RNA–Protein interactions for RNA: ENST00000540301.1

KLHL42-203, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-203ENST00000540301 SPHKAPQ2M3C7 1700 aa12.9□□□□□ -0.34
KLHL42-203ENST00000540301 NALCNQ8IZF0 1738 aa12.9□□□□□ -0.34
KLHL42-203ENST00000540301 MARF1Q9Y4F3 1742 aaKnown RBP12.89□□□□□ -0.35
KLHL42-203ENST00000540301 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.88□□□□□ -0.35
KLHL42-203ENST00000540301 R3HDM1Q15032 1099 aaKnown RBP12.88□□□□□ -0.35
KLHL42-203ENST00000540301 KRT27Q7Z3Y8 459 aa12.88□□□□□ -0.35
KLHL42-203ENST00000540301 NRXN3Q9Y4C0 1643 aa12.88□□□□□ -0.35
KLHL42-203ENST00000540301 PTPN23Q9H3S7 1636 aa12.87□□□□□ -0.35
KLHL42-203ENST00000540301 SLIT2O94813 1529 aa12.85□□□□□ -0.35
KLHL42-203ENST00000540301 EN1Q05925 392 aaPredicted RBP12.85□□□□□ -0.35
KLHL42-203ENST00000540301 NPHP3Q7Z494 1330 aa12.85□□□□□ -0.35
KLHL42-203ENST00000540301 ONECUT3O60422 494 aaPredicted RBP12.84□□□□□ -0.35
KLHL42-203ENST00000540301 ANKRD50Q9ULJ7 1429 aa12.83□□□□□ -0.36
KLHL42-203ENST00000540301 DCAF8L1A6NGE4 600 aa12.82□□□□□ -0.36
KLHL42-203ENST00000540301 XPCQ01831 940 aaPredicted RBP12.82□□□□□ -0.36
KLHL42-203ENST00000540301 VPS72Q15906 364 aa12.82□□□□□ -0.36
KLHL42-203ENST00000540301 ESCO1Q5FWF5 840 aa12.82□□□□□ -0.36
KLHL42-203ENST00000540301 CCDC9Q9Y3X0 531 aaKnown RBP12.82□□□□□ -0.36
KLHL42-203ENST00000540301 E9PCH4 1651 aa12.81□□□□□ -0.36
KLHL42-203ENST00000540301 PXDNQ92626 1479 aa12.81□□□□□ -0.36
KLHL42-203ENST00000540301 FOXO3O43524 673 aa12.81□□□□□ -0.36
KLHL42-203ENST00000540301 SENP3-EIF4A1A0A087X0R7 540 aa12.8□□□□□ -0.36
KLHL42-203ENST00000540301 A0A0G2JS52 829 aa12.8□□□□□ -0.36
KLHL42-203ENST00000540301 MYT1Q01538 1121 aa12.8□□□□□ -0.36
KLHL42-203ENST00000540301 ZNF326Q5BKZ1 582 aaKnown RBP12.8□□□□□ -0.36
KLHL42-203ENST00000540301 VPS8Q8N3P4 1428 aa12.79□□□□□ -0.36
KLHL42-203ENST00000540301 ADGRL2O95490 1459 aa12.78□□□□□ -0.36
KLHL42-203ENST00000540301 IQGAP3Q86VI3 1631 aa12.78□□□□□ -0.36
KLHL42-203ENST00000540301 LRPPRCP42704 1394 aaKnown RBP12.78□□□□□ -0.36
KLHL42-203ENST00000540301 ROBO2Q9HCK4 1378 aa12.78□□□□□ -0.36
KLHL42-203ENST00000540301 EZH2Q15910 746 aaKnown RBP12.77□□□□□ -0.37
KLHL42-203ENST00000540301 HAP1P54257 671 aaPredicted RBP12.76□□□□□ -0.37
KLHL42-203ENST00000540301 RGPD1P0DJD0 1748 aa12.76□□□□□ -0.37
KLHL42-203ENST00000540301 DISP2A7MBM2 1401 aa12.75□□□□□ -0.37
KLHL42-203ENST00000540301 USP32Q8NFA0 1604 aa12.75□□□□□ -0.37
KLHL42-203ENST00000540301 PPP1R1BQ9UD71 204 aaPredicted RBP12.75□□□□□ -0.37
KLHL42-203ENST00000540301 SPATA31A3Q5VYP0 1347 aa12.74□□□□□ -0.37
KLHL42-203ENST00000540301 FAM98CQ17RN3 349 aaKnown RBP12.74□□□□□ -0.37
KLHL42-203ENST00000540301 FAM182BQ5T319 152 aa12.74□□□□□ -0.37
KLHL42-203ENST00000540301 ZNF784Q8NCA9 323 aaPredicted RBP12.74□□□□□ -0.37
KLHL42-203ENST00000540301 HFM1A2PYH4 1435 aa12.72□□□□□ -0.37
KLHL42-203ENST00000540301 NWD2Q9ULI1 1742 aa12.72□□□□□ -0.37
KLHL42-203ENST00000540301 CAMKK2Q96RR4 588 aa12.72□□□□□ -0.37
KLHL42-203ENST00000540301 NINLQ9Y2I6 1382 aa12.71□□□□□ -0.37
KLHL42-203ENST00000540301 PLCH1Q4KWH8 1693 aa12.71□□□□□ -0.37
KLHL42-203ENST00000540301 NUTM2FA1L443 756 aa12.71□□□□□ -0.37
KLHL42-203ENST00000540301 C1QTNF8P60827 252 aa12.71□□□□□ -0.37
KLHL42-203ENST00000540301 CABLES1Q8TDN4 633 aa12.71□□□□□ -0.37
KLHL42-203ENST00000540301 CDC42BPGQ6DT37 1551 aa12.7□□□□□ -0.38
KLHL42-203ENST00000540301 PLEKHG5O94827 1062 aa12.7□□□□□ -0.38
KLHL42-203ENST00000540301 SPON1Q9HCB6 807 aa12.7□□□□□ -0.38
KLHL42-203ENST00000540301 NEXMIFQ5QGS0 1516 aa12.7□□□□□ -0.38
KLHL42-203ENST00000540301 PRAG1Q86YV5 1406 aa12.7□□□□□ -0.38
KLHL42-203ENST00000540301 TNS1Q9HBL0 1735 aaKnown RBP12.69□□□□□ -0.38
KLHL42-203ENST00000540301 FAM83GA6ND36 823 aa12.69□□□□□ -0.38
KLHL42-203ENST00000540301 KRT28Q7Z3Y7 464 aa12.69□□□□□ -0.38
KLHL42-203ENST00000540301 NUP155O75694 1391 aa12.69□□□□□ -0.38
KLHL42-203ENST00000540301 KCNQ2O43526 872 aa12.68□□□□□ -0.38
KLHL42-203ENST00000540301 TRIM37O94972 964 aa12.68□□□□□ -0.38
KLHL42-203ENST00000540301 FAM50AQ14320 339 aaKnown RBP12.68□□□□□ -0.38
KLHL42-203ENST00000540301 NBPF8Q3BBV2 869 aa12.68□□□□□ -0.38
KLHL42-203ENST00000540301 NBPF14Q5TI25 921 aa12.68□□□□□ -0.38
KLHL42-203ENST00000540301 CCDC144AA2RUR9 1427 aa12.68□□□□□ -0.38
KLHL42-203ENST00000540301 PARD3Q8TEW0 1356 aa12.68□□□□□ -0.38
KLHL42-203ENST00000540301 APBA3O96018 575 aa12.67□□□□□ -0.38
KLHL42-203ENST00000540301 ADGRB2O60241 1585 aa12.67□□□□□ -0.38
KLHL42-203ENST00000540301 VGFO15240 615 aaPredicted RBP12.66□□□□□ -0.38
KLHL42-203ENST00000540301 APLP2Q06481 763 aa12.66□□□□□ -0.38
KLHL42-203ENST00000540301 CAMTA1Q9Y6Y1 1673 aa12.66□□□□□ -0.38
KLHL42-203ENST00000540301 NAIPQ13075 1403 aa12.65□□□□□ -0.38
KLHL42-203ENST00000540301 TNS3Q68CZ2 1445 aa12.65□□□□□ -0.38
KLHL42-203ENST00000540301 PSME1Q06323 249 aa12.65□□□□□ -0.38
KLHL42-203ENST00000540301 FAM196AQ6ZSG2 479 aa12.65□□□□□ -0.38
KLHL42-203ENST00000540301 BTG4Q9NY30 223 aa12.65□□□□□ -0.38
KLHL42-203ENST00000540301 LMOD2Q6P5Q4 547 aa12.64□□□□□ -0.39
KLHL42-203ENST00000540301 SPATA31A5Q5VU36 1347 aa12.62□□□□□ -0.39
KLHL42-203ENST00000540301 SPATA31A7Q8IWB4 1347 aa12.62□□□□□ -0.39
KLHL42-203ENST00000540301 NRAPQ86VF7 1730 aa12.62□□□□□ -0.39
KLHL42-203ENST00000540301 KIF1AQ12756 1690 aa12.62□□□□□ -0.39
KLHL42-203ENST00000540301 WAPLQ7Z5K2 1190 aa12.61□□□□□ -0.39
KLHL42-203ENST00000540301 NUP188Q5SRE5 1749 aa12.61□□□□□ -0.39
KLHL42-203ENST00000540301 RREB1Q92766 1687 aa12.61□□□□□ -0.39
KLHL42-203ENST00000540301 ABCA3Q99758 1704 aa12.6□□□□□ -0.39
KLHL42-203ENST00000540301 SBNO1A3KN83 1393 aa12.6□□□□□ -0.39
KLHL42-203ENST00000540301 ARHGEF10O15013 1369 aa12.6□□□□□ -0.39
KLHL42-203ENST00000540301 THSD7AQ9UPZ6 1657 aa12.6□□□□□ -0.39
KLHL42-203ENST00000540301 CLTCL1P53675 1640 aa12.59□□□□□ -0.39
KLHL42-203ENST00000540301 PHF8Q9UPP1 1060 aa12.59□□□□□ -0.39
KLHL42-203ENST00000540301 KIF1BO60333 1816 aa12.59□□□□□ -0.39
KLHL42-203ENST00000540301 STK26Q9P289 416 aa12.58□□□□□ -0.4
KLHL42-203ENST00000540301 ROCK1Q13464 1354 aa12.57□□□□□ -0.4
KLHL42-203ENST00000540301 FMN2Q9NZ56 1722 aa12.57□□□□□ -0.4
KLHL42-203ENST00000540301 RPGRIP1LQ68CZ1 1315 aa12.57□□□□□ -0.4
KLHL42-203ENST00000540301 COL14A1Q05707 1796 aaKnown RBP12.56□□□□□ -0.4
KLHL42-203ENST00000540301 CHD4Q14839 1912 aa12.56□□□□□ -0.4
KLHL42-203ENST00000540301 PLEKHH1Q9ULM0 1364 aa12.56□□□□□ -0.4
KLHL42-203ENST00000540301 RRBP1Q9P2E9 1410 aaKnown RBP12.55□□□□□ -0.4
KLHL42-203ENST00000540301 GIGYF1O75420 1035 aaPredicted RBP12.55□□□□□ -0.4
KLHL42-203ENST00000540301 SPATA31A1Q5TZJ5 1347 aa12.55□□□□□ -0.4
KLHL42-203ENST00000540301 TECPR2O15040 1411 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms