-201ENST00000542354 NPATQ14207 1427 aa4.21□□□□□ -1.74
TRAV1-1-201ENST00000542354 DEFB132Q7Z7B7 95 aa4.2□□□□□ -1.74
TRAV1-1-201ENST00000542354 ANKLE2Q86XL3 938 aa4.2□□□□□ -1.74
TRAV1-1-201ENST00000542354 ZFRQ96KR1 1074 aaKnown RBP4.2□□□□□ -1.74
TRAV1-1-201ENST00000542354 PPP1R1BQ9UD71 204 aaPredicted RBP4.2□□□□□ -1.74
TRAV1-1-201ENST00000542354 SIGLEC1Q9BZZ2 1709 aa4.2□□□□□ -1.74
TRAV1-1-201ENST00000542354 RNF17Q9BXT8 1623 aaKnown RBP4.2□□□□□ -1.74
TRAV1-1-201ENST00000542354 C3P01024 1663 aa4.19□□□□□ -1.74
TRAV1-1-201ENST00000542354 TRIM6-TRIM34B2RNG4 842 aa4.19□□□□□ -1.74
TRAV1-1-201ENST00000542354 GGCXP38435 758 aa4.19□□□□□ -1.74
TRAV1-1-201ENST00000542354 KIAA1468Q9P260 1216 aa4.19□□□□□ -1.74
TRAV1-1-201ENST00000542354 PCDHGA10Q9Y5H3 936 aa4.19□□□□□ -1.74
TRAV1-1-201ENST00000542354 WRNQ14191 1432 aaPredicted RBP eCLIP4.19□□□□□ -1.74
TRAV1-1-201ENST00000542354 C9orf84Q5VXU9 1444 aa4.19□□□□□ -1.74
TRAV1-1-201ENST00000542354 SPDYE16A6NNV3 312 aaPredicted RBP4.18□□□□□ -1.74
TRAV1-1-201ENST00000542354 PPP4CP60510 307 aa4.18□□□□□ -1.74
TRAV1-1-201ENST00000542354 NKX1-1Q15270 411 aaPredicted RBP4.18□□□□□ -1.74
TRAV1-1-201ENST00000542354 WWC3Q9ULE0 1092 aa4.18□□□□□ -1.74
TRAV1-1-201ENST00000542354 BLMP54132 1417 aaPredicted RBP4.18□□□□□ -1.74
TRAV1-1-201ENST00000542354 CNTLNQ9NXG0 1405 aa4.18□□□□□ -1.74
TRAV1-1-201ENST00000542354 LRP6O75581 1613 aa4.17□□□□□ -1.74
TRAV1-1-201ENST00000542354 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.17□□□□□ -1.74
TRAV1-1-201ENST00000542354 EP400Q96L91 3159 aa4.17□□□□□ -1.74
TRAV1-1-201ENST00000542354 CDK13Q14004 1512 aaKnown RBP4.17□□□□□ -1.74
TRAV1-1-201ENST00000542354 NBPF26B4DH59 902 aa4.17□□□□□ -1.74
TRAV1-1-201ENST00000542354 GTPBP6O43824 516 aaPredicted RBP4.17□□□□□ -1.74
TRAV1-1-201ENST00000542354 BCAMP50895 628 aa4.17□□□□□ -1.74
TRAV1-1-201ENST00000542354 R3HDM1Q15032 1099 aaKnown RBP4.17□□□□□ -1.74
TRAV1-1-201ENST00000542354 C6orf132Q5T0Z8 1188 aa4.17□□□□□ -1.74
TRAV1-1-201ENST00000542354 PRR14Q9BWN1 585 aa4.17□□□□□ -1.74
TRAV1-1-201ENST00000542354 NWD1Q149M9 1564 aa4.17□□□□□ -1.74
TRAV1-1-201ENST00000542354 VWDEQ8N2E2 1590 aa4.17□□□□□ -1.74
TRAV1-1-201ENST00000542354 BCL9LQ86UU0 1499 aa4.17□□□□□ -1.74
TRAV1-1-201ENST00000542354 ZMYM4Q5VZL5 1548 aa4.16□□□□□ -1.74
TRAV1-1-201ENST00000542354 NINLQ9Y2I6 1382 aa4.16□□□□□ -1.74
TRAV1-1-201ENST00000542354 RICTORQ6R327 1708 aa4.16□□□□□ -1.74
TRAV1-1-201ENST00000542354 FGD6Q6ZV73 1430 aa4.16□□□□□ -1.74
TRAV1-1-201ENST00000542354 PROX2Q3B8N5 592 aa4.16□□□□□ -1.74
TRAV1-1-201ENST00000542354 HPS5Q9UPZ3 1129 aa4.16□□□□□ -1.74
TRAV1-1-201ENST00000542354 ZMYM3Q14202 1370 aa4.15□□□□□ -1.74
TRAV1-1-201ENST00000542354 AATKQ6ZMQ8 1374 aa4.15□□□□□ -1.74
TRAV1-1-201ENST00000542354 SUPT6HQ7KZ85 1726 aaKnown RBP4.15□□□□□ -1.74
TRAV1-1-201ENST00000542354 MAP3K7O43318 606 aa4.15□□□□□ -1.75
TRAV1-1-201ENST00000542354 CAMK2BQ13554 666 aa4.15□□□□□ -1.75
TRAV1-1-201ENST00000542354 ABCA8O94911 1581 aa4.14□□□□□ -1.75
TRAV1-1-201ENST00000542354 ABCA9Q8IUA7 1624 aa4.14□□□□□ -1.75
TRAV1-1-201ENST00000542354 FAM83GA6ND36 823 aa4.14□□□□□ -1.75
TRAV1-1-201ENST00000542354 NRG2O14511 850 aaPredicted RBP4.14□□□□□ -1.75
TRAV1-1-201ENST00000542354 COL9A1P20849 921 aa4.14□□□□□ -1.75
TRAV1-1-201ENST00000542354 BAG6P46379 1132 aa4.14□□□□□ -1.75
TRAV1-1-201ENST00000542354 NBR1Q14596 966 aa4.14□□□□□ -1.75
TRAV1-1-201ENST00000542354 FAM161AQ3B820 660 aa4.14□□□□□ -1.75
TRAV1-1-201ENST00000542354 FAM9AQ8IZU1 332 aaPredicted RBP4.14□□□□□ -1.75
TRAV1-1-201ENST00000542354 THEMISQ8N1K5 641 aaPredicted RBP4.14□□□□□ -1.75
TRAV1-1-201ENST00000542354 C8orf37Q96NL8 207 aa4.14□□□□□ -1.75
TRAV1-1-201ENST00000542354 IL21Q9HBE4 155 aa4.14□□□□□ -1.75
TRAV1-1-201ENST00000542354 EMILIN3Q9NT22 766 aa4.14□□□□□ -1.75
TRAV1-1-201ENST00000542354 WDR70Q9NW82 654 aa4.14□□□□□ -1.75
TRAV1-1-201ENST00000542354 WBP1LQ9NX94 342 aa4.14□□□□□ -1.75
TRAV1-1-201ENST00000542354 SLAIN2Q9P270 581 aa4.14□□□□□ -1.75
TRAV1-1-201ENST00000542354 RBM27Q9P2N5 1060 aaKnown RBP4.14□□□□□ -1.75
TRAV1-1-201ENST00000542354 TRPC5Q9UL62 973 aaPredicted RBP4.14□□□□□ -1.75
TRAV1-1-201ENST00000542354 V9GY48 417 aaPredicted RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms