RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 ANKRD36BQ8N2N9 1353 aa12.71□□□□□ -0.37
LCOR-209ENST00000540664 NINLQ9Y2I6 1382 aa12.7□□□□□ -0.38
LCOR-209ENST00000540664 CDCA7LQ96GN5 454 aa12.7□□□□□ -0.38
LCOR-209ENST00000540664 RCAN3Q9UKA8 241 aa12.7□□□□□ -0.38
LCOR-209ENST00000540664 PLEKHH1Q9ULM0 1364 aa12.7□□□□□ -0.38
LCOR-209ENST00000540664 RRP1P56182 461 aaKnown RBP12.7□□□□□ -0.38
LCOR-209ENST00000540664 SALL2Q9Y467 1007 aaPredicted RBP12.7□□□□□ -0.38
LCOR-209ENST00000540664 SHPRHQ149N8 1683 aa12.7□□□□□ -0.38
LCOR-209ENST00000540664 DLC1Q96QB1 1528 aa12.69□□□□□ -0.38
LCOR-209ENST00000540664 NSD2O96028 1365 aa12.69□□□□□ -0.38
LCOR-209ENST00000540664 B4GALNT3Q6L9W6 998 aa12.69□□□□□ -0.38
LCOR-209ENST00000540664 ESF1Q9H501 851 aaKnown RBP12.67□□□□□ -0.38
LCOR-209ENST00000540664 RIMS2Q9UQ26 1411 aa12.67□□□□□ -0.38
LCOR-209ENST00000540664 ZMYM3Q14202 1370 aa12.67□□□□□ -0.38
LCOR-209ENST00000540664 CGNL1Q0VF96 1302 aa12.67□□□□□ -0.38
LCOR-209ENST00000540664 NRXN3Q9Y4C0 1643 aa12.67□□□□□ -0.38
LCOR-209ENST00000540664 STAG3Q9UJ98 1225 aa12.66□□□□□ -0.38
LCOR-209ENST00000540664 MORC1Q86VD1 984 aa12.65□□□□□ -0.38
LCOR-209ENST00000540664 CABP2Q9NPB3 220 aa12.65□□□□□ -0.38
LCOR-209ENST00000540664 RBM19Q9Y4C8 960 aaKnown RBP12.65□□□□□ -0.38
LCOR-209ENST00000540664 ATAD2Q6PL18 1390 aa12.65□□□□□ -0.38
LCOR-209ENST00000540664 NGEFQ8N5V2 710 aa12.65□□□□□ -0.38
LCOR-209ENST00000540664 ABCC11Q96J66 1382 aa12.65□□□□□ -0.38
LCOR-209ENST00000540664 CD163L1Q9NR16 1453 aa12.65□□□□□ -0.39
LCOR-209ENST00000540664 DUSP27Q5VZP5 1158 aa12.64□□□□□ -0.39
LCOR-209ENST00000540664 TRMT2AQ8IZ69 625 aaKnown RBP12.64□□□□□ -0.39
LCOR-209ENST00000540664 PRAM1Q96QH2 718 aa12.64□□□□□ -0.39
LCOR-209ENST00000540664 STK26Q9P289 416 aa12.64□□□□□ -0.39
LCOR-209ENST00000540664 ANKRD26Q9UPS8 1709 aa12.64□□□□□ -0.39
LCOR-209ENST00000540664 MED14O60244 1454 aa12.64□□□□□ -0.39
LCOR-209ENST00000540664 A0A1W2PP64 1363 aa12.64□□□□□ -0.39
LCOR-209ENST00000540664 TRHP20396 242 aaPredicted RBP12.63□□□□□ -0.39
LCOR-209ENST00000540664 GOLGA2Q08379 1002 aa12.62□□□□□ -0.39
LCOR-209ENST00000540664 NLRP1Q9C000 1473 aa12.62□□□□□ -0.39
LCOR-209ENST00000540664 TNRQ92752 1358 aa12.62□□□□□ -0.39
LCOR-209ENST00000540664 SLFN5Q08AF3 891 aa12.62□□□□□ -0.39
LCOR-209ENST00000540664 KNDC1Q76NI1 1749 aa12.62□□□□□ -0.39
LCOR-209ENST00000540664 SAFB2Q14151 953 aaKnown RBP eCLIP12.61□□□□□ -0.39
LCOR-209ENST00000540664 UBR1Q8IWV7 1749 aa12.61□□□□□ -0.39
LCOR-209ENST00000540664 APAF1O14727 1248 aa12.61□□□□□ -0.39
LCOR-209ENST00000540664 CCDC146Q8IYE0 955 aa12.61□□□□□ -0.39
LCOR-209ENST00000540664 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.61□□□□□ -0.39
LCOR-209ENST00000540664 CCDC136Q96JN2 1154 aa12.61□□□□□ -0.39
LCOR-209ENST00000540664 POGKQ9P215 609 aa12.61□□□□□ -0.39
LCOR-209ENST00000540664 IQSEC2Q5JU85 1478 aa12.61□□□□□ -0.39
LCOR-209ENST00000540664 SRPK2P78362 688 aaKnown RBP12.6□□□□□ -0.39
LCOR-209ENST00000540664 MINK1Q8N4C8 1332 aaPredicted RBP12.6□□□□□ -0.39
LCOR-209ENST00000540664 EXOC6Q8TAG9 804 aa12.6□□□□□ -0.39
LCOR-209ENST00000540664 FER1L4A9Z1Z3 1794 aa12.59□□□□□ -0.39
LCOR-209ENST00000540664 TECPR2O15040 1411 aa12.59□□□□□ -0.39
LCOR-209ENST00000540664 MTHFSP49914 203 aa12.58□□□□□ -0.39
LCOR-209ENST00000540664 NCBP3Q53F19 620 aaKnown RBP12.58□□□□□ -0.4
LCOR-209ENST00000540664 CDK19Q9BWU1 502 aa12.58□□□□□ -0.4
LCOR-209ENST00000540664 TERF2IPQ9NYB0 399 aa12.58□□□□□ -0.4
LCOR-209ENST00000540664 C3P01024 1663 aa12.58□□□□□ -0.4
LCOR-209ENST00000540664 SIRT1Q96EB6 747 aa12.57□□□□□ -0.4
LCOR-209ENST00000540664 COL3A1P02461 1466 aaPredicted RBP12.57□□□□□ -0.4
LCOR-209ENST00000540664 NKTRP30414 1462 aaKnown RBP12.57□□□□□ -0.4
LCOR-209ENST00000540664 ATP7BP35670 1465 aa12.57□□□□□ -0.4
LCOR-209ENST00000540664 CPS1P31327 1500 aa12.57□□□□□ -0.4
LCOR-209ENST00000540664 KIF20BQ96Q89 1820 aa12.57□□□□□ -0.4
LCOR-209ENST00000540664 FAM135BQ49AJ0 1406 aa12.57□□□□□ -0.4
LCOR-209ENST00000540664 ADGRB2O60241 1585 aa12.56□□□□□ -0.4
LCOR-209ENST00000540664 METP08581 1390 aa12.56□□□□□ -0.4
LCOR-209ENST00000540664 TMEM2Q9UHN6 1383 aa12.56□□□□□ -0.4
LCOR-209ENST00000540664 E9PSI1 815 aa12.56□□□□□ -0.4
LCOR-209ENST00000540664 TNNT2P45379 298 aaPredicted RBP12.56□□□□□ -0.4
LCOR-209ENST00000540664 RUNDC1Q96C34 613 aa12.56□□□□□ -0.4
LCOR-209ENST00000540664 CFAP53Q96M91 514 aa12.56□□□□□ -0.4
LCOR-209ENST00000540664 SPINK5Q9NQ38 1064 aaPredicted RBP12.56□□□□□ -0.4
LCOR-209ENST00000540664 FYB1O15117 783 aa12.55□□□□□ -0.4
LCOR-209ENST00000540664 PLIN1O60240 522 aa12.54□□□□□ -0.4
LCOR-209ENST00000540664 HDGFP51858 240 aaKnown RBP12.54□□□□□ -0.4
LCOR-209ENST00000540664 WWC1Q8IX03 1113 aa12.54□□□□□ -0.4
LCOR-209ENST00000540664 HDGFL2Q7Z4V5 671 aaPredicted RBP12.54□□□□□ -0.4
LCOR-209ENST00000540664 WAPLQ7Z5K2 1190 aa12.54□□□□□ -0.4
LCOR-209ENST00000540664 DMRT2Q9Y5R5 561 aa12.54□□□□□ -0.4
LCOR-209ENST00000540664 CCDC27Q2M243 656 aa12.53□□□□□ -0.4
LCOR-209ENST00000540664 FANCIQ9NVI1 1328 aa12.53□□□□□ -0.4
LCOR-209ENST00000540664 CEBPAP49715 358 aaPredicted RBP12.53□□□□□ -0.4
LCOR-209ENST00000540664 CABP1Q9NZU7 370 aa12.53□□□□□ -0.4
LCOR-209ENST00000540664 CPSF1Q10570 1443 aaKnown RBP12.53□□□□□ -0.4
LCOR-209ENST00000540664 ADAMTS13Q76LX8 1427 aa12.53□□□□□ -0.4
LCOR-209ENST00000540664 PNPLA6Q8IY17 1366 aa12.52□□□□□ -0.4
LCOR-209ENST00000540664 CRBNQ96SW2 442 aa12.52□□□□□ -0.41
LCOR-209ENST00000540664 GGNBP2Q9H3C7 697 aa12.52□□□□□ -0.41
LCOR-209ENST00000540664 TCP11L2Q8N4U5 519 aa12.52□□□□□ -0.41
LCOR-209ENST00000540664 CDC42BPGQ6DT37 1551 aa12.51□□□□□ -0.41
LCOR-209ENST00000540664 WASLO00401 505 aaPredicted RBP12.51□□□□□ -0.41
LCOR-209ENST00000540664 C20orf194Q5TEA3 1177 aa12.51□□□□□ -0.41
LCOR-209ENST00000540664 PLEKHG1Q9ULL1 1385 aa12.51□□□□□ -0.41
LCOR-209ENST00000540664 WDR63Q8IWG1 891 aa12.5□□□□□ -0.41
LCOR-209ENST00000540664 MON2Q7Z3U7 1717 aa12.5□□□□□ -0.41
LCOR-209ENST00000540664 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.5□□□□□ -0.41
LCOR-209ENST00000540664 SLIT1O75093 1534 aa12.49□□□□□ -0.41
LCOR-209ENST00000540664 AKAP12Q02952 1782 aa12.49□□□□□ -0.41
LCOR-209ENST00000540664 ARHGAP23Q9P227 1491 aa12.49□□□□□ -0.41
LCOR-209ENST00000540664 EDC4Q6P2E9 1401 aaKnown RBP12.49□□□□□ -0.41
LCOR-209ENST00000540664 PPIP5K1Q6PFW1 1433 aa12.48□□□□□ -0.41
LCOR-209ENST00000540664 PLEKHF1Q96S99 279 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms