RNA–Protein interactions for RNA: ENST00000539927.1

C1RL-207, Transcript of complement C1r subcomponent like, humanhuman

TSL 2

Gene C1RL, Length 354 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-207ENST00000539927 COL22A1Q8NFW1 1626 aaPredicted RBP29.23■■■□□ 2.27
C1RL-207ENST00000539927 CDC42BPGQ6DT37 1551 aa29.22■■■□□ 2.27
C1RL-207ENST00000539927 RGL3Q3MIN7 710 aa29.2■■■□□ 2.26
C1RL-207ENST00000539927 ESCO1Q5FWF5 840 aa29.2■■■□□ 2.26
C1RL-207ENST00000539927 ADGRF5Q8IZF2 1346 aa29.2■■■□□ 2.26
C1RL-207ENST00000539927 RGPD8O14715 1765 aaPredicted RBP29.19■■■□□ 2.26
C1RL-207ENST00000539927 STK26Q9P289 416 aa29.19■■■□□ 2.26
C1RL-207ENST00000539927 USP21Q9UK80 565 aa29.19■■■□□ 2.26
C1RL-207ENST00000539927 CCDC144AA2RUR9 1427 aa29.19■■■□□ 2.26
C1RL-207ENST00000539927 KNDC1Q76NI1 1749 aa29.18■■■□□ 2.26
C1RL-207ENST00000539927 NUTM2FA1L443 756 aa29.15■■■□□ 2.26
C1RL-207ENST00000539927 XPCQ01831 940 aaPredicted RBP29.14■■■□□ 2.26
C1RL-207ENST00000539927 WAPLQ7Z5K2 1190 aa29.14■■■□□ 2.26
C1RL-207ENST00000539927 NPHP3Q7Z494 1330 aa29.14■■■□□ 2.25
C1RL-207ENST00000539927 FMN2Q9NZ56 1722 aa29.12■■■□□ 2.25
C1RL-207ENST00000539927 TRPC5Q9UL62 973 aaPredicted RBP29.12■■■□□ 2.25
C1RL-207ENST00000539927 PXDNQ92626 1479 aa29.11■■■□□ 2.25
C1RL-207ENST00000539927 FOXO3O43524 673 aa29.11■■■□□ 2.25
C1RL-207ENST00000539927 TMEM132EQ6IEE7 984 aa29.1■■■□□ 2.25
C1RL-207ENST00000539927 SPATA31E1Q6ZUB1 1445 aa29.1■■■□□ 2.25
C1RL-207ENST00000539927 MPHOSPH9Q99550 1183 aa29.09■■■□□ 2.25
C1RL-207ENST00000539927 MYOM2P54296 1465 aa29.09■■■□□ 2.25
C1RL-207ENST00000539927 FNBP4Q8N3X1 1017 aaPredicted RBP29.08■■■□□ 2.25
C1RL-207ENST00000539927 ANKRD30BQ9BXX2 1392 aa29.08■■■□□ 2.25
C1RL-207ENST00000539927 TECPR2O15040 1411 aa29.07■■■□□ 2.24
C1RL-207ENST00000539927 LRPPRCP42704 1394 aaKnown RBP29.07■■■□□ 2.24
C1RL-207ENST00000539927 ATRNO75882 1429 aa29.06■■■□□ 2.24
C1RL-207ENST00000539927 ATAD2Q6PL18 1390 aa29.06■■■□□ 2.24
C1RL-207ENST00000539927 PLEKHH1Q9ULM0 1364 aa29.06■■■□□ 2.24
C1RL-207ENST00000539927 KIF1AQ12756 1690 aa29.05■■■□□ 2.24
C1RL-207ENST00000539927 EP400Q96L91 3159 aa29.03■■■□□ 2.24
C1RL-207ENST00000539927 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.03■■■□□ 2.24
C1RL-207ENST00000539927 PIK3C2GO75747 1445 aa29.03■■■□□ 2.24
C1RL-207ENST00000539927 ABCC11Q96J66 1382 aa29.02■■■□□ 2.24
C1RL-207ENST00000539927 YTHDC2Q9H6S0 1430 aaKnown RBP29.01■■■□□ 2.23
C1RL-207ENST00000539927 BRWD3Q6RI45 1802 aa28.99■■■□□ 2.23
C1RL-207ENST00000539927 BCL9LQ86UU0 1499 aa28.99■■■□□ 2.23
C1RL-207ENST00000539927 USP32Q8NFA0 1604 aa28.94■■■□□ 2.22
C1RL-207ENST00000539927 KRT28Q7Z3Y7 464 aa28.93■■■□□ 2.22
C1RL-207ENST00000539927 SPATA31A3Q5VYP0 1347 aa28.93■■■□□ 2.22
C1RL-207ENST00000539927 PLEKHG5O94827 1062 aa28.92■■■□□ 2.22
C1RL-207ENST00000539927 GJD4Q96KN9 370 aaPredicted RBP28.92■■■□□ 2.22
C1RL-207ENST00000539927 ABCA3Q99758 1704 aa28.91■■■□□ 2.22
C1RL-207ENST00000539927 PLCH1Q4KWH8 1693 aa28.9■■■□□ 2.22
C1RL-207ENST00000539927 GLI3P10071 1580 aa28.9■■■□□ 2.22
C1RL-207ENST00000539927 SAFB2Q14151 953 aaKnown RBP eCLIP28.9■■■□□ 2.22
C1RL-207ENST00000539927 CFAP70Q5T0N1 1121 aa28.9■■■□□ 2.22
C1RL-207ENST00000539927 C14orf93Q9H972 538 aaKnown RBP28.9■■■□□ 2.22
C1RL-207ENST00000539927 DHX57Q6P158 1386 aaKnown RBP28.88■■■□□ 2.21
C1RL-207ENST00000539927 HAP1P54257 671 aaPredicted RBP28.88■■■□□ 2.21
C1RL-207ENST00000539927 SRCAPQ6ZRS2 3230 aa28.87■■■□□ 2.21
C1RL-207ENST00000539927 UNC5CLQ8IV45 518 aa28.87■■■□□ 2.21
C1RL-207ENST00000539927 PHF8Q9UPP1 1060 aa28.87■■■□□ 2.21
C1RL-207ENST00000539927 SLIT2O94813 1529 aa28.86■■■□□ 2.21
C1RL-207ENST00000539927 NWD2Q9ULI1 1742 aa28.86■■■□□ 2.21
C1RL-207ENST00000539927 NRXN1Q9ULB1 1477 aa28.85■■■□□ 2.21
C1RL-207ENST00000539927 SIRT1Q96EB6 747 aa28.85■■■□□ 2.21
C1RL-207ENST00000539927 RALGAPBQ86X10 1494 aa28.85■■■□□ 2.21
C1RL-207ENST00000539927 LMOD2Q6P5Q4 547 aa28.84■■■□□ 2.21
C1RL-207ENST00000539927 PRAM1Q96QH2 718 aa28.84■■■□□ 2.21
C1RL-207ENST00000539927 TNS3Q68CZ2 1445 aa28.84■■■□□ 2.21
C1RL-207ENST00000539927 PSME1Q06323 249 aa28.83■■■□□ 2.21
C1RL-207ENST00000539927 CABLES1Q8TDN4 633 aa28.83■■■□□ 2.21
C1RL-207ENST00000539927 ZRANB1Q9UGI0 708 aa28.81■■■□□ 2.2
C1RL-207ENST00000539927 POGKQ9P215 609 aa28.8■■■□□ 2.2
C1RL-207ENST00000539927 ACIN1Q9UKV3 1341 aaKnown RBP28.79■■■□□ 2.2
C1RL-207ENST00000539927 CCDC125Q86Z20 511 aa28.79■■■□□ 2.2
C1RL-207ENST00000539927 PMFBP1Q8TBY8 1022 aa28.78■■■□□ 2.2
C1RL-207ENST00000539927 CCDC9Q9Y3X0 531 aaKnown RBP28.77■■■□□ 2.2
C1RL-207ENST00000539927 DLC1Q96QB1 1528 aa28.76■■■□□ 2.19
C1RL-207ENST00000539927 TRPM3Q9HCF6 1732 aaPredicted RBP28.76■■■□□ 2.19
C1RL-207ENST00000539927 ADGRB2O60241 1585 aa28.75■■■□□ 2.19
C1RL-207ENST00000539927 SBNO1A3KN83 1393 aa28.75■■■□□ 2.19
C1RL-207ENST00000539927 RAB3GAP2Q9H2M9 1393 aa28.74■■■□□ 2.19
C1RL-207ENST00000539927 ARHGEF10O15013 1369 aa28.73■■■□□ 2.19
C1RL-207ENST00000539927 SEPT12Q8IYM1 358 aa28.72■■■□□ 2.19
C1RL-207ENST00000539927 HIRIP3Q9BW71 556 aaPredicted RBP28.72■■■□□ 2.19
C1RL-207ENST00000539927 TRAK1Q9UPV9 953 aa28.72■■■□□ 2.19
C1RL-207ENST00000539927 ADGRB1O14514 1584 aa28.71■■■□□ 2.19
C1RL-207ENST00000539927 ALS2Q96Q42 1657 aa28.71■■■□□ 2.19
C1RL-207ENST00000539927 VPS72Q15906 364 aa28.71■■■□□ 2.19
C1RL-207ENST00000539927 KDM2AQ9Y2K7 1162 aa28.71■■■□□ 2.19
C1RL-207ENST00000539927 NRAPQ86VF7 1730 aa28.71■■■□□ 2.19
C1RL-207ENST00000539927 BLMP54132 1417 aaPredicted RBP28.7■■■□□ 2.19
C1RL-207ENST00000539927 ANKARQ7Z5J8 1434 aa28.7■■■□□ 2.19
C1RL-207ENST00000539927 MINK1Q8N4C8 1332 aaPredicted RBP28.69■■■□□ 2.18
C1RL-207ENST00000539927 ITSN1Q15811 1721 aa28.66■■■□□ 2.18
C1RL-207ENST00000539927 A0A0G2JS52 829 aa28.66■■■□□ 2.18
C1RL-207ENST00000539927 FAM83GA6ND36 823 aa28.66■■■□□ 2.18
C1RL-207ENST00000539927 MYT1Q01538 1121 aa28.66■■■□□ 2.18
C1RL-207ENST00000539927 DEFB132Q7Z7B7 95 aa28.66■■■□□ 2.18
C1RL-207ENST00000539927 COL14A1Q05707 1796 aaKnown RBP28.65■■■□□ 2.18
C1RL-207ENST00000539927 SF3B2Q13435 895 aaKnown RBP28.65■■■□□ 2.18
C1RL-207ENST00000539927 ARHGEF28Q8N1W1 1705 aaKnown RBP28.65■■■□□ 2.18
C1RL-207ENST00000539927 CRYBG1Q9Y4K1 1723 aa28.64■■■□□ 2.18
C1RL-207ENST00000539927 DCAF11Q8TEB1 546 aa28.64■■■□□ 2.18
C1RL-207ENST00000539927 TULP4Q9NRJ4 1543 aa28.63■■■□□ 2.17
C1RL-207ENST00000539927 GPRASP1Q5JY77 1395 aa28.62■■■□□ 2.17
C1RL-207ENST00000539927 KRT27Q7Z3Y8 459 aa28.62■■■□□ 2.17
C1RL-207ENST00000539927 PRR36Q9H6K5 1346 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms