RNA–Protein interactions for RNA: ENST00000540139.5

CYB561A3-214, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-214ENST00000540139 CPS1P31327 1500 aa16.77■□□□□ 0.28
CYB561A3-214ENST00000540139 ASXL1Q8IXJ9 1541 aa16.77■□□□□ 0.28
CYB561A3-214ENST00000540139 TPRNQ4KMQ1 711 aa16.77■□□□□ 0.28
CYB561A3-214ENST00000540139 FAM135BQ49AJ0 1406 aa16.77■□□□□ 0.27
CYB561A3-214ENST00000540139 DLC1Q96QB1 1528 aa16.76■□□□□ 0.27
CYB561A3-214ENST00000540139 CARD11Q9BXL7 1154 aa16.76■□□□□ 0.27
CYB561A3-214ENST00000540139 XRN1Q8IZH2 1706 aaKnown RBP16.75■□□□□ 0.27
CYB561A3-214ENST00000540139 PROSER2Q86WR7 435 aaPredicted RBP16.74■□□□□ 0.27
CYB561A3-214ENST00000540139 STK26Q9P289 416 aa16.74■□□□□ 0.27
CYB561A3-214ENST00000540139 LTBP4Q8N2S1 1624 aa16.74■□□□□ 0.27
CYB561A3-214ENST00000540139 ROBO2Q9HCK4 1378 aa16.73■□□□□ 0.27
CYB561A3-214ENST00000540139 TRAK1Q9UPV9 953 aa16.72■□□□□ 0.27
CYB561A3-214ENST00000540139 EIF3AQ14152 1382 aaKnown RBP16.72■□□□□ 0.27
CYB561A3-214ENST00000540139 KNDC1Q76NI1 1749 aa16.71■□□□□ 0.27
CYB561A3-214ENST00000540139 LRRC7Q96NW7 1537 aa16.7■□□□□ 0.26
CYB561A3-214ENST00000540139 TMEM94Q12767 1356 aa16.69■□□□□ 0.26
CYB561A3-214ENST00000540139 PRAM1Q96QH2 718 aa16.69■□□□□ 0.26
CYB561A3-214ENST00000540139 POGKQ9P215 609 aa16.69■□□□□ 0.26
CYB561A3-214ENST00000540139 STRCP1A6NGW2 1772 aa16.69■□□□□ 0.26
CYB561A3-214ENST00000540139 IQSEC2Q5JU85 1478 aa16.68■□□□□ 0.26
CYB561A3-214ENST00000540139 C19orf44Q9H6X5 657 aa16.68■□□□□ 0.26
CYB561A3-214ENST00000540139 CENPJQ9HC77 1338 aaPredicted RBP16.68■□□□□ 0.26
CYB561A3-214ENST00000540139 WAPLQ7Z5K2 1190 aa16.67■□□□□ 0.26
CYB561A3-214ENST00000540139 SBNO2Q9Y2G9 1366 aa16.66■□□□□ 0.26
CYB561A3-214ENST00000540139 USP47Q96K76 1375 aa16.65■□□□□ 0.26
CYB561A3-214ENST00000540139 EIF4G2P78344 907 aaKnown RBP eCLIP16.65■□□□□ 0.26
CYB561A3-214ENST00000540139 CERKQ8TCT0 537 aa16.65■□□□□ 0.26
CYB561A3-214ENST00000540139 PLEKHH1Q9ULM0 1364 aa16.64■□□□□ 0.26
CYB561A3-214ENST00000540139 DCCP43146 1447 aa16.64■□□□□ 0.25
CYB561A3-214ENST00000540139 ADGRL3Q9HAR2 1447 aa16.64■□□□□ 0.25
CYB561A3-214ENST00000540139 MSH6P52701 1360 aa16.63■□□□□ 0.25
CYB561A3-214ENST00000540139 ST20-MTHFSA0A0A6YYL1 179 aa16.62■□□□□ 0.25
CYB561A3-214ENST00000540139 C14orf37Q86TY3 774 aa16.62■□□□□ 0.25
CYB561A3-214ENST00000540139 CADPS2Q86UW7 1296 aa16.62■□□□□ 0.25
CYB561A3-214ENST00000540139 ARHGEF28Q8N1W1 1705 aaKnown RBP16.62■□□□□ 0.25
CYB561A3-214ENST00000540139 PUS7Q96PZ0 661 aaKnown RBP16.61■□□□□ 0.25
CYB561A3-214ENST00000540139 ATF3P18847 181 aa16.6■□□□□ 0.25
CYB561A3-214ENST00000540139 TESK2Q96S53 571 aa16.6■□□□□ 0.25
CYB561A3-214ENST00000540139 WASLO00401 505 aaPredicted RBP16.59■□□□□ 0.25
CYB561A3-214ENST00000540139 VASPP50552 380 aaPredicted RBP16.59■□□□□ 0.25
CYB561A3-214ENST00000540139 RBM33Q96EV2 1170 aaKnown RBP16.59■□□□□ 0.25
CYB561A3-214ENST00000540139 HSPA5P11021 654 aaKnown RBP16.58■□□□□ 0.24
CYB561A3-214ENST00000540139 SAFB2Q14151 953 aaKnown RBP eCLIP16.58■□□□□ 0.24
CYB561A3-214ENST00000540139 EVC2Q86UK5 1308 aa16.58■□□□□ 0.24
CYB561A3-214ENST00000540139 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.57■□□□□ 0.24
CYB561A3-214ENST00000540139 ADGRB2O60241 1585 aa16.57■□□□□ 0.24
CYB561A3-214ENST00000540139 MINK1Q8N4C8 1332 aaPredicted RBP16.57■□□□□ 0.24
CYB561A3-214ENST00000540139 XIRP1Q702N8 1843 aaKnown RBP16.56■□□□□ 0.24
CYB561A3-214ENST00000540139 TOM1O60784 492 aa16.56■□□□□ 0.24
CYB561A3-214ENST00000540139 CDCA8Q53HL2 280 aa16.56■□□□□ 0.24
CYB561A3-214ENST00000540139 CDC42BPGQ6DT37 1551 aa16.55■□□□□ 0.24
CYB561A3-214ENST00000540139 TMF1P82094 1093 aa16.55■□□□□ 0.24
CYB561A3-214ENST00000540139 CDK19Q9BWU1 502 aa16.54■□□□□ 0.24
CYB561A3-214ENST00000540139 SLAIN2Q9P270 581 aa16.54■□□□□ 0.24
CYB561A3-214ENST00000540139 ANKARQ7Z5J8 1434 aa16.53■□□□□ 0.24
CYB561A3-214ENST00000540139 HIRIP3Q9BW71 556 aaPredicted RBP16.53■□□□□ 0.24
CYB561A3-214ENST00000540139 NALCNQ8IZF0 1738 aa16.52■□□□□ 0.24
CYB561A3-214ENST00000540139 QRICH2Q9H0J4 1663 aa16.52■□□□□ 0.23
CYB561A3-214ENST00000540139 SAMD1Q6SPF0 538 aaPredicted RBP16.51■□□□□ 0.23
CYB561A3-214ENST00000540139 IFNLR1Q8IU57 520 aaPredicted RBP16.51■□□□□ 0.23
CYB561A3-214ENST00000540139 CCDC61Q9Y6R9 512 aa16.51■□□□□ 0.23
CYB561A3-214ENST00000540139 MST1RQ04912 1400 aa16.5■□□□□ 0.23
CYB561A3-214ENST00000540139 ATAD2Q6PL18 1390 aa16.5■□□□□ 0.23
CYB561A3-214ENST00000540139 UBAP1LF5GYI3 381 aa16.49■□□□□ 0.23
CYB561A3-214ENST00000540139 SRPK2P78362 688 aaKnown RBP16.49■□□□□ 0.23
CYB561A3-214ENST00000540139 PROM2Q8N271 834 aa16.49■□□□□ 0.23
CYB561A3-214ENST00000540139 NUDT16Q96DE0 195 aaKnown RBP16.49■□□□□ 0.23
CYB561A3-214ENST00000540139 TULP4Q9NRJ4 1543 aa16.49■□□□□ 0.23
CYB561A3-214ENST00000540139 C1orf167Q5SNV9 1468 aa16.48■□□□□ 0.23
CYB561A3-214ENST00000540139 PLEKHG3A1L390 1219 aa16.47■□□□□ 0.23
CYB561A3-214ENST00000540139 SPDYE4A6NLX3 237 aa16.47■□□□□ 0.23
CYB561A3-214ENST00000540139 CABP2Q9NPB3 220 aa16.47■□□□□ 0.23
CYB561A3-214ENST00000540139 PRR36Q9H6K5 1346 aa16.46■□□□□ 0.23
CYB561A3-214ENST00000540139 FMN2Q9NZ56 1722 aa16.46■□□□□ 0.23
CYB561A3-214ENST00000540139 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.46■□□□□ 0.23
CYB561A3-214ENST00000540139 NINLQ9Y2I6 1382 aa16.46■□□□□ 0.23
CYB561A3-214ENST00000540139 BBXQ8WY36 941 aaPredicted RBP16.45■□□□□ 0.22
CYB561A3-214ENST00000540139 DISP3Q9P2K9 1392 aa16.45■□□□□ 0.22
CYB561A3-214ENST00000540139 ATP7BP35670 1465 aa16.44■□□□□ 0.22
CYB561A3-214ENST00000540139 ESCO1Q5FWF5 840 aa16.44■□□□□ 0.22
CYB561A3-214ENST00000540139 BRINP3Q76B58 766 aa16.44■□□□□ 0.22
CYB561A3-214ENST00000540139 PHF8Q9UPP1 1060 aa16.43■□□□□ 0.22
CYB561A3-214ENST00000540139 ORAI2Q96SN7 254 aa16.42■□□□□ 0.22
CYB561A3-214ENST00000540139 NUTM2FA1L443 756 aa16.41■□□□□ 0.22
CYB561A3-214ENST00000540139 C11orf95C9JLR9 678 aaPredicted RBP16.41■□□□□ 0.22
CYB561A3-214ENST00000540139 ZNF692Q9BU19 519 aaPredicted RBP16.41■□□□□ 0.22
CYB561A3-214ENST00000540139 CABP1Q9NZU7 370 aa16.41■□□□□ 0.22
CYB561A3-214ENST00000540139 POLR3AO14802 1390 aaPredicted RBP16.4■□□□□ 0.22
CYB561A3-214ENST00000540139 FBXO41Q8TF61 875 aa16.4■□□□□ 0.22
CYB561A3-214ENST00000540139 NPHP3Q7Z494 1330 aa16.4■□□□□ 0.22
CYB561A3-214ENST00000540139 BRD4O60885 1362 aaPredicted RBP16.39■□□□□ 0.21
CYB561A3-214ENST00000540139 PPIP5K1Q6PFW1 1433 aa16.39■□□□□ 0.21
CYB561A3-214ENST00000540139 USP32Q8NFA0 1604 aa16.39■□□□□ 0.21
CYB561A3-214ENST00000540139 KIF7Q2M1P5 1343 aa16.39■□□□□ 0.21
CYB561A3-214ENST00000540139 TERF2IPQ9NYB0 399 aa16.38■□□□□ 0.21
CYB561A3-214ENST00000540139 CCDC7Q96M83 1385 aa16.38■□□□□ 0.21
CYB561A3-214ENST00000540139 PIP4K2BP78356 416 aa16.37■□□□□ 0.21
CYB561A3-214ENST00000540139 NGDNQ8NEJ9 315 aaKnown RBP16.37■□□□□ 0.21
CYB561A3-214ENST00000540139 SLC12A5Q9H2X9 1139 aa16.37■□□□□ 0.21
CYB561A3-214ENST00000540139 KIF1AQ12756 1690 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms